Decomposing Neural Circuit Function into Information Processing Primitives.

It is challenging to measure how specific aspects of coordinated neural dynamics translate into operations of information processing and, ultimately, cognitive functions. An obstacle is that simple circuit mechanisms-such as self-sustained or propagating activity and nonlinear summation of inputs-do not directly give rise to high-level functions. Nevertheless, they already implement simple the information carried by neural activity. Here, we propose that distinct functions, such as stimulus representation, working memory, or selective attention, stem from different combinations and types of low-level manipulations of information or information processing primitives. To test this hypothesis, we combine approaches from information theory with simulations of multi-scale neural circuits involving interacting brain regions that emulate well-defined cognitive functions. Specifically, we track the information dynamics emergent from patterns of neural dynamics, using quantitative metrics to detect where and when information is actively buffered, transferred or nonlinearly merged, as possible modes of low-level processing (storage, transfer and modification). We find that neuronal subsets maintaining representations in working memory or performing attentional gain modulation are signaled by their boosted involvement in operations of information storage or modification, respectively. Thus, information dynamic metrics, beyond detecting which network units participate in cognitive processing, also promise to specify how and when they do it, that is, through which type of primitive computation, a capability that may be exploited for the analysis of experimental recordings.

Connectivity concepts in neuronal network modeling.

Sustainable research on computational models of neuronal networks requires published models to be understandable, reproducible, and extendable. Missing details or ambiguities about mathematical concepts and assumptions, algorithmic implementations, or parameterizations hinder progress. Such flaws are unfortunately frequent and one reason is a lack of readily applicable standards and tools for model description. Our work aims to advance complete and concise descriptions of network connectivity but also to guide the implementation of connection routines in simulation software and neuromorphic hardware systems. We first review models made available by the computational neuroscience community in the repositories ModelDB and Open Source Brain, and investigate the corresponding connectivity structures and their descriptions in both manuscript and code. The review comprises the connectivity of networks with diverse levels of neuroanatomical detail and exposes how connectivity is abstracted in existing description languages and simulator interfaces. We find that a substantial proportion of the published descriptions of connectivity is ambiguous. Based on this review, we derive a set of connectivity concepts for deterministically and probabilistically connected networks and also address networks embedded in metric space. Beside these mathematical and textual guidelines, we propose a unified graphical notation for network diagrams to facilitate an intuitive understanding of network properties. Examples of representative network models demonstrate the practical use of the ideas. We hope that the proposed standardizations will contribute to unambiguous descriptions and reproducible implementations of neuronal network connectivity in computational neuroscience.

Global organization of neuronal activity only requires unstructured local connectivity.

Modern electrophysiological recordings simultaneously capture single-unit spiking activities of hundreds of neurons spread across large cortical distances. Yet, this parallel activity is often confined to relatively low-dimensional manifolds. This implies strong coordination also among neurons that are most likely not even connected. Here, we combine in vivo recordings with network models and theory to characterize the nature of mesoscopic coordination patterns in macaque motor cortex and to expose their origin: We find that heterogeneity in local connectivity supports network states with complex long-range cooperation between neurons that arises from multi-synaptic, short-range connections. Our theory explains the experimentally observed spatial organization of covariances in resting state recordings as well as the behaviorally related modulation of covariance patterns during a reach-to-grasp task. The ubiquity of heterogeneity in local cortical circuits suggests that the brain uses the described mechanism to flexibly adapt neuronal coordination to momentary demands.

On the Complexity of Resting State Spiking Activity in Monkey Motor Cortex.

Resting state has been established as a classical paradigm of brain activity studies, mostly based on large-scale measurements such as functional magnetic resonance imaging or magneto- and electroencephalography. This term typically refers to a behavioral state characterized by the absence of any task or stimuli. The corresponding neuronal activity is often called idle or ongoing. Numerous modeling studies on spiking neural networks claim to mimic such idle states, but compare their results with task- or stimulus-driven experiments, or to results from experiments with anesthetized subjects. Both approaches might lead to misleading conclusions. To provide a proper basis for comparing physiological and simulated network dynamics, we characterize simultaneously recorded single neurons' spiking activity in monkey motor cortex at rest and show the differences from spontaneous and task- or stimulus-induced movement conditions. We also distinguish between rest with open eyes and sleepy rest with eyes closed. The resting state with open eyes shows a significantly higher dimensionality, reduced firing rates, and less balance between population level excitation and inhibition than behavior-related states.

Evaluation of Spike Sorting Algorithms: Application to Human Subthalamic Nucleus Recordings and Simulations.

An important prerequisite for the analysis of spike synchrony in extracellular recordings is the extraction of single-unit activity from the multi-unit signal. To identify single units, potential spikes are separated with respect to their potential neuronal origins ('spike sorting'). However, different sorting algorithms yield inconsistent unit assignments, which seriously influences subsequent spike train analyses. We aim to identify the best sorting algorithm for subthalamic nucleus recordings of patients with Parkinson's disease (experimental data ED). Therefore, we apply various prevalent algorithms offered by the 'Plexon Offline Sorter' and evaluate the sorting results. Since this evaluation leaves us unsure about the best algorithm, we apply all methods again to artificial data (AD) with known ground truth. AD consists of pairs of single units with different shape similarity embedded in the background noise of the ED. The sorting evaluation depicts a significant influence of the respective methods on the single unit assignments. We find a high variability in the sortings obtained by different algorithms that increases with single units shape similarity. We also find significant differences in the resulting firing characteristics. We conclude that Valley-Seeking algorithms produce the most accurate result if the exclusion of artifacts as unsorted events is important. If the latter is less important ('clean' data) the K-Means algorithm is a better option. Our results strongly argue for the need of standardized validation procedures based on ground truth data. The recipe suggested here is simple enough to become a standard procedure.

Reactive searching and infotaxis in odor source localization.

Male moths aiming to locate pheromone-releasing females rely on stimulus-adapted search maneuvers complicated by a discontinuous distribution of pheromone patches. They alternate sequences of upwind surge when perceiving the pheromone and cross- or downwind casting when the odor is lost. We compare four search strategies: three reactive versus one cognitive. The former consist of pre-programmed movement sequences triggered by pheromone detections while the latter uses Bayesian inference to build spatial probability maps. Based on the analysis of triphasic responses of antennal lobe neurons (On, inhibition, Off), we propose three reactive strategies. One combines upwind surge (representing the On response to a pheromone detection) and spiral casting, only. The other two additionally include crosswind (zigzag) casting representing the Off phase. As cognitive strategy we use the infotaxis algorithm which was developed for searching in a turbulent medium. Detection events in the electroantennogram of a moth attached to a robot indirectly control this cyborg, depending on the strategy in use. The recorded trajectories are analyzed with regard to success rates, efficiency, and other features. In addition, we qualitatively compare our robotic trajectories to behavioral search paths. Reactive searching is more efficient (yielding shorter trajectories) for higher pheromone doses whereas cognitive searching works better for lower doses. With respect to our experimental conditions (2 m from starting position to pheromone source), reactive searching with crosswind zigzag yields the shortest trajectories (for comparable success rates). Assuming that the neuronal Off response represents a short-term memory, zigzagging is an efficient movement to relocate a recently lost pheromone plume. Accordingly, such reactive strategies offer an interesting alternative to complex cognitive searching.

Multiphasic on/off pheromone signalling in moths as neural correlates of a search strategy.

Insects and robots searching for odour sources in turbulent plumes face the same problem: the random nature of mixing causes fluctuations and intermittency in perception. Pheromone-tracking male moths appear to deal with discontinuous flows of information by surging upwind, upon sensing a pheromone patch, and casting crosswind, upon losing the plume. Using a combination of neurophysiological recordings, computational modelling and experiments with a cyborg, we propose a neuronal mechanism that promotes a behavioural switch between surge and casting. We show how multiphasic On/Off pheromone-sensitive neurons may guide action selection based on signalling presence or loss of the pheromone. A Hodgkin-Huxley-type neuron model with a small-conductance calcium-activated potassium (SK) channel reproduces physiological On/Off responses. Using this model as a command neuron and the antennae of tethered moths as pheromone sensors, we demonstrate the efficiency of multiphasic patterning in driving a robotic searcher toward the source. Taken together, our results suggest that multiphasic On/Off responses may mediate olfactory navigation and that SK channels may account for these responses.

Parallactic movement beats binocularity in the presence of external visual noise.

PURPOSE: Binocular vision provides a considerable advantage over monocular vision when stationary particles partly obstruct the view. Such situations occur in real life, e.g., when drivers are trying to identify objects through a windshield dotted with snowflakes. In the process of driving, any bumpiness of the road will bring about a parallactic movement of particles on the windshield with respect to the visual object. We investigated whether this parallactic movement diminishes the advantage of binocular over monocular vision. METHODS: Using computer graphics, we simulated a driving situation with snowflakes represented by noise particles on the windshield. Ten observers tried to identify a Landolt ring (8 possible orintations, gap always 2.5 arcmin) presented for 2 s at a viewing distance of 2 m. The partly obstructing noise particles, either stationary or moving vertically at three sinusoidal velocities, were presented at a viewing distance of 0.8 m, corresponding to a stereodisparity well beyond Panum's fusional area. We compared the percentage of correct responses and the reaction time between binocular and monocular vision. RESULTS: When the 'snowflakes' were stationary, binocular vision yielded more correct responses than monocular vision (52.2 ± 1.8% vs 39.7 ± 1.7%). When the 'snowflakes' were moving, the task was much easier and the binocular advantage less pronounced (95.8 ± 1.4% vs 85.3 ± 5.2%). The reaction time with stationary noise was 1.25 s for binocular and 1.31 s for monocular vision. With moving noise, averaged over all three velocities, the reaction time was 1.23 s for binocular and 1.36 s for monocular vision. CONCLUSION: Parallactic movement of partly obstructing particles reduces the advantage of binocular over monocular vision to practically irrelevant values.

Modeling of the neurovascular coupling in epileptic discharges.

Despite the interest in simultaneous EEG-fMRI studies of epileptic spikes, the link between epileptic discharges and their corresponding hemodynamic responses is poorly understood. In this context, biophysical models are promising tools for investigating the mechanisms underlying observed signals. Here, we apply a metabolic-hemodynamic model to simulated epileptic discharges, in part generated by a neural mass model. We analyze the effect of features specific to epileptic neuronal activity on the blood oxygen level dependent (BOLD) response, focusing on the issues of linearity in neurovascular coupling and on the origin of negative BOLD signals. We found both sub- and supra-linearity in simulated BOLD signals, depending on whether one observes the early or the late part of the BOLD response. The size of these non-linear effects is determined by the spike frequency, as well as by the amplitude of the excitatory activity. Our results additionally indicate a minor deviation from linearity at the neuronal level. According to a phase space analysis, the possibility to obtain a negative BOLD response to an epileptic spike depends on the existence of a long and strong excitatory undershoot. Moreover, we strongly suggest that a combined EEG-fMRI modeling approach should include spatial assumptions. The present study is a step towards an increased understanding of the link between epileptic spikes and their BOLD responses, aiming to improve the interpretation of simultaneous EEG-fMRI recordings in epilepsy.

Relationship between flow and metabolism in BOLD signals: insights from biophysical models.

In many physiological or pathological situations, the interpretation of BOLD signals remains elusive as the intimate link between neuronal activity and subsequent flow/metabolic changes is not fully understood. During the past decades, a number of biophysical models of the neurovascular coupling have been proposed. It is now well-admitted that these models may bridge between observations (fMRI data) and underlying biophysical and (patho-)physiological mechanisms (related to flow and metabolism) by providing mechanistic explanations. In this study, three well-established models (Buxton's, Friston's and Sotero's) are investigated. An exhaustive parameter sensitivity analysis (PSA) was conducted to study the marginal and joint influences of model parameters on the three main features of the BOLD response (namely the principal peak, the post-stimulus undershoot and the initial dip). In each model, parameters that have the greatest (and least) influence on the BOLD features as well as on the direction of variation of these features were identified. Among the three studied models, parameters were shown to affect the output features in different manners. Indeed, the main parameters revealed by the PSA were found to strongly depend on the way the flow(CBF)-metabolism(CMRO(2)) relationship is implemented (serial vs. parallel). This study confirmed that the model structure which accounts for the representation of the CBF-CMRO(2) relationship (oxygen supply by the flow vs. oxygen demand from neurons) plays a key role. More generally, this work provides substantial information about the tuning of parameters in the three considered models and about the subsequent interpretation of BOLD signals based on these models.

A modeler's view on the spatial structure of intrinsic horizontal connectivity in the neocortex.

Most current computational models of neocortical networks assume a homogeneous and isotropic arrangement of local synaptic couplings between neurons. Sparse, recurrent connectivity is typically implemented with simple statistical wiring rules. For spatially extended networks, however, such random graph models are inadequate because they ignore the traits of neuron geometry, most notably various distance dependent features of horizontal connectivity. It is to be expected that such non-random structural attributes have a great impact, both on the spatio-temporal activity dynamics and on the biological function of neocortical networks. Here we review the neuroanatomical literature describing long-range horizontal connectivity in the neocortex over distances of up to eight millimeters, in various cortical areas and mammalian species. We extract the main common features from these data to allow for improved models of large-scale cortical networks. Such models include, next to short-range neighborhood coupling, also long-range patchy connections. We show that despite the large variability in published neuroanatomical data it is reasonable to design a generic model which generalizes over different cortical areas and mammalian species. Later on, we critically discuss this generalization, and we describe some examples of how to specify the model in order to adapt it to specific properties of particular cortical areas or species.

Phase space analysis of networks based on biologically realistic parameters.

We study cortical network dynamics for a spatially embedded network model. It represents, in terms of spatial scale, a large piece of cortex allowing for long-range connections, resulting in a rather sparse connectivity. The spatial embedding also permits us to include distance-dependent conduction delays. We use two different types of conductance-based I&F neurons as excitatory and inhibitory units, as well as specific connection probabilities. In order to remain computationally tractable, we reduce neuron density, modelling part of the missing internal input via external poissonian spike trains. Compared to previous studies, we observe significant changes in the dynamical phase space: Altered activity patterns require another regularity measures than the coefficient of variation. Hence, we compare three different regularity measure on the basis of artificial inter-spike-interval distributions. We identify two types of mixed states, where different phases coexist in certain regions of the phase space. More notably, our boundary between high and low activity states depends predominantly on the relation between excitatory and inhibitory synaptic strength instead of the input rate.

Models of cortical networks with long-range patchy projections.

The cortex exhibits an intricate vertical and horizontal architecture, the latter often featuring spatially clustered projection patterns, so-called patches. Many network studies of cortical dynamics ignore such spatial structures and assume purely random wiring. Here, we focus on non-random network structures provided by long-range horizontal (patchy) connections that remain inside the gray matter. We investigate how the spatial arrangement of patchy projections influences global network topology and predict its impact on the activity dynamics of the network. Since neuroanatomical data on horizontal projections is rather sparse, we suggest and compare four candidate scenarios of how patchy connections may be established. To identify a set of characteristic network properties that enables us to pin down the differences between the resulting network models, we employ the framework of stochastic graph theory. We find that patchy projections provide an exceptionally efficient way of wiring, as the resulting networks tend to exhibit small-world properties with significantly reduced wiring costs. Furthermore, the eigenvalue spectra, as well as the structure of common in- and output of the networks suggest that different spatial connectivity patterns support distinct types of activity propagation.

Diversity in the executive suite. Modern Healthcare salutes the Top 25 Minority Executives in Healthcare, who say their colleagues still face numerous obstacles.

With minorities expected to swell to half of all U.S. residents by 2050, the healthcare C-suite needs to reflect that diversity to better meet patients' needs. We honor the Top 25 Minority Executives in Healthcare, who have found ways to help others along the way. "I've learned to navigate within a system and work with people for the greater good, says Christopher Mosley, left, who made the Top 25.