[Amplification of the phage lambda DNA sequence by polymerase chain reaction using thermostable DNA polymerase]. / Amplifikatsiia posledovatel'nostei DNK faga lambda metodom polimeraznoi tsepnoi reaktsii s ispol'zovaniem termostabil'noi DNK-polimerazy.

The efficiency of phage DNA amplification by the method of polymerase chain reaction (PCR) with Tth DNA-polymerase was studied for optimization of PCR conditions. The effect on amplification efficiency of medium ionic strength and pH, the presence of univalent cations, detergents, gelatin, ATP, pyrophosphate, SH-reagents and ratio of concentrations of Mg and dNTPs, primers and template was studied. It has been found that a pH optimum for PCR with Tth DNA-polymerase varies from 8.5 to 9.0. An ionic strength optimum for PCR is about 0.08. The influence of univalent cations on the activity of Tth DNA-polymerase can be expressed as NH4+ greater than Na+ greater than K+. 0.01% Tween-20 significantly increases the efficiency of PCR and 0.01% gelatin inhibits it. Addition of ATP, pyrophosphate, SH-reagents to the reaction mixture did not increase the yield of PCR product. It has been also shown that for the given PCR-system an optimum Mg/dNTPs molar ratio is within the range of 1.5-2.0. An optimum concentration of each of the pair of primers for this PCR-system is about 0.3 microM. The possibility of PCR-amplification of 500-8500 b.p. DNA fragments has been demonstrated.

Kinetic properties of the octameric and dimeric forms of mitochondrial creatine kinase and physiological role of the enzyme.

It has been found that at pH 7.4 and 2 mg/ml protein, bovine heart mitochondrial creatine kinase (CKm) contains less than 10% of the dimer. The constant for the CKm octamer dissociation into dimers, Kd, in the presence of substrates forming an analog of the complex of the transient state was found to be equal to 4.9 10(-17) M3. Using this value, the experimental conditions were chosen so as to achieve a practically complete dissociation of the octamer into dimers. Evidence has been obtained suggesting that the octamer does not dissociate into dimers during the time course of the kinetic experiments; the corresponding kinetic parameters of the CKm octamer and dimer are as follows: KMgATPm = 82 microM and 42 microM; KCrm = 8.1 mM and 3.4 mM; Vf = 61 and 60 micrograms-equiv. H+ min-1 mg-1; KMgADPm = 43 microM and 17 microM, KCPm = 0.68 mM and 0.23 mM; Vr = 162 and 111 micrograms-equiv. H+ min-1 mg-1. The experimental and calculated data shed additional light on the physiological role of CKm.

Study on heart mitochondrial creatine kinase using a cross-linking bifunctional reagent. II. The binding sites for the creatine kinase octamer on mitochondrial membranes have different properties.

Beef heart mitochondria suspended in 0.25 M sucrose were treated with 0.3% glutaraldehyde (GA). The membranes were disintegrated by ultrasonication in 0.25 M KCl and precipitated by centrifugation. The relative amount of the membrane-bound mitochondrial creatine kinase (CKm) does not depend on the time course of membrane disruption. The enzyme is not removed by repeated washing of the pellet. It is concluded that this part of CKm is cross-linked to mitochondrial membranes. The maximum amount of the enzyme capable of cross-linking to the membrane with an increase in GA concentration or incubation time makes up to about 50% of the total CKm activity present in the mitochondria. It is concluded also that the CKm binding sites differ with respect to their environment.

The quaternary structure of bovine heart mitochondrial creatine kinase.

Crosslinking of subunits of the high molecular weight oligomer of bovine heart mitochondrial creatine kinase (CKm) by dimethyl suberimidate and subsequent electrophoresis in the presence of sodium dodecyl sulfate gives eight protein bands. An increase in the time course of the enzyme crosslinking reaction results in the protein accumulation in the high molecular weight bands. Evidence has been obtained suggesting that crosslinking involves only the intraoligomeric contact areas. It is concluded that bovine heart CKm is an octamer. Crosslinking of intersubunit contacts in the octameric form of the enzyme by various diimidates has been carried out. The data obtained suggest that within the octamer the CKm subunits have a quasispherical rather than planar arrangement. This finding is supported by electron microscopy data.

Study on heart mitochondrial creatine kinase using a cross-linking bifunctional reagent. I. The binding involves the octameric form of the enzyme.

Bovine heart mitochondria suspended in 0.25 M sucrose were treated with 0.3% glutaraldehyde (GA). The membranes were disintegrated by ultrasonication in 0.25 M KCl and precipitated by centrifugation. The supernatant was assayed for creatine kinase (CKm) oligomeric forms by ultracentrifugation in a sucrose density gradient. A kinetic analysis of membrane-bound CKm was performed before and after ultrasonication. The data obtained suggest that the CKm octamer is the only form of CKm bound to mitochondrial membranes during GA treatment. This finding was confirmed by an analysis of extracts from untreated mitochondria using high resolution gel filtration.

[Determination of isoelectric points of oligomeric forms of mitochondrial creatine kinase]. / Opredelenie izoélektricheskikh tochek oligomernykh form mitokhondrial'noi kreatinkinazy.

Using isoelectrofocusing in three pH gradients differing in the initial pH value of the ampholyte gel mixture and in gradient pH range, the isoelectric points for the dimeric and octameric forms of mitochondrial creatine kinase from bovine heart and pigeon breast muscle were determined. The isoelectric points for the dimer and octamer are equal to 9.67 +/- 0.01 and 8.93 +/- 0.05 for the heart enzyme and to 9.56 +/- 0.08 and 8.91 +/- 0.23 for the skeletal muscle enzyme. The correctness of identification of the oligomeric forms of mitochondrial creatine kinase was confirmed by ultracentrifugation in a sucrose density linear gradient. Since creatine kinase is known to bind to mitochondrial membrane cardiolipin by electrostatic forces, it can be assumed that both oligomeric forms of the enzymes can bind to the membranes. However, the properties of the creatine kinase dimer suggest its greater ability to bind to mitochondrial membranes.