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1.
Fungal Genet Biol ; 164: 103752, 2023 01.
Artigo em Inglês | MEDLINE | ID: mdl-36435348

RESUMO

Ultraviolet (UV) light is a mutagen that causes DNA damage. Some UV-sensitive Neurospora crassa strains have been reported to exhibit a partial photoreactivation defect (PPD) phenotype, and the possible cause of this has been unknown for more than half a century. In this study, in the process of elucidating the possible causes of a PPD phenotype, we discovered that the XPF homologue MUS-38 is involved in repairing the UV-induced DNA interstrand crosslink (ICL) in N. crassa. Furthermore, the sensitivity of the Δmus-38 and Δmus-44 strains to ICL agents was significantly higher than that of other nucleotide excision repair (NER)-related gene knockout (KO) strains, indicating that the MUS-38/MUS-44 complex is involved in an NER-independent ICL repair mechanism. Based on reports concerning the mammalian homologues XPF and ERCC1 we obtained separation-of-function mutants defective only in NER in mus-38 and mus-44. Additionally, the photoreactivation ability of these mutants was significantly higher than that of the KO strains. These results indicate that the PPD phenotype is caused by a defect in the repair-ability of ICL induced by UV and that an NER-independent ICL repair by MUS-38 and MUS-44 confers resistance to UV in N. crassa.


Assuntos
Neurospora crassa , Animais , Neurospora crassa/genética , Neurospora crassa/metabolismo , Reparo do DNA/genética , Dano ao DNA/genética , DNA , Mutagênicos , Endonucleases/genética , Endonucleases/metabolismo , Raios Ultravioleta , Mamíferos/genética , Mamíferos/metabolismo
2.
Fungal Biol ; 126(11-12): 826-833, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-36517150

RESUMO

The mhg1 (NCU02695/ada-23) gene encodes the mitochondrial high-mobility group box (HMG-box or HMGB) protein in Neurospora crassa. The mhg1 KO strain (mhg1KO) has mitochondrial DNA (mtDNA) instability and a short lifespan; however, the function of MHG1 remains unclear. To investigate the role of this protein in the maintenance of mtDNA, domain deleted MHG1 proteins were expressed in the mhg1KO strain, and their effects were analyzed. We identified two putative HMG-domains, HMGBI and HMGBII. Although deletion of the HMG-box did not abolish MHG1's mitochondrial localization, the mhg1KO phenotype of a severe growth defect and a high sensitivity to mutagens could not be restored by introduction of HMG-box deleted mhg1 gene into the KO strain. It was indicated that recombinant full-length MHG1, i.e., mitochondrial targeting sequence (MTS) containing protein, did not exhibit explicit DNA binding, whereas the MHG1 protein truncated for the MTS sequence did in vitro by an electrophoretic mobility shift assay. Furthermore, recombinant MHG1 protein lacking MTS and HMG-domains, either HMGBI or HMGBII, had DNA affinity and an altered band shift pattern compared with MTS-truncated MHG1 protein. These results suggest that cleavage of MTS and appropriate DNA binding via HMG-domains are indispensable for maintaining mtDNA in N. crassa.


Assuntos
Neurospora crassa , Neurospora crassa/genética , Neurospora crassa/metabolismo , DNA Mitocondrial/genética , Mitocôndrias/genética , Mitocôndrias/metabolismo , Domínios Proteicos , Proteínas Mitocondriais/genética , Proteínas Mitocondriais/metabolismo
3.
Genes Genet Syst ; 95(6): 281-289, 2021 Mar 23.
Artigo em Inglês | MEDLINE | ID: mdl-33551431

RESUMO

Photoreactivation is a mechanism in which photolyase directly repairs either cyclobutane pyrimidine dimers (CPDs) or (6-4) photoproducts [(6-4) PPs] caused by ultraviolet (UV) light. In the filamentous fungus Neurospora crassa, some UV-sensitive mutants such as mus-44 have been reported to exhibit a partial photoreactivation defect (PPD) phenotype, but its mechanism has not been elucidated for a long time. In this study, the N. crassa CPD photolyase PHR was overexpressed in the Δmus-44 strain, but photoreactivation ability was not increased. Furthermore, Escherichia coli CPD photolyase or Arabidopsis thaliana (6-4) PP photolyase was also introduced into Δmus-44; however, the PPD phenotype was not complemented. These results suggested that the PPD phenotype in N. crassa is not caused by residual unrepaired pyrimidine dimers, which are the main type of DNA damage caused by UV irradiation. Finally, we revealed that Δmus-44, but not the Δmus-43 strain, which does not show the PPD phenotype, displayed higher sensitivity with increasing dose rate of UV. Moreover, Δmus-44 was also sensitive to an interstrand crosslinking agent. This indicates that the high dose of UV in our experimental condition induces DNA damage other than pyrimidine dimers, and that such damage is a likely cause of the PPD phenotype.


Assuntos
Reparo do DNA , Desoxirribodipirimidina Fotoliase/metabolismo , Proteínas Fúngicas/metabolismo , Neurospora crassa/genética , Dímeros de Pirimidina/genética , Tolerância a Radiação , Proteínas de Arabidopsis/genética , Proteínas de Arabidopsis/metabolismo , Desoxirribodipirimidina Fotoliase/genética , Proteínas Fúngicas/genética , Fenótipo , Transgenes , Raios Ultravioleta
4.
Fungal Genet Biol ; 144: 103465, 2020 11.
Artigo em Inglês | MEDLINE | ID: mdl-32949723

RESUMO

Wild-type filamentous fungus Neurospora crassa continues to grow its hyphae for a very lengthy period of time (>2 years), whereas mutations at the natural death (nd) locus shorten life span (approximately 20 days). By positional cloning based on heat augmented mutagen sensitivity of the nd strain, we identified a nonsense mutation in the msh1 gene, an eukaryotic homolog of bacterial MutS, and this mutation resulted in encoding non-functional polypeptide. By tagging with GFP, subcellular localization of the MSH1 protein in the mitochondria was observed, and knock out of the msh1 gene caused severe growth deficiency accompanying mitochondrial DNA (mtDNA) aberrations such as large-scale mtDNA deletions and rearrangements as seen in the nd strain. These results suggested that MSH1 may maintain mtDNA integrity. Thus, loss of function compromises mtDNA, leading to the acceleration of cellular aging.


Assuntos
DNA Mitocondrial/genética , Hifas/genética , Longevidade/genética , Proteínas MutS/genética , Sequência de Aminoácidos/genética , Códon sem Sentido/genética , Proteínas de Ligação a DNA/genética , Hifas/crescimento & desenvolvimento , Mitocôndrias/genética , Mitocôndrias/metabolismo , Neurospora crassa/genética , Neurospora crassa/crescimento & desenvolvimento , Recombinação Genética/genética , Saccharomyces cerevisiae/genética
5.
Genes Genet Syst ; 95(4): 173-182, 2020 Oct 23.
Artigo em Inglês | MEDLINE | ID: mdl-32848122

RESUMO

T-DNA integration into plant chromosomal DNA via Agrobacterium tumefaciens can be achieved by exploiting the double-strand break repair system of the host's DNA. However, the detailed mechanism of T-DNA integration remains unclear. Here, a sequence analysis of the junction sequences of T-DNA and chromosomal DNA was performed to assess the mechanism of T-DNA integration. T-DNA was introduced into Arabidopsis wild-type and NHEJ-deficient ku80 mutant plants using the floral dip method; the junctions of the left border (LB) of T-DNA were subsequently analyzed by adapter PCR. The most frequent junction of the LB of T-DNA with chromosomal DNA was of the filler DNA type in both lines. The lengths of direct or inverted repeat sequences within or around the filler DNA sequence were greater in the ku80 mutant. In addition, the frequency of T-DNA integration near a transcription start site was significantly higher in the ku80 mutant. Our observations suggest that the presence of the Ku80 protein affects the location of the integration of T-DNA and the pattern of formation of repeat sequences within or around the filler DNA during LB integration into chromosomal DNA.


Assuntos
Proteínas de Arabidopsis/genética , Cromossomos de Plantas/genética , DNA Helicases/genética , DNA Bacteriano/genética , Recombinação Genética , Agrobacterium tumefaciens/genética , Arabidopsis , Deleção de Genes
6.
Fungal Biol ; 124(7): 613-618, 2020 07.
Artigo em Inglês | MEDLINE | ID: mdl-32540184

RESUMO

Most fungi are multinucleated organisms. In some fungi, they have asynchronous nuclei in the same cytoplasm. We analyzed a cell-cycle regulation mechanism using a model fungus Neurospora crassa, which can make heterokaryon cells. G1/S cyclin CLN-1 and cyclin-dependent kinase CDC-2 were tagged with different fluorescence in different strains and expressed. By forming a heterokaryon strain of these, two different fluorescence-tagged proteins were expressed in the same cytoplasm. CDC-2 was localized in all nuclei, whereas CLN-1 was not detected in most of the nuclei and was dispersed in the cytoplasm with small granular clusters. This indicates that in multinucleated fungi, cell-cycle regulators, similar to other proteins, are shared around the nuclei regardless of different cell-cycle stages. Moreover, each nucleus can select and use a special cell-cycle regulator only when it is necessary. Fungal nuclei may have a novel pickup mechanism of necessary proteins from their cytoplasm at the point of use.


Assuntos
Proteínas de Ciclo Celular , Proteínas Fúngicas , Neurospora crassa , Proteína Quinase CDC2/metabolismo , Ciclo Celular , Proteínas de Ciclo Celular/genética , Proteínas de Ciclo Celular/metabolismo , Núcleo Celular/metabolismo , Citoplasma/metabolismo , Proteínas Fúngicas/genética , Proteínas Fúngicas/metabolismo , Neurospora crassa/citologia , Neurospora crassa/genética , Neurospora crassa/metabolismo
7.
Int J Radiat Biol ; 94(12): 1125-1133, 2018 12.
Artigo em Inglês | MEDLINE | ID: mdl-30307372

RESUMO

PURPOSE: To assess the unique biological effects of different forms of ionizing radiation causing DNA double-strand breaks (DSBs), we compared the killing effect, mutagenesis frequency, and mutation type spectrum using the model filamentous fungus Neurospora. MATERIALS AND METHODS: Asexual spores of wild-type Neurospora and two DSB repair-deficient strains [one homologous recombination- and the other non-homologous end-joining (NHEJ) pathway-deficient] were irradiated with argon (Ar)-ion beams, ferrous (Fe)-ion beams, or X-rays. Relative biological effectiveness (RBE), forward mutation frequencies at the ad-3 loci, and mutation spectra at the ad-3B gene were determined. RESULTS: The canonical NHEJ (cNHEJ)-deficient strain showed resistance to higher X-ray doses, while other strains showed dose-dependent sensitivity. In contrast, the killing effects of Ar-ion and Fe-ion beam irradiation were dose-dependent in all strains tested. The rank order of RBE was Ar-ion > Fe-ion > C-ion. Deletion mutations were the most common, but deletion size incremented with the increasing value of linear energy transfer (LET). CONCLUSIONS: We found marked differences in killing effect of a cNHEJ-deficient mutant between X-ray and high-LET ion beam irradiations (Ar and Fe). The mutation spectra also differed between irradiation types. These differences may be due to the physical properties of each radiation and the repair mechanism of induced damage in Neurospora crassa. These results may guide the choice of irradiation beam to kill or mutagenize fungi for agricultural applications or further research.


Assuntos
Transferência Linear de Energia , Mutagênese/efeitos da radiação , Neurospora crassa/genética , Neurospora crassa/efeitos da radiação , Íons Pesados/efeitos adversos , Mutação/efeitos da radiação , Análise de Sobrevida , Raios X/efeitos adversos
8.
Fungal Genet Biol ; 105: 28-36, 2017 08.
Artigo em Inglês | MEDLINE | ID: mdl-28602830

RESUMO

To elucidate genetic mechanisms affecting the lifespan of the filamentous fungus Neurospora crassa, we attempted to identify a gene of which a defect causes a short-lifespan. By screening a Neurospora knockout library, provided by the Fungal Genetics Stock Center at Kansas State University, several KO strains with a short-lifespan were isolated. FGSC#11693 is one of these, which shows similar phenotypes to known Neurospora short-lifespan mutants as follows: 1) hyphal growth ceases after about 2weeks of cultivation, despite that of the wild-type continuing for over 2years, 2) viability of conidia is lower than that of the wild-type, and 3) high sensitivity to mutagens such as methyl methanesulfonate, ultraviolet radiation, and hydroxyl urea is exhibited. The NCU number of the knocked-out gene in the KO strain is NCU02695, and recovery from the short-lifespan and mutagen sensitivity was achieved by the introduction of this gene from the wild-type. The putative amino acid sequence of the knocked-out gene contains two high mobility group box domains and a mitochondrial localization signal is found at the N-terminal of this sequence. Upon analyzing the subcellular localization of the gene product fused with GFP, GFP signals were detected in mitochondria. From these observations, the gene and KO strain were named mitochondrial high mobility group box protein 1 (MHG1) and mhg1KO strain, respectively. The amount of mtDNA relative to the nuclear amount was lower in the mhg1KO strain than in the wild-type. mtDNA aberration was also observed in the mhg1KO strain. These results suggest that the MHG1 protein plays an important role in the maintenance of mitochondrial DNA, and mitochondrial abnormality caused by mtDNA aberration is responsible for the short-lifespan of the mhg1KO strain.


Assuntos
DNA Fúngico/metabolismo , DNA Mitocondrial/metabolismo , Proteínas Fúngicas/genética , Proteínas HMGB/genética , Neurospora crassa/genética , Sequência de Aminoácidos , Proteínas Fúngicas/metabolismo , Técnicas de Silenciamento de Genes , Genes Fúngicos , Proteínas HMGB/metabolismo , Longevidade/genética , Mutagênicos/farmacologia , Neurospora crassa/efeitos dos fármacos , Neurospora crassa/isolamento & purificação , Neurospora crassa/metabolismo , Fenótipo , Domínios Proteicos
9.
Fungal Biol ; 117(4): 227-38, 2013 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-23622717

RESUMO

Heavy-ion beams are known to cause great damage to cellular components and are particularly renowned for their ability to generate DNA double-strand breaks (DSBs). To gain insight into the mutagenic effect of carbon-ion beams and how such damage is repaired by the cell, Neurospora crassa mutants deficient in one of three components involved in the repair of DSBs, nonhomologous end-joining (NHEJ), homologous recombination repair (HR), and the Mre11-Rad50-Xrs2 (MRX) complex, were irradiated with a carbon-ion beam and killing effect, mutation frequencies, and the type of mutation incurred by survivors were analysed. The sensitivity of the NHEJ-deficient strain (mus-52) was higher than that of the wild-type and the HR-deficient (mei-3) strains at low doses of radiation, but was little changed as the level increased. As a result both the wild-type and HR-deficient strains were more sensitive than the NHEJ-deficient strain at high radiation levels. In addition, the frequency of forward mutation at the adenine-3 (ad-3) loci of the NHEJ-deficient mutant was lower than that of the wild-type strain at all levels, while the mutation frequency of the HR-deficient strain was consistently ∼3-fold higher than the wild-type. From the comparison of mutation type of each strain, deletions were frequently observed in wild-type strain, whilst base substitution and deletion in the mus-52 and mei-3 strains. These mutations resulting from carbon-ion-beam irradiation depend on the mechanism invoked to cope with DSBs. Furthermore, in wild-type cells, these mechanisms likely compete to repair DSBs.


Assuntos
Mutação , Neurospora crassa/genética , Neurospora crassa/efeitos da radiação , Radiação Ionizante , Carbono , Quebras de DNA de Cadeia Dupla/efeitos da radiação , Reparo do DNA , DNA Fúngico/química , DNA Fúngico/genética , Fungos/genética , Fungos/efeitos da radiação , Íons , Viabilidade Microbiana/efeitos da radiação , Dados de Sequência Molecular , Taxa de Mutação , Neurospora crassa/fisiologia , Análise de Sequência de DNA
10.
Eukaryot Cell ; 12(2): 233-43, 2013 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-23223037

RESUMO

Mitochondria are highly dynamic organelles that continuously fuse and divide. To maintain mitochondria, cells establish an equilibrium of fusion and fission events, which are mediated by dynamin-like GTPases. We previously showed that an mus-10 strain, a mutagen-sensitive strain of the filamentous fungus Neurospora crassa, is defective in an F-box protein that is essential for the maintenance of mitochondrial DNA (mtDNA), long life span, and mitochondrial morphology. Similarly, a uvs-5 mutant accumulates deletions within its mtDNA, has a shortened life span, and harbors fragmented mitochondria, the latter of which is indicative of an imbalance between mitochondrial fission and fusion. Since the uvs-5 mutation maps very close to the locus of fzo1, encoding a mitofusin homologue thought to mediate mitochondrial outer membrane fusion, we determined the sequence of the fzo1 gene in the uvs-5 mutant. A single amino acid substitution (Q368R) was found in the GTPase domain of the FZO1 protein. Expression of wild-type FZO1 in the uvs-5 strain rescued the mutant phenotypes, while expression of a mutant FZO1 protein did not. Moreover, when knock-in of the Q368R mutation was performed on a wild-type strain, the resulting mutant displayed phenotypes identical to those of the uvs-5 mutant. Therefore, we concluded that the previously unidentified uvs-5 gene is fzo1. Furthermore, we used immunoprecipitation analysis to show that the FZO1 protein interacts with MUS-10, which suggests that these two proteins may function together to maintain mitochondrial morphology.


Assuntos
Proteínas Fúngicas/genética , GTP Fosfo-Hidrolases/genética , Proteínas Mitocondriais/genética , Neurospora crassa/enzimologia , Sequência de Aminoácidos , Substituição de Aminoácidos , Mapeamento Cromossômico , Proteínas de Drosophila/genética , Proteínas Fúngicas/química , Proteínas Fúngicas/metabolismo , GTP Fosfo-Hidrolases/química , GTP Fosfo-Hidrolases/metabolismo , Ligação Genética , Longevidade , Proteínas de Membrana/genética , Viabilidade Microbiana , Proteínas Mitocondriais/química , Proteínas Mitocondriais/metabolismo , Anotação de Sequência Molecular , Dados de Sequência Molecular , Micélio/fisiologia , Neurospora crassa/genética , Neurospora crassa/fisiologia , Fenótipo , Análise de Sequência de DNA , Homologia de Sequência de Aminoácidos , Esporos Fúngicos/fisiologia
11.
Fungal Genet Biol ; 49(4): 263-70, 2012 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-22395065

RESUMO

Stalled replication forks easily collapse and such structures can induce DNA strand breaks or toxic recombination products. Therefore, factors involved in stabilization of replication should be important for genome integrity. In our previous study, loss of both ATM and ATR homologues was shown to cause growth defects and chromosome instability in Neurospora crassa. To elucidate the relationships between these defects and replication instability, we focused on one of the viable replication factors, mrc1. We identified an mrc1 homologue from the N. crassa genome database. The mrc1 disruptant was sensitive to the replication inhibitor hydroxyurea (HU) and delayed restart of the cell cycle from HU treatment. Importantly, HU treatment induced histone H2A phosphorylation in the mrc1 mutant but not in the wild type. Furthermore, the HU-induced H2A phosphorylation was completely dependent on the ATM homologue mus-21, and dysfunction of mus-21 increased HU sensitivity of the mrc1 mutant. These results indicate that Neurospora mrc1 is important for stabilization of replication forks and that loss of mrc1 causes activation of the DNA damage checkpoint. Unexpectedly, loss of mrc1 did not affect cell growth, but the deletion of mrc1 reduced hyphal growth speed and conidia viability in the mus-9 and mus-21 mutants. The mrc1 mus-9 and mrc1 mus-21 double mutants also showed accumulation of micronuclei, which is a typical marker of chromosome instability. These results imply that activation of the checkpoint pathway can protect cells from instability of DNA replication caused by loss of mrc1.


Assuntos
Instabilidade Cromossômica/genética , Replicação do DNA/genética , DNA Fúngico/genética , Proteínas Fúngicas/genética , Neurospora crassa/fisiologia , Ciclo Celular/efeitos dos fármacos , Ciclo Celular/genética , Instabilidade Cromossômica/efeitos dos fármacos , Dano ao DNA/efeitos dos fármacos , Dano ao DNA/genética , Reparo do DNA/efeitos dos fármacos , Reparo do DNA/genética , Replicação do DNA/efeitos dos fármacos , Proteínas Fúngicas/metabolismo , Histonas/efeitos dos fármacos , Histonas/genética , Histonas/metabolismo , Hidroxiureia/farmacologia , Hifas/genética , Hifas/crescimento & desenvolvimento , Micronúcleos com Defeito Cromossômico , Mutação , Neurospora crassa/citologia , Neurospora crassa/efeitos dos fármacos , Neurospora crassa/genética , Inibidores da Síntese de Ácido Nucleico/farmacologia , Fosforilação/efeitos dos fármacos , Esporos Fúngicos/citologia , Esporos Fúngicos/genética , Esporos Fúngicos/fisiologia
12.
Genetics ; 185(4): 1257-69, 2010 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-20516500

RESUMO

While mitochondria are renowned for their role in energy production, they also perform several other integral functions within the cell. Thus, it is not surprising that mitochondrial dysfunction can negatively impact cell viability. Although mitochondria have received an increasing amount of attention in recent years, there is still relatively little information about how proper maintenance of mitochondria and its genomes is achieved. The Neurospora crassa mus-10 mutant was first identified through its increased sensitivity to methyl methanesulfonate (MMS) and was thus believed to be defective in some aspect of DNA repair. Here, we report that mus-10 harbors fragmented mitochondria and that it accumulates deletions in its mitochondrial DNA (mtDNA), suggesting that the mus-10 gene product is involved in mitochondrial maintenance. Interestingly, mus-10 begins to senesce shortly after deletions are visualized in its mtDNA. To uncover the function of MUS-10, we used a gene rescue approach to clone the mus-10 gene and discovered that it encodes a novel F-box protein. We show that MUS-10 interacts with a core component of the Skp, Cullin, F-box containing (SCF) complex, SCON-3, and that its F-box domain is essential for its function in vivo. Thus, we provide evidence that MUS-10 is part of an E3 ubiquitin ligase complex involved in maintaining the integrity of mitochondria and may function to prevent cellular senescence.


Assuntos
DNA Mitocondrial/genética , Proteínas F-Box/metabolismo , Proteínas Fúngicas/metabolismo , Mitocôndrias/metabolismo , Neurospora crassa/metabolismo , Sequência de Bases , Western Blotting , Proteínas Culina/genética , Proteínas Culina/metabolismo , Citosol/metabolismo , Fragmentação do DNA , DNA Mitocondrial/química , Motivos F-Box/genética , Proteínas F-Box/genética , Proteínas Fúngicas/genética , Deleção de Genes , Hifas/genética , Hifas/crescimento & desenvolvimento , Hifas/metabolismo , Microscopia de Fluorescência , Mitocôndrias/genética , Dados de Sequência Molecular , Mutação , Neurospora crassa/genética , Neurospora crassa/crescimento & desenvolvimento , Ligação Proteica , Proteínas Quinases Associadas a Fase S/genética , Proteínas Quinases Associadas a Fase S/metabolismo , Análise de Sequência de DNA , Técnicas do Sistema de Duplo-Híbrido
13.
Fungal Genet Biol ; 47(10): 809-17, 2010 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-20553930

RESUMO

Genome integrity is maintained by many cellular mechanisms in eukaryotes. One such mechanism functions during the cell cycle and is known as the DNA damage checkpoint. In the filamentous fungus Neurospora crassa, mus-9 and mus-21 are homologes of two key factors of the mammalian DNA damage checkpoint, ATR and ATM, respectively. We previously showed that mus-9 and mus-21 mutants are sensitive to DNA damage and that each mutant shows a characteristic growth defect: conidia from the mus-9 mutant have reduced viability and the mus-21 mutant exhibits slow hyphal growth. However, the relationship between these two genes has not been determined because strains carrying both mus-9 and mus-21 mutations could not be obtained. To facilitate analysis of a strain deficient in both mus-9 and mus-21, we introduced a specific mutation to the kinase domain of MUS-9 to generate a temperature-sensitive mus-9 allele (mus-9(ts)) which shows increased mutagen sensitivity at 37 degrees C. Then we crossed this strain with a mus-21 mutant to obtain a mus-9(ts) mus-21 double mutant. Growth of the mus-9(ts) mus-21 double mutant did not progress at the restrictive temperature (37 degrees C). Even at the permissive temperature (25 degrees C), this strain exhibited a higher mutagen sensitivity than that of the mus-9 and mus-21 single mutants, as well as slow hyphal growth and low viability of conidia. These results indicate that the mus-9(ts) mutation causes hypomorphic phenotypes in the mus-21 mutant and that these two genes regulate different pathways. Interestingly, we observed accumulation of micronuclei in the conidia of this double mutant, and such micronuclei were likely to correlate with spontaneous DSBs. Our results suggest that both mus-9 and mus-21 pathways are involved in DNA damage response, normal growth and maintenance of chromosome integrity, and that at least one of the pathways must be functional for survival.


Assuntos
Proteínas de Ciclo Celular/fisiologia , Cromossomos Fúngicos/metabolismo , Proteínas de Ligação a DNA/fisiologia , Proteínas Fúngicas/fisiologia , Neurospora crassa/crescimento & desenvolvimento , Proteínas Serina-Treonina Quinases/fisiologia , Proteínas Supressoras de Tumor/fisiologia , Sequência de Aminoácidos , Proteínas Mutadas de Ataxia Telangiectasia , Proteínas de Ciclo Celular/química , Proteínas de Ciclo Celular/genética , Cromossomos Fúngicos/genética , Proteínas de Ligação a DNA/química , Proteínas de Ligação a DNA/genética , Proteínas Fúngicas/química , Proteínas Fúngicas/genética , Dados de Sequência Molecular , Mutação , Neurospora crassa/enzimologia , Neurospora crassa/genética , Proteínas Serina-Treonina Quinases/química , Proteínas Serina-Treonina Quinases/genética , Estrutura Terciária de Proteína/genética , Alinhamento de Sequência , Proteínas Supressoras de Tumor/química , Proteínas Supressoras de Tumor/genética
14.
Biochem Biophys Res Commun ; 396(2): 289-93, 2010 May 28.
Artigo em Inglês | MEDLINE | ID: mdl-20406622

RESUMO

Gene targeting induced by homologous integration of a foreign DNA segment into a chromosomal target sequence enables precise disruption or replacement of genes of interest and provides an effective means to analyze gene function, and also becomes an useful technique for breeding. But, integration of introduced DNA fragments is predominantly non-homologous in most species. However, we presented high-efficient homologous integration in disruptants of non-homologous end joining (NHEJ), that is, the Ku70-, Ku80- or Lig4-homologs deficient strain, in a model fungus Neurospora crassa. When the effect of NHEJ-defective plants for gene targeting was therefore examined in a model plant Arabidopsis (Arabidopsis thaliana), the efficiencies of gene targeting in the Atlig4/Atlig4 plant were 2/7 (28.6%) against calli obtained a selection-marker gene, 2/16 (12.5%) against selected calli, and about 2/540 (0.004%) against total cell particles at the starting point for transformation. The results of this paper show that the NHEJ-deficient system might cause a decrease in the efficiency of transformation but gives true targeted transformants with high efficiency in plant cell.


Assuntos
Proteína AGAMOUS de Arabidopsis/genética , Arabidopsis/genética , Marcação de Genes/métodos , Transformação Genética , Células Cultivadas , Análise de Sequência de DNA
15.
DNA Repair (Amst) ; 7(12): 1951-61, 2008 Dec 01.
Artigo em Inglês | MEDLINE | ID: mdl-18790091

RESUMO

DNA damage checkpoint is an important mechanism for organisms to maintain genome integrity. In Neurospora crassa, mus-9 and mus-21 are homologues of ATR and ATM, respectively, which are pivotal factors of DNA damage checkpoint in mammals. A N. crassa clock gene prd-4 has been identified as a CHK2 homologue, but its role in DNA damage response had not been elucidated. In this study, we identified another CHK2 homologue and one CHK1 homologue from the N. crassa genome database. As disruption of these genes affected mutagen tolerance, we named them mus-59 and mus-58, respectively. The mus-58 mutant was sensitive to hydroxyurea (HU), but the mus-59 and prd-4 mutants showed the same HU sensitivity as that of the wild-type strain. This indicates the possibility that MUS-58 is involved in replication checkpoint and stabilization of stalled forks like mammalian CHK1. Phosphorylation of MUS-58 and MUS-59 was observed in the wild-type strain in response to mutagen treatments. Genetic relationships between those three genes and mus-9 or mus-21 indicated that the mus-9 mutation was epistatic to mus-58, and mus-21 was epistatic to prd-4. These relationships correspond to two signal pathways, ATR-CHK1 and ATM-CHK2 that have been established in mammalian cells. However, both the mus-9 mus-59 and mus-21 mus-58 double mutants showed an intermediate level between the two parental strains for CPT sensitivity. Furthermore, these double mutants showed severe growth defects. Our findings suggest that the DNA damage checkpoint of N. crassa is controlled by unique mechanisms.


Assuntos
Proteínas de Ciclo Celular/metabolismo , Proteínas Fúngicas/metabolismo , Neurospora crassa/metabolismo , Proteínas Quinases/genética , Proteínas Serina-Treonina Quinases/genética , Transdução de Sinais , Western Blotting , Proteínas de Ciclo Celular/genética , Sobrevivência Celular/efeitos dos fármacos , Quinase 1 do Ponto de Checagem , Quinase do Ponto de Checagem 2 , Ensaio de Unidades Formadoras de Colônias , Dano ao DNA/efeitos dos fármacos , Enzimas Reparadoras do DNA/metabolismo , Replicação do DNA/efeitos dos fármacos , Proteínas Fúngicas/genética , Imunoprecipitação , Mutagênicos/farmacologia , Mutação/genética , Neurospora crassa/genética , Proteínas Quinases/metabolismo , Proteínas Serina-Treonina Quinases/metabolismo
16.
Genes Genet Syst ; 82(6): 447-54, 2007 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-18270435

RESUMO

The un-17 mutant was originally isolated as an irreparable temperature-sensitive (ts) mutant in Neurospora crassa. Early experiments showed that cells of this mutant immediately stopped growing and died when the temperature of the culture was shifted from a permissive temperature (25 degrees C) to non-permissive temperature (35 degrees C). This ts phenotype is suppressed by addition of cycloheximide or in some conditions of growth repression. Even at the permissive temperature, it shows a female sterile phenotype and is deficient in production of exocellular superoxide dismutase SOD4 (EC 1.15.1.1). By searching for a DNA fragment that complements the ts phenotype of the un-17 mutant from a N. crassa genome library, we found the un-17 gene. The cloned un-17 gene encodes a homolog of the Saccharomyces cerevisiae poly(A) polymerase (PAP). The un-17 mutant had a one-base substitution mutation in the gene. The cloned un-17 genes from the wild-type strain and the un-17 mutant were introduced into both the un-17 mutant and wild-type strain. The un-17 mutant introduced by un-17 DNA from the wild-type strain showed recovery of both the ts and female sterile phenotypes. Moreover, the purified product derived from the wild-type strain showed PAP activity in vitro. These findings indicate that the un-17 mutant carries a ts mutation in the gene encoding PAP.


Assuntos
Genes Fúngicos , Mutação , Neurospora crassa/genética , Polinucleotídeo Adenililtransferase/genética , Temperatura , Sequência de Aminoácidos , Sequência de Bases , Clonagem Molecular , DNA Fúngico/metabolismo , Proteínas Fúngicas/genética , Dados de Sequência Molecular , Neurospora crassa/enzimologia , Fenótipo , Polinucleotídeo Adenililtransferase/metabolismo
17.
Glia ; 40(3): 360-71, 2002 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-12420315

RESUMO

The mrf-1 gene has been isolated from microglia exposed to cultured cerebellar granule neurons undergoing apoptosis. We have shown that mrf-1 is upregulated in response to neuronal death and degeneration both in vitro and in vivo. However, the exact role of MRF-1 remains unknown. Here we show that MRF-1 is released from cultured rat microglia, and its release is greatly enhanced under inflammatory conditions. When microglia were treated with ATP, the amount of MRF-1 that was released increased 10-fold compared to the basal level of release. Enhanced MRF-1 release was induced within 10 min and peaked within 1 h; after approximately 4 h, the MRF-1 release had returned to normal. MRF-1 release was stimulated by 2-methyl-thio-ATP (five-fold) and a P2X(7) selective agonist, 2'- and 3'-O-(4-benzoylbenzoyl)-ATP (ten-fold). Moreover, the ATP-stimulated MRF-1 release was inhibited by a P2X(7) selective antagonist, oxidized ATP (oATP), and also under a Ca(2+)-free condition. These results indicate that the effects of ATP are dependent on Ca(2+) influx through P2X(7) receptors. MRF-1 release was enhanced by Ca(2+)-ionophore A23187 (sixfold), thapsigargin (threefold); however, it was not enhanced by glutamate or lipopolysaccharide. Moreover, a platelet-activating factor enhanced microglial MRF-1 release in a dose-dependent manner. We also showed that a conditioned medium from cerebellar granule neurons undergoing apoptosis markedly increased MRF-1 release from microglia; that effect was significantly inhibited by oATP. These results indicate that selective inflammatory stimulations, including ATP and PAF, enhance MRF-1 release from microglia through a Ca(2+)-dependent mechanism and suggest that MRF-1 may play a role in cell-cell interactions under inflammatory conditions.


Assuntos
Quimiotaxia/imunologia , Encefalite/metabolismo , Gliose/metabolismo , Mediadores da Inflamação/metabolismo , Microglia/metabolismo , Proteínas do Tecido Nervoso/metabolismo , Trifosfato de Adenosina/análogos & derivados , Trifosfato de Adenosina/metabolismo , Trifosfato de Adenosina/farmacologia , Animais , Animais Recém-Nascidos , Sinalização do Cálcio/efeitos dos fármacos , Sinalização do Cálcio/fisiologia , Proteínas de Ligação ao Cálcio , Comunicação Celular/efeitos dos fármacos , Comunicação Celular/fisiologia , Células Cultivadas , Quimiotaxia/efeitos dos fármacos , Meios de Cultivo Condicionados/farmacologia , Encefalite/imunologia , Inibidores Enzimáticos/farmacologia , Gliose/imunologia , Mediadores da Inflamação/imunologia , Ionóforos/farmacologia , Proteínas dos Microfilamentos , Microglia/efeitos dos fármacos , Proteínas do Tecido Nervoso/imunologia , Neurônios/metabolismo , Fator de Ativação de Plaquetas/metabolismo , Fator de Ativação de Plaquetas/farmacologia , Agonistas do Receptor Purinérgico P2 , Antagonistas do Receptor Purinérgico P2 , Ratos , Ratos Sprague-Dawley , Receptores Purinérgicos P2/metabolismo , Receptores Purinérgicos P2X7 , Regulação para Cima/efeitos dos fármacos , Regulação para Cima/fisiologia
18.
Brain Res ; 952(1): 86-97, 2002 Oct 11.
Artigo em Inglês | MEDLINE | ID: mdl-12363408

RESUMO

Microglia are known to express purinergic receptors for extracellular ATP of both P2Y and P2X subtypes. In the CNS, ATP is released from neurons and acts as a signal between neurons and glia. The mrf-1 gene encodes a 17-kDa protein with a single calcium-binding (EF-hand) motif and is expressed specifically in microglia. The gene was isolated from activated microglia in response to apoptosis of cerebellar granule neurons in culture and is upregulated in response to neuronal death and degeneration in vivo. We have found that ATP suppresses the synthesis of the inflammation-related protein MRF-1 in cultured rat microglia. When microglia were treated with ATP (1 mM) for 6 h, mrf-1 mRNA levels decreased to approximately 50% compared to those in the control. This effect was dependent on both the treatment period and the dose of ATP. After ATP (1 mM) treatment for 16 h, levels of mrf-1 mRNA decreased to 37.3% and MRF-1 levels decreased to 55.0% compared to those in the control. A decrease in MRF-1 or its mRNA was also induced by benzoylbenzoyl-ATP (0.1 mM), a P2X(7) receptor-selective agonist, and by the Ca(2+) ionophore A23187 (2 micro M), dependent on extracellular Ca(2+). Moreover, ATP modified neither the MRF-1 degradation rate nor total protein synthesis. These results indicate that ATP selectively suppresses MRF-1 synthesis at the transcription level via Ca(2+) influx through P2X(7) receptors.


Assuntos
Trifosfato de Adenosina/farmacologia , Cálcio/metabolismo , Microglia/metabolismo , Proteínas do Tecido Nervoso/genética , Receptores Purinérgicos P2/metabolismo , Animais , Calcimicina/farmacologia , Proteínas de Ligação ao Cálcio , Células Cultivadas , Regulação para Baixo/efeitos dos fármacos , Espaço Extracelular/metabolismo , Expressão Gênica/efeitos dos fármacos , Ionóforos/farmacologia , Proteínas dos Microfilamentos , Microglia/citologia , Microglia/efeitos dos fármacos , Proteínas do Tecido Nervoso/metabolismo , RNA Mensageiro/metabolismo , Ratos , Ratos Sprague-Dawley , Receptores Purinérgicos P2X7
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