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1.
Br J Pharmacol ; 172(1): 201-13, 2015 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-25219905

RESUMO

BACKGROUND AND PURPOSE: Erythropoietin (EPO) is used to treat anaemia associated with chronic kidney disease (CKD). Hypoxia is associated with anaemia and is known to cause a decrease in cytochrome P450 (P450) expression. As EPO production is regulated by hypoxia, we investigated the role of EPO on P450 expression and function. EXPERIMENTAL APPROACH: Male Wistar rats were subjected to a 0.7% adenine diet for 4 weeks to induce CKD. The diet continued for an additional 2 weeks while rats received EPO by i.p. injection every other day. Following euthanasia, hepatic P450 mRNA and protein expression were determined. Hepatic enzyme activity of selected P450s was determined and chromatin immunoprecipitation was used to characterize binding of nuclear receptors involved in the transcriptional regulation of CYP2C and CYP3A. KEY RESULTS: EPO administration decreased hepatic mRNA and protein expression of CYP3A2 (P < 0.05), but not CYP2C11. Similarly, EPO administration decreased CYP3A2 protein expression by 81% (P < 0.001). A 32% decrease (P < 0.05) in hepatic CYP3A enzymatic activity (Vmax ) was observed for the formation of 6ßOH-testosterone in the EPO-treated group. Decreases in RNA pol II recruitment (P < 0.01), hepatocyte nuclear factor 4α binding (P < 0.05) and pregnane X receptor binding (P < 0.01) to the promoter region of CYP3A were also observed in EPO-treated rats. CONCLUSIONS AND IMPLICATIONS: Our data show that EPO decreases the expression and function of CYP3A, but not CYP2C in rat liver.


Assuntos
Sistema Enzimático do Citocromo P-450/metabolismo , Eritropoetina/farmacologia , Fígado/efeitos dos fármacos , Insuficiência Renal Crônica/metabolismo , Adenina , Animais , Receptor Constitutivo de Androstano , Sistema Enzimático do Citocromo P-450/genética , Dieta , Modelos Animais de Doenças , Fator 4 Nuclear de Hepatócito/genética , Fator 4 Nuclear de Hepatócito/metabolismo , Rim/patologia , Fígado/metabolismo , Masculino , Microssomos Hepáticos/efeitos dos fármacos , Microssomos Hepáticos/enzimologia , Receptor de Pregnano X , RNA Polimerase II/genética , RNA Polimerase II/metabolismo , RNA Mensageiro/metabolismo , Ratos Wistar , Receptores Citoplasmáticos e Nucleares/metabolismo , Receptores de Esteroides/genética , Receptores de Esteroides/metabolismo , Proteínas Recombinantes/farmacologia , Insuficiência Renal Crônica/patologia
2.
Nephron Clin Pract ; 124(1-2): 113-8, 2013.
Artigo em Inglês | MEDLINE | ID: mdl-24192796

RESUMO

BACKGROUND: Nephrologists need effective screening tools to identify hemodialysis patients at elevated risk for sudden cardiac death, the leading cause of death in this population. QTc intervals longer than 450 ms in males and 470 ms in females, measured by the gold standard tangent method (trueQTc), are prolonged and increase sudden cardiac death in healthy populations and patients with long QT syndrome. METHODS: We performed a retrospective ECG and chart review of hemodialysis patients. Our first objective was to determine if machine-measured QTc intervals (macQTc) could be used to identify dialysis patients with prolonged trueQTc. Our second objective was to determine at what macQTc could prolonged trueQTc be confidently diagnosed. RESULTS: macQTc differed from the trueQTc by an average of 16.54 ms, and by at least 20 ms in 46.8, 36.1, 53.6, 50.0 and 57.1% of all, short-hours daily hemodialysis, intermittent conventional hemodialysis, frequent nocturnal hemodialysis and intermittent nocturnal hemodialysis patients, respectively. The positive predictive value, negative predictive value, sensitivity and specificity of prolonged macQTc predicting prolonged trueQTc was 57.6, 92.6, 79.1 and 81.8%, respectively. Thus, macQTc is inaccurate at predicting the gold standard trueQTc in hemodialysis patients. macQTc greater than 480 ms in hemodialysis patients predicts trueQTc prolongation with a positive predictive value of 95.2%, but with a low sensitivity of 32.3%. CONCLUSION: In hemodialysis patients, ECG macQTc intervals are insufficiently sensitive or specific to predict prolonged trueQTc intervals, unless >480 ms.


Assuntos
Erros de Diagnóstico , Eletrocardiografia/métodos , Síndrome do QT Longo/diagnóstico , Síndrome do QT Longo/etiologia , Diálise Renal , Insuficiência Renal Crônica/complicações , Insuficiência Renal Crônica/terapia , Idoso , Feminino , Humanos , Masculino , Pessoa de Meia-Idade , Insuficiência Renal Crônica/diagnóstico , Reprodutibilidade dos Testes , Estudos Retrospectivos , Sensibilidade e Especificidade
3.
Aliment Pharmacol Ther ; 37(3): 340-5, 2013 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-23190184

RESUMO

BACKGROUND: Methotrexate (MTX) is administered subcutaneously to Crohn's Disease (CD) patients. There are very few studies evaluating the use of oral (PO) MTX in CD. A drug and its pharmaceutical alternative are equivalent (bioequivalence) when the bioavailability of the alternative falls within 80-125% of the bioavailability of the standard (US Food and Drug Administration - FDA). AIM: To compare the pharmacokinetic (PK) profiles of PO and subcutaneous (SC) MTX in CD patients to determine the bioequivalence of these two routes. METHODS: Eleven patients received a PO and an SC MTX dose (25 mg) separated by one week over a two-week interval. Blood samples were collected at specified times over a 24-h period for each patient on two separate days. MTX plasma levels were obtained using sensitive mass spectrometry. Areas under the curve (AUC) were compared between the two routes. RESULTS: The mean AUC values were 3375 ng/mL × h (PO MTX) and 3985 ng/mL × h (SC MTX). The mean AUC ratio (PO/SC) was 0.86 (0.62-1.08). This correlates with a relative PO bioavailability of 86% in comparison to SC. The 90% confidence interval for the mean AUC (PO/SC) ratio is (0.785, 0.929). There were no adverse events. CONCLUSIONS: The mean MTX AUC (PO/SC) in these patients falls outside the 90% confidence interval for the bioequivalence limit. SC MTX is more bioavailable than PO MTX; however, the mean relative MTX bioavailability (PO/SC) nearly met the FDA bioequivalence standard and PO MTX could be proposed in responders who would prefer this route.


Assuntos
Doença de Crohn/metabolismo , Imunossupressores/farmacocinética , Metotrexato/farmacocinética , Administração Cutânea , Administração Oral , Adulto , Área Sob a Curva , Doença de Crohn/tratamento farmacológico , Feminino , Humanos , Imunossupressores/administração & dosagem , Masculino , Metotrexato/administração & dosagem , Pessoa de Meia-Idade , Ontário , Equivalência Terapêutica
4.
J Clin Pharmacol ; 52(4): 530-42, 2012 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-21505084

RESUMO

Mesna and its dimer, dimesna, are coadministered for mitigation of ifosfamide- and cisplatin-induced toxicities, respectively. Dimesna is selectively reduced to mesna in the kidney, producing its protective effects. In vitro screens of uptake and efflux transporters revealed saturable uptake by renal organic anion transporters OAT1, OAT3, and OAT4. Efflux transporters breast cancer resistance protein; multidrug and toxin extrusion 1 (MATE1); multidrug resistance proteins MRP1, MRP2, MRP4, and MRP5; and P-glycoprotein (Pgp) significantly reduced dimesna accumulation. Further investigation demonstrated that renal apical efflux transporters MATE1, MRP2, and Pgp were also capable of mesna efflux. Administration of OAT inhibitor probenecid to healthy subjects significantly increased combined mesna and dimesna plasma exposure (91% ± 34%) while decreasing the renal clearance due to net secretion (67.0% ± 12.7%) and steady-state volume of distribution (45.2% ± 13.4%). Thus, the kidney represents a significant sink of total mesna, whereas function of renal drug transporters facilitates clearance in excess of glomerular filtration rate and likely the presence of active mesna in the urine. Loss of renal transporter function due to genetic variability or drug-drug interactions may decrease the efficacy of chemoprotectants, increasing the risk of ifosfamide- and cisplatin-induced toxicities.


Assuntos
Rim/metabolismo , Proteínas de Membrana Transportadoras/metabolismo , Mesna/farmacocinética , Substâncias Protetoras/farmacocinética , Adulto , Feminino , Taxa de Filtração Glomerular , Células HeLa , Humanos , Masculino , Mesna/análogos & derivados , Pessoa de Meia-Idade , Transportadores de Ânions Orgânicos/metabolismo , Probenecid/farmacologia , Distribuição Tecidual , Adulto Jovem
5.
J Clin Pharmacol ; 52(11): 1689-97, 2012 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-22167570

RESUMO

Response to statin therapy is often unpredictable because of variability in metabolism and transport. In the recently created organic anion transporting-polypeptide 1b2 (Oatp1b2/Slco1b2)-null mice, the investigators found significantly lower liver-to-plasma ratios compared with controls for atorvastatin (16.0 ± 5.1 vs 43.5 ± 13.7, P = .002) and rosuvastatin (15.2 ± 3.3 vs 28.4 ± 9.3, P = .03), but not simvastatin (5.2 ± 1.1 vs 6.3 ± 2.9, P = .49), following tail vein injection of 1 mg/kg of each drug. In addition, the investigators examined intraindividual variation in atorvastatin, rosuvastatin, and simvastatin pharmacokinetics in healthy human subjects in a crossover study design. Areas under the plasma concentration-time curve of atorvastatin and simvastatin acid were significantly related (Spearman r = 0.68; P = .035), whereas rosuvastatin profile was not related to atorvastatin or simvastatin exposure. Together, these results in mice and humans demonstrate that predictability of exposure to one statin based on another is dependent on the specific statin pairs and the context in which they are compared.


Assuntos
Fluorbenzenos/farmacocinética , Ácidos Heptanoicos/farmacocinética , Inibidores de Hidroximetilglutaril-CoA Redutases/farmacocinética , Transportadores de Ânions Orgânicos Sódio-Independentes/metabolismo , Pirimidinas/farmacocinética , Pirróis/farmacocinética , Sinvastatina/farmacocinética , Sulfonamidas/farmacocinética , Adulto , Animais , Área Sob a Curva , Atorvastatina , Estudos Cross-Over , Feminino , Fluorbenzenos/sangue , Ácidos Heptanoicos/sangue , Humanos , Inibidores de Hidroximetilglutaril-CoA Redutases/sangue , Fígado/metabolismo , Transportador 1 de Ânion Orgânico Específico do Fígado , Masculino , Camundongos , Camundongos Knockout , Pessoa de Meia-Idade , Transportadores de Ânions Orgânicos Sódio-Independentes/genética , Pirimidinas/sangue , Pirróis/sangue , Rosuvastatina Cálcica , Sinvastatina/sangue , Sulfonamidas/sangue , Adulto Jovem
8.
JAAPA ; Suppl Initiating Insulin: 3-8, 2007 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-18050526

RESUMO

Despite the armamentarium of oral and injectable agents available for the treatment of type 2 diabetes, there is clearly a significant gap between current recommendations for glycemic targets and the proportion of patients who can achieve and maintain glycemic control. Early diagnosis and intervention, particularly with the initiation of insulin therapy, may delay the progressive loss of pancreatic beta cells and the risk for macrovascular and microvascular complications. While there are numerous myths and misconceptions surrounding insulin therapy, physician and patient education, as well as an awareness of cultural sensitivities, can be instrumental in overcoming these barriers.


Assuntos
Diabetes Mellitus Tipo 2/tratamento farmacológico , Insulina/uso terapêutico , Relações Médico-Paciente , Administração Oral , Atitude Frente a Saúde , Glicemia/metabolismo , Diabetes Mellitus Tipo 2/fisiopatologia , Diabetes Mellitus Tipo 2/psicologia , Progressão da Doença , Humanos , Hiperglicemia/prevenção & controle , Hipoglicemiantes/administração & dosagem , Hipoglicemiantes/uso terapêutico , Injeções Subcutâneas/psicologia , Insulina/sangue , Falha de Tratamento
9.
Cytogenet Genome Res ; 102(1-4): 32-8, 2003.
Artigo em Inglês | MEDLINE | ID: mdl-14970675

RESUMO

We have constructed a medium density physical map of bovine chromosome 19 using a combination of mapping loci on both a bovine bacterial artificial chromosome (BAC) scaffold map and a whole genome radiation hybrid (WGRH) panel. The resulting map contains 70 loci spanning the length of bovine chromosome 19. Three contiguous groups of BACs were identified on the basis of multiple loci mapping to individual BAC clones. Bovine chromosome 19 was found in this study to be comprised almost entirely from regions of human chromosome 17, with a small region putatively assigned to human chromosome 10. Fourteen breakpoints between the bovine and human chromosomes were detected, with a possibility of five more based on ordering of the WGRH map.


Assuntos
Cromossomos Artificiais Bacterianos/genética , Cromossomos/genética , Genoma , Mapeamento Físico do Cromossomo/métodos , Mapeamento Físico do Cromossomo/veterinária , Mapeamento de Híbridos Radioativos/métodos , Mapeamento de Híbridos Radioativos/veterinária , Animais , Bovinos , Mapeamento de Sequências Contíguas/métodos , Mapeamento de Sequências Contíguas/veterinária , Marcadores Genéticos/genética , Humanos , Masculino , Sondas de Oligonucleotídeos/genética
10.
Spine (Phila Pa 1976) ; 26(10): 1152-6, 2001 May 15.
Artigo em Inglês | MEDLINE | ID: mdl-11413430

RESUMO

STUDY DESIGN: Controlled study to assess the efficacy of aprotinin and Amicar in reducing blood loss during complex spinal fusions. OBJECTIVES: To compare blood loss and the clotting profile with a thromboelastogram in patients with spinal deformities undergoing sequential anterior and posterior spinal fusions treated intraoperatively with either aprotinin or Amicar. SUMMARY OF BACKGROUND DATA: Spinal fusion for correction of adult spinal deformities is associated with large blood losses despite the implementation of multiple factors to reduce this blood loss. The antifibrinolytics aprotinin and Amicar have both been shown to reduce blood loss in other surgical procedures with the potential for large blood loss. Hence, we compared their efficacy for reducing blood loss in complex spinal fusions. METHODS: Sixty patients for elective sequential anteroposterior thoracolumbosacral fusions were randomly assigned to three groups: control, aprotinin, and Amicar. Patients were assessed for blood loss, transfusion requirements, postoperative complications, and coagulation profile using a thromboelastogram. RESULTS: The study demonstrated a significant reduction in total blood loss (aprotinin 3628 mL, Amicar 4056 mL, control 5181 mL) and transfusion requirements using the half-dose aprotinin regimen compared with Amicar or control. Aprotinin also preserved the thromboelastogram mean clot formation time, clot strength, and clotting index compared with Amicar or control. CONCLUSIONS: For complex spinal operations with large blood losses, the half-dose aprotinin regimen will reduce blood loss and the need for blood components and may have a role in reducing postoperative lung injury.


Assuntos
Ácido Aminocaproico/uso terapêutico , Antifibrinolíticos/uso terapêutico , Aprotinina/uso terapêutico , Perda Sanguínea Cirúrgica/prevenção & controle , Fusão Vertebral , Coluna Vertebral/cirurgia , Antifibrinolíticos/administração & dosagem , Aprotinina/administração & dosagem , Coagulação Sanguínea , Transfusão de Sangue , Relação Dose-Resposta a Droga , Humanos , Pessoa de Meia-Idade , Tromboelastografia
12.
Spine (Phila Pa 1976) ; 26(4): 387-90, 2001 Feb 15.
Artigo em Inglês | MEDLINE | ID: mdl-11224886

RESUMO

STUDY DESIGN: Observational analyses of 55 adult patients who underwent elective sequential anterior-posterior thoracolumbosacral surgical corrections for spinal deformities were used to evaluate the efficacy of pulmonary artery catheter monitoring. OBJECTIVE: To demonstrate that during complex reconstructive surgery for spinal deformities, pulmonary artery catheter monitoring identifies a subset of patients with pulmonary injury and is essential in their management. SUMMARY OF BACKGROUND DATA: Patients who undergo sequential anterior-posterior thoracolumbosacral surgical corrections for spinal deformities experience significant perioperative morbidity. Although the value of pulmonary artery catheter monitoring is controversial, its use in these procedures may help identify potential physiologic complications and improve surgical outcome. METHODS: All patients were monitored with a pulmonary artery catheter during surgery until at least postoperative day 1. Outcome measurements included blood loss, vertebral levels fused, operative time, postoperative respiratory complications, and days in intensive care. RESULTS: Eight (8/55; 14.5%) patients according to pulmonary artery catheter monitoring demonstrated elevated pulmonary vascular resistance and noncardiac pulmonary edema. These patients had longer operative procedures with greater blood loss and had more postoperative respiratory complications. They were treated appropriately in intensive care and discharged without further complications. CONCLUSION: Pulmonary artery catheter monitoring of patients who undergo complex spinal fusion facilitates the identification of patients with pulmonary injury and is essential in the management of these patients in the postoperative period. It may, also, be a marker for embolic injury to the lung.


Assuntos
Cateterismo de Swan-Ganz/estatística & dados numéricos , Complicações Intraoperatórias/diagnóstico , Procedimentos de Cirurgia Plástica/efeitos adversos , Pressão Propulsora Pulmonar/fisiologia , Síndrome do Desconforto Respiratório/diagnóstico , Curvaturas da Coluna Vertebral/cirurgia , Fusão Vertebral/efeitos adversos , Adulto , Cateterismo de Swan-Ganz/métodos , Cateterismo de Swan-Ganz/tendências , Humanos , Complicações Intraoperatórias/etiologia , Complicações Intraoperatórias/prevenção & controle , Pessoa de Meia-Idade , Complicações Pós-Operatórias/etiologia , Complicações Pós-Operatórias/terapia , Artéria Pulmonar/fisiologia , Edema Pulmonar/diagnóstico , Edema Pulmonar/etiologia , Edema Pulmonar/fisiopatologia , Procedimentos de Cirurgia Plástica/métodos , Análise de Regressão , Síndrome do Desconforto Respiratório/etiologia , Síndrome do Desconforto Respiratório/prevenção & controle , Fusão Vertebral/métodos , Resultado do Tratamento
13.
J Clin Anesth ; 13(8): 556-60, 2001 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-11755323

RESUMO

STUDY OBJECTIVE: To assess the utility of troponin I, the only molecular marker of myocardial injury not expressed in regenerating muscle, in diagnosing perioperative myocardial infarction (MI) in the setting of orthopedic surgery where false elevations in creatine kinase MB isoenzymes (CKMB) are known to occur. DESIGN: Prospective study. SETTING: University-affiliated hospital. PATIENTS: 85 patients with risk factors for coronary artery disease (CAD) who were scheduled for orthopedic surgery, including total knee arthroplasty, 34; total hip arthroplasty, 36; posterior spine fusion, 7; and other orthopedic operations, 8. INTERVENTIONS: Patients were observed in the postanesthesia care unit for at least 24 hours where they had an electrocardiogram (ECG) performed, and blood drawn to rule out MI. MEASUREMENTS: Blood samples for measurement of creatine kinase MB isoenzymes (CKMB) and troponin I were drawn at 8-hour intervals for up to 24 hours. MAIN RESULTS: Five (5/85) patients had elevated levels of both CKMB and troponin I postoperatively. New ECG abnormalities were present in all but one patient who had an old anterolateral MI. Troponin I peaked within 16 hours except in one patient where it continued to increase. That female patient developed cardiogenic pulmonary edema. All the others did well clinically. Six patients (6/85) had a positive CKMB index, and a negative troponin I level. None had ECG changes, except for one in whom subsequent cardiac catheterization showed insignificant CAD. They all did well clinically. All patients with an elevated troponin I level had a positive CKMB index. CONCLUSIONS: Troponin I is as sensitive a marker of MI as CKMB in the orthopedic population, but it has a higher specificity in the perioperative setting. Troponin I can be helpful in properly identifying the source of CKMB elevation postoperatively when this elevation is questionable.


Assuntos
Infarto do Miocárdio/diagnóstico , Procedimentos Ortopédicos , Complicações Pós-Operatórias/diagnóstico , Troponina I/sangue , Idoso , Biomarcadores/sangue , Creatina Quinase/sangue , Creatina Quinase Forma MB , Eletrocardiografia , Feminino , Humanos , Isoenzimas/sangue , Masculino , Estudos Prospectivos , Fatores de Risco , Sensibilidade e Especificidade
14.
Anesth Analg ; 90(6): 1257-61, 2000 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-10825304

RESUMO

UNLABELLED: Perioperative myocardial ischemia (MI) is associated with postoperative cardiac morbidity. Postoperative sympatholysis may reduce the incidence of MI. This study evaluated such a reduction postoperatively with the administration of prophylactic beta-blockers in patients undergoing elective total knee arthroplasty with epidural anesthesia and postoperative epidural analgesia. One hundred seven patients were preoperatively randomized into two groups, control and beta-blockers, who received postoperative esmolol infusions on the day of surgery and metoprolol for the next 48 h to maintain a heart rate less than 80 bpm. Patients were followed for ST segment depression by using a Holter monitor and adverse cardiac outcomes. Postoperative electrocardiographic ischemia was significantly more prevalent in the control group compared with the beta-blocker group during esmolol blockade (0 of 52 vs 4 of 55; P = 0.04) and tended to be more common in the control group the next two days (8 of 55 vs 3 of 52; P = 0.135). In addition, the number of ischemic events (control, 50; beta-blockers, 16) and total ischemic time (control, 709 min; beta-blocker, 236 min) were also significantly different from the control group. Myocardial infarctions and cardiac events were more common in the control group, but these differences were not significant. Our results suggest that the use of prophylactic beta-blocker therapy may reduce the incidence of postoperative MI. IMPLICATIONS: Prophylactic beta adrenergic blockade administered after elective total knee arthroplasty was associated with a reduced prevalence and duration of postoperative myocardial ischemia detected with Holter monitoring.


Assuntos
Antagonistas Adrenérgicos beta/uso terapêutico , Isquemia Miocárdica/prevenção & controle , Complicações Pós-Operatórias/prevenção & controle , Antagonistas Adrenérgicos beta/administração & dosagem , Idoso , Idoso de 80 Anos ou mais , Analgesia Controlada pelo Paciente , Artroplastia do Joelho , Eletrocardiografia , Eletrocardiografia Ambulatorial , Feminino , Humanos , Masculino , Pessoa de Meia-Idade , Isquemia Miocárdica/epidemiologia , Isquemia Miocárdica/etiologia , Período Pós-Operatório , Risco
15.
Electrophoresis ; 20(11): 2196-203, 1999 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-10493124

RESUMO

The identity of 45 protein spots representing 32 orthologues within the Ochrobactrum anthropi proteome within a gradient of pH 4-7, and mass range 5-90 kDa were determined across species boundaries. These proteins could be classified into 13 functional categories and establish metabolic, regulatory and translatory systems including amino acid biosynthesis, electron transport and the potential for plant symbiosis in a molecularly understudied organism. Amino acid composition and/or peptide mass fingerprinting were employed as a means to search the Swiss-Prot and OWL protein sequence databases for similarity within a broad taxonomic class of bacteria. Candidate matches from database searches could be compared and a simple multiplication matrix based on co-occurrence and rank within the top 96 most similar entries was used to provide statistical confidence. This mathematical matrix was evaluated with respect to the characterisation of O. anthropi, an unsequenced and understudied bacterium, in the light of the recent influx of DNA sequence information.


Assuntos
Proteínas de Bactérias/análise , Ochrobactrum anthropi/química , Acetil-CoA C-Acetiltransferase , Aminoácidos/biossíntese , Proteínas de Bactérias/genética , Metabolismo Energético , Ochrobactrum anthropi/genética , Ochrobactrum anthropi/metabolismo , Simbiose
16.
Biochem Biophys Res Commun ; 253(1): 70-9, 1998 Dec 09.
Artigo em Inglês | MEDLINE | ID: mdl-9875222

RESUMO

Proteome studies complement current molecular approaches through analysis of the actively translated portion of the genome (the "functional proteome"). Two-dimensional gel electrophoresis (2-DGE) utilising immobilized pH gradients of pH 2.3-5.0 and pH 6.0-11.0, developed with predetermined regions of overlap compatible with commercially available pH 4.0-7.0 gradients, permitted the display of a significant portion of the proteome of Mycobacterium tuberculosis H37Rv. A significant portion of the M. tuberculosis proteome, in the molecular mass (M(r)) window 5 kDa to 200 kDa and with isoelectric point (pI) between pH 2.3 and 11.0, was visualised for the first time. A total of 493 protein spots were effectively resolved, including 126 spots that could not be seen using standard pH 4.0-7.0 gradients. These results were used to compare the physical properties of the observed proteins to the theoretical predictions of the recently completed M. tuberculosis H37Rv genome. Most proteins were found in the pI and mass window of pH 4.0-7.0 and 10-100 kDa. Analysis of the predicted proteome revealed a bimodal pI distribution, with substantial numbers of proteins in the pI regions 4.0-7.0 and 9.0-12.0 as has been seen for the majority of completed genomes. Such data may reveal current limitations in experimental extraction and separation of extremely basic, high M(r) and hydrophobic proteins via 2-DGE. Conversely, 13 acidic proteins were observed with pI less than the lowest value predicted by the genome. In addition, a subset of small protein (< 10 kDa) were observed within the pI region of pH 5.0-8.0 that were not predicted by the complete genomic sequence, reflecting the current inability to distinguish small genes from within DNA sequence. This work represents the foundation for comparing the protein expression patterns of different pathogenic and nonpathogenic M. tuberculosis strains. The characterization of M. tuberculosis protein expression, further facilitated by the recent completion of the genome sequence, could aid in developing more effective diagnostic or therapeutic reagents.


Assuntos
Proteínas de Bactérias/química , Proteínas de Bactérias/genética , Genoma Bacteriano , Mycobacterium tuberculosis/química , Mycobacterium tuberculosis/genética , Proteínas de Bactérias/biossíntese , Biologia Computacional/métodos , Eletroforese em Gel Bidimensional , Regulação Bacteriana da Expressão Gênica , Concentração de Íons de Hidrogênio , Peso Molecular
17.
Electrophoresis ; 18(8): 1384-92, 1997 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-9298652

RESUMO

Tuberculosis remains a major health problem throughout the world and the failure of the existing bacille Calmette-Guérin (BCG) vaccine in recent trials has prompted a search for potential replacements. Recent advances in molecular and cell biology have cast doubts on the ability of genetic analysis alone to predict polygenic human diseases and other complex phenotypes and have therefore redirected our attention to proteome studies to complement information obtained from DNA sequencing initiatives. Novel acidic (pH 2.3-5) and basic (pH 6-11) IPG gel gradients were employed in conjunction with commercially available pH 4-7 gradients to significantly increase (fourfold) the number of protein spots previously resolved on two-dimensional (2-D) gels of Mycobacterium species. A total of 772 and 638 protein spots were observed for M. bovis BCG and M. tuberculosis H37Rv, respectively, the latter corresponding to only the pH regions 4-7 and 6-11. Of interest was the bimodal distribution observed for proteins separated from M. bovis BCG across both M(r) and pH ranges. Some differences in protein expression were observed between these two organisms, contrary to what may have been expected considering the high degree of conservation in gene order and sequence similarity between homologous genes. Further work will be directed towards a more detailed analysis of these differences, so as to allow more accurate diagnosis between vaccination and active tuberculosis. The latter is of major importance to epidemiological studies and for patient management.


Assuntos
Proteínas de Bactérias/genética , Proteínas de Bactérias/isolamento & purificação , Eletroforese em Gel Bidimensional/métodos , Genoma Bacteriano , Mycobacterium bovis/química , Mycobacterium bovis/genética , Mycobacterium tuberculosis/química , Mycobacterium tuberculosis/genética , Mapeamento de Peptídeos/métodos , Eletroforese em Gel Bidimensional/estatística & dados numéricos , Humanos , Concentração de Íons de Hidrogênio , Mapeamento de Peptídeos/estatística & dados numéricos , Reprodutibilidade dos Testes , Especificidade da Espécie
18.
Vet Rec ; 140(17): 446-9, 1997 Apr 26.
Artigo em Inglês | MEDLINE | ID: mdl-9153744

RESUMO

Over the past 30 years cattle have been identified by blood typing, but recently the use of DNA markers has provided a more precise method of identifying individuals and verifying their parentage. This article describes the use of microsatellite-based DNA markers for confirming the identity of semen, as part of the evidence presented in a legal dispute. Two panels of markers and two methods for identifying allelic variation are compared; for both approaches the likelihood of finding two Charolais individuals with the same genotype was less than one in a million. Animals can therefore be identified conclusively from DNA samples, a technique which could be of use when their identity is in dispute.


Assuntos
Marcadores Genéticos , Sêmen , Alelos , Sistemas de Identificação Animal , Animais , Autorradiografia , Bovinos , Genótipo , Masculino , Paternidade , Probabilidade
20.
Mamm Genome ; 8(1): 29-36, 1997 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-9021144

RESUMO

The mapping strategy for the bovine genome described in this paper uses large insert clones as a tool for physical mapping and as a source of highly polymorphic microsatellites for genetic typing, and was one objective of the BovMap Project funded by the European Union (UE). Eight-three cosmid and phage clones were characterized and used to physically anchor the linkage groups defining all the bovine autosomes and the X Chromosome (Chr). By combining physical and genetic mapping, clones described in this paper have led to the identification of the linkage groups corresponding to Chr 9, 12, 16, and 25. In addition, anchored loci from this study were used to orient the linkage groups corresponding to Chr 3, 7, 8, 9, 13, 16, 18, 19, and 28 as identified in previously published maps. Comparison of the estimated size of the physical and linkage maps suggests that the genetic length of the bovine genome may be around 4000 cM.


Assuntos
Bovinos/genética , Mapeamento Cromossômico , Cosmídeos/genética , Repetições de Microssatélites , Animais , Bandeamento Cromossômico , Feminino , Ligação Genética , Masculino , Sitios de Sequências Rotuladas
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