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1.
Artigo em Inglês | MEDLINE | ID: mdl-36760802

RESUMO

Determining resource allocations (memory and time) for submitted jobs in High Performance Computing (HPC) systems is a challenging process even for computer scientists. HPC users are highly encouraged to overestimate resource allocation for their submitted jobs, so their jobs will not be killed due to insufficient resources. Overestimating resource allocations occurs because of the wide variety of HPC applications and environment configuration options, and the lack of knowledge of the complex structure of HPC systems. This causes a waste of HPC resources, a decreased utilization of HPC systems, and increased waiting and turnaround time for submitted jobs. In this paper, we introduce our first ever implemented fully-offline, fully-automated, stand-alone, and open-source Machine Learning (ML) tool to help users predict memory and time requirements for their submitted jobs on the cluster. Our tool involves implementing six ML discriminative models from the scikit-learn and Microsoft LightGBM applied on the historical data (sacct data) from Simple Linux Utility for Resource Management (Slurm). We have tested our tool using historical data (saact data) using HPC resources of Kansas State University (Beocat), which covers the years from January 2019 - March 2021, and contains around 17.6 million jobs. Our results show that our tool achieves high predictive accuracy R 2 (0.72 using LightGBM for predicting the memory and 0.74 using Random Forest for predicting the time), helps dramatically reduce computational average waiting-time and turnaround time for the submitted jobs, and increases utilization of the HPC resources. Hence, our tool decreases the power consumption of the HPC resources.

2.
Artigo em Inglês | MEDLINE | ID: mdl-35373221

RESUMO

In this paper, we present a novel methodology for predicting job resources (memory and time) for submitted jobs on HPC systems. Our methodology based on historical jobs data (saccount data) provided from the Slurm workload manager using supervised machine learning. This Machine Learning (ML) prediction model is effective and useful for both HPC administrators and HPC users. Moreover, our ML model increases the efficiency and utilization for HPC systems, thus reduce power consumption as well. Our model involves using Several supervised machine learning discriminative models from the scikit-learn machine learning library and LightGBM applied on historical data from Slurm. Our model helps HPC users to determine the required amount of resources for their submitted jobs and make it easier for them to use HPC resources efficiently. This work provides the second step towards implementing our general open source tool towards HPC service providers. For this work, our Machine learning model has been implemented and tested using two HPC providers, an XSEDE service provider (University of Colorado-Boulder (RMACC Summit) and Kansas State University (Beocat)). We used more than two hundred thousand jobs: one-hundred thousand jobs from SUMMIT and one-hundred thousand jobs from Beocat, to model and assess our ML model performance. In particular we measured the improvement of running time, turnaround time, average waiting time for the submitted jobs; and measured utilization of the HPC clusters. Our model achieved up to 86% accuracy in predicting the amount of time and the amount of memory for both SUMMIT and Beocat HPC resources. Our results show that our model helps dramatically reduce computational average waiting time (from 380 to 4 hours in RMACC Summit and from 662 hours to 28 hours in Beocat); reduced turnaround time (from 403 to 6 hours in RMACC Summit and from 673 hours to 35 hours in Beocat); and acheived up to 100% utilization for both HPC resources.

3.
PEARC19 (2019) ; 20192019 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-35308798

RESUMO

High-Performance Computing (HPC) systems are resources utilized for data capture, sharing, and analysis. The majority of our HPC users come from other disciplines than Computer Science. HPC users including computer scientists have difficulties and do not feel proficient enough to decide the required amount of resources for their submitted jobs on the cluster. Consequently, users are encouraged to over-estimate resources for their submitted jobs, so their jobs will not be killing due insufficient resources. This process will waste and devour HPC resources; hence, this will lead to inefficient cluster utilization. We created a supervised machine learning model and integrated it into the Slurm resource manager simulator to predict the amount of required memory resources (Memory) and the required amount of time to run the computation. Our model involves using different machine learning algorithms. Our goal is to integrate and test the proposed supervised machine learning model on Slurm. We used over 10000 tasks selected from our HPC log files to evaluate the performance and the accuracy of our integrated model. The purpose of our work is to increase the performance of the Slurm by predicting the amount of require jobs memory resources and the time required for each particular job in order to improve the utilization of the HPC system using our integrated supervised machine learning model. Our results indicate that for larger jobs our model helps dramatically reduce computational turnaround time (from five days to ten hours for large jobs), substantially increased utilization of the HPC system, and decreased the average waiting time for the submitted jobs.

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