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1.
J Chem Theory Comput ; 7(10): 3335-3345, 2011 Oct 11.
Artigo em Inglês | MEDLINE | ID: mdl-22076120

RESUMO

Charge carrier dynamics in an organic semiconductor can often be described in terms of charge hopping between localized states. The hopping rates depend on electronic coupling elements, reorganization energies, and driving forces, which vary as a function of position and orientation of the molecules. The exact evaluation of these contributions in a molecular assembly is computationally prohibitive. Various, often semiempirical, approximations are employed instead. In this work, we review some of these approaches and introduce a software toolkit which implements them. The purpose of the toolkit is to simplify the workflow for charge transport simulations, provide a uniform error control for the methods and a flexible platform for their development, and eventually allow in silico prescreening of organic semiconductors for specific applications. All implemented methods are illustrated by studying charge transport in amorphous films of tris-(8-hydroxyquinoline)aluminum, a common organic semiconductor.

2.
J Chem Phys ; 133(13): 134901, 2010 Oct 07.
Artigo em Inglês | MEDLINE | ID: mdl-20942556

RESUMO

Charge transport properties of a columnar mesophase of carbazole macrocycles are analyzed. Realistic morphologies are sampled using all-atom molecular dynamics simulations while charge transport is simulated using the kinetic Monte Carlo method with transfer rates obtained from the high temperature nonadiabatic limit of Marcus theory. It is shown that the molecular design with side chains pointing inside the macrocycle allows close approach between molecules of neighboring columns, thus enabling three-dimensional transport and helping to circumvent charge trapping on structural defects.

3.
J Am Chem Soc ; 132(33): 11702-8, 2010 Aug 25.
Artigo em Inglês | MEDLINE | ID: mdl-20666495

RESUMO

We analyze the relationship among the molecular structure, morphology, percolation network, and charge carrier mobility in four organic crystals: rubrene, indolo[2,3-b]carbazole with CH(3) side chains, and benzo[1,2-b:4,5-b']bis[b]benzothiophene derivatives with and without C(4)H(9) side chains. Morphologies are generated using an all-atom force field, while charge dynamics is simulated within the framework of high-temperature nonadiabatic Marcus theory or using semiclassical dynamics. We conclude that, on the length scales reachable by molecular dynamics simulations, the charge transport in bulk molecular crystals is mostly limited by the dynamic disorder, while in self-assembled monolayers the static disorder, which is due to the slow motion of the side chains, enhances charge localization and influences the transport dynamics. We find that the presence of disorder can either reduce or increase charge carrier mobility, depending on the dimensionality of the charge percolation network. The advantages of charge transporting materials with two- or three-dimensional networks are clearly shown.


Assuntos
Carbazóis/química , Simulação de Dinâmica Molecular , Naftacenos/química , Tiofenos/química , Estrutura Molecular
4.
J Chem Phys ; 129(9): 094505, 2008 Sep 07.
Artigo em Inglês | MEDLINE | ID: mdl-19044875

RESUMO

Using atomistic molecular dynamic simulations we study the transitions between solid herringbone and liquid crystalline hexagonal mesophases of discotic liquid crystals formed by hexabenzocoronene derivatives. Combining a united atom representation for the side chains with the fully atomistic description of the core, we study the effect of side chain substitution on the transition temperatures as well as molecular ordering in the mesophases. Our study rationalizes the differences in charge carrier mobilities in the herringbone and hexagonal mesophases, which is predominantly due to the better rotational register of the neighboring molecules.


Assuntos
Simulação por Computador , Modelos Químicos , Compostos Policíclicos/química , Teoria Quântica , Cristais Líquidos/química , Estrutura Molecular , Método de Monte Carlo , Transição de Fase , Rotação , Temperatura
5.
Eur Biophys J ; 37(2): 197-204, 2008 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-17851658

RESUMO

We have investigated the mechanical properties of spider dragline fibers of three Nephila species under varied relative humidity. Force maps have been collected by atomic force microscopy. The Young's modulus E was derived from the indentation curves of each pixel by the modified Hertz model. An average decrease in E by an order of magnitude was observed upon immersion of the fiber in water. Single fiber stretching experiments were carried out for comparison, and also showed a strong dependence on relative humidity. However, the absolute values of E are significantly higher than those obtained by indentation. The results of this work thus show that the elastic properties of spider silk are highly anisotropic, and that the silk softens significantly for both tensile and compressional strain (indentation) upon water uptake. In addition, the force maps indicate a surface structure on the sub-micron scale.


Assuntos
Fibroínas/química , Microscopia de Força Atômica , Aranhas/efeitos dos fármacos , Água/farmacologia , Animais , Elasticidade/efeitos dos fármacos , Umidade , Estresse Mecânico , Propriedades de Superfície/efeitos dos fármacos
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