Effects of the seedling tray overlapping for seed emergence mode on emergence characteristics and growth of rice seedlings.

Seedling mode plays a crucial role in the rice production process, as it significantly affects the growth and development of seedlings. Among the various seedling modes, the seedling tray overlapping for seed emergence mode (STOSE mode) has been demonstrated to be effective in enhancing seedling quality. However, the impact of this mode on the germination and growth of seeds with varying plumpness remains uncertain. To investigate the effect of the STOSE mode on seedling emergence characteristics, growth uniformity, and nutrient uptake of seeds with varying plumpness levels, we conducted a study using super early rice Zhongzao 39 (ZZ39) as the test material. The seeds were categorized into three groups: plumped, mixed, and unplumped. The results indicated that the STOSE mode significantly improved the seedling rate for all types of seeds in comparison to the seedling tray nonoverlapping for seed emergence mode (TSR mode). Notably, the unplumped seeds exhibited the most pronounced enhancement effect. The soluble sugar content of the seeds increased significantly after 2 days of sowing under the STOSE mode, whereas the starch content exhibited a significant decrease. Furthermore, the STOSE mode outperformed the TSR mode in several aspects including seedling growth uniformity, aboveground dry matter mass, root traits, and nutrient uptake. Overall, the STOSE mode not only promoted the germination and growth of plumped and mixed seeds but also had a more pronounced impact on unplumped seeds.

Comparative Transcriptome Combined with Morphophysiological Analyses Revealed Carotenoid Biosynthesis for Differential Chilling Tolerance in Two Contrasting Rice (Oryza sativa L.) Genotypes.

Early spring cold spells can lead to leaf chlorosis during the rice seedling greening process. However, the physiological and molecular mechanisms underlying the rice greening process under low-temperature conditions remain unknown. In this study, comparative transcriptome and morphophysiological analyses were performed to investigate the mechanisms mediating the responses of the Koshihikari (Kos) and Kasalath (Kas) rice cultivars to chilling stress. According to their growth-related traits, electrolyte leakage, and chlorophyll fluorescence parameters, Kos was more tolerant to low-temperature stress than Kas. Moreover, chloroplast morphology was more normal (e.g., oval) in Kos than in Kas at 17 °C. The comparative transcriptome analysis revealed 610 up-regulated differentially expressed genes that were common to all four comparisons. Furthermore, carotenoid biosynthesis was identified as a critical pathway for the Kos response to chilling stress. The genes in the carotenoid biosynthesis pathway were expressed at higher levels in Kos than in Kas at 17 °C, which was in accordance with the higher leaf carotenoid content in Kos than in Kas. The lycopene ß-cyclase and lycopene ε-cyclase activities increased more in Kos than in Kas. Additionally, the increases in the violaxanthin de-epoxidase and carotenoid hydroxylase activities in Kos seedlings resulted in the accumulation of zeaxanthin and lutein and mitigated the effects of chilling stress on chloroplasts. These findings have clarified the molecular mechanisms underlying the chilling tolerance of rice seedlings during the greening process.

Sensitivity Analysis of RV Reducer Rotation Error Based on Deep Gaussian Processes.

The rotation error is the most important quality characteristic index of a rotate vector (RV) reducer, and it is difficult to accurately optimize the design of a RV reducer, such as the Taguchi type, due to the many factors affecting the rotation error and the serious coupling effect among the factors. This paper analyzes the RV reducer rotation error and each factor based on the deep Gaussian processes (DeepGP) model and Sobol sensitivity analysis(SA) method. Firstly, using the optimal Latin hypercube sampling (OLHS) approach and the DeepGP model, a high-precision regression prediction model of the rotation error and each affecting factor was created. On the basis of the prediction model, the Sobol method was used to conduct a global SA of the factors influencing the rotation error and to compare the coupling relationship between the factors. The results show that the OLHS method and the DeepGP model are suitable for predicting the rotation error in this paper, and the accuracy of the prediction model constructed based on both of them is as high as 95%. The rotation error mainly depends on the influencing factors in the second stage cycloidal pinwheel drive part. The primary involute planetary part and planetary output carrier's rotation error factors have little effect. The coupling effects between the matching clearance between the pin gear and needle gear hole (δJ) and the circular position error of the needle gear hole (δt) is noticeably stronger.

OsPPR11 encoding P-type PPR protein that affects group II intron splicing and chloroplast development.

KEY MESSAGE: OsPPR11 belongs to the P-type PPR protein family and can interact with OsCAF2 to regulate Group II intron splicing and affect chloroplast development in rice. Pentatricopeptide repeat (PPR) proteins participate in chloroplasts or mitochondria group II introns splicing in plants. The PPR protein family contains 491 members in rice, but most of their functions are unknown. In this study, we identified a nuclear gene encoding the P-type PPR protein OsPPR11 in chloroplasts. The qRT-PCR analysis demonstrated that OsPPR11 was expressed in all plant tissues, but leaves had the highest expression. The osppr11 mutants had yellowing leaves and a lethal phenotype that inhibited chloroplast development and photosynthesis-related gene expression and reduced photosynthesis-related protein accumulation in seedlings. Moreover, photosynthetic complex accumulation decreased significantly in osppr11 mutants. The OsPPR11 is required for ndhA, and ycf3-1 introns splicing and interact with CRM family protein OsCAF2, suggesting that these two proteins may form splicing complexes to regulate group II introns splicing. Further analysis revealed that OsCAF2 interacts with OsPPR11 through the N-terminus. These results indicate that OsPPR11 is essential for chloroplast development and function by affecting group II intron splicing in rice.

Study on an Assembly Prediction Method of RV Reducer Based on IGWO Algorithm and SVR Model.

This paper proposes a new method for predicting rotation error based on improved grey wolf-optimized support vector regression (IGWO-SVR), because the existing rotation error research methods cannot meet the production beat and product quality requirements of enterprises, because of the disadvantages of its being time-consuming and having poor calculation accuracy. First, the grey wolf algorithm is improved based on the optimal Latin hypercube sampling initialization, nonlinear convergence factor, and dynamic weights to improve its accuracy in optimizing the parameters of the support vector regression (SVR) model. Then, the IGWO-SVR prediction model between the manufacturing error of critical parts and the rotation error is established with the RV-40E reducer as a case. The results show that the improved grey wolf algorithm shows better parameter optimization performance, and the IGWO-SVR method shows better prediction performance than the existing back propagation (BP) neural network and BP neural network optimized by the sparrow search algorithm rotation error prediction methods, as well as the SVR models optimized by particle swarm algorithm and grey wolf algorithm. The mean squared error of IGWO-SVR model is 0.026, the running time is 7.843 s, and the maximum relative error is 13.5%, which can meet the requirements of production beat and product quality. Therefore, the IGWO-SVR method can be well applied to the rotate vector (RV) reducer parts-matching model to improve product quality and reduce rework rate and cost.

Leaf surface characteristics affect the deposition and distribution of droplets in rice (Oryza sativa L.).

We studied the effects of leaf surface characteristics on canopy droplet behaviour using two rice cultivars with similar leaf shapes but significantly different leaf surface characteristics: Jia58 (glabrous rice; smooth leaf surface and no burrs) and Yongyou12 (hairy-leaved rice; rough leaf surface covered with burrs). The plants were subjected to spray tests with different spray pressures and nozzle apertures. The results showed that the deposition amount per unit leaf area was significantly higher in the Yongyou12 canopy than in the Jia58 canopy. The diameter, volume median diameter, number median diameter, and coverage of droplets were significantly higher in Yongyou12 than in Jia58, while the coverage density of droplets was significantly lower. The proportion of small droplets of Jia58 is higher than that of Yongyou12. Thus, a larger amount of large-sized droplets could retain on the leaf surface of hairy-leaved rice, and a larger number of small-sized droplets were retained on the leaf surface of glabrous rice. Smaller pressure and larger flow nozzle were conducive to the retention of the Jia58, while Yongyou12 required larger pressure and larger flow nozzles. Ultrastructural analyses revealed that the leaf surface of glabrous rice had no trichomes and more wax than hairy-leaved rice, and the critical surface tension was lower, resulting in the retention of mainly small droplets on its leaf surface and a lower deposition amount. Therefore, in order to increase the deposition of pesticide droplets on the leaf surface in production, glabrous rice should choose nozzles with smaller spray pressure and large flow rate.

OsMORF9 is necessary for chloroplast development and seedling survival in rice.

Chloroplasts are closely associated with the growth and development of higher plants. Accumulating evidence has revealed that the multiple organellar RNA editing factors (MORF) family of proteins influences plastidic and mitochondrial development through post-transcriptional regulation. However, the role of MORFs in regulating the development of chloroplasts in rice is still unclear. The OsMORF9 gene belongs to a small family of 7 genes in rice and is highly expressed in young leaves. We used the CRISPR/Cas9 system to mutate OsMORF9. The resulting knockout lines osmorf9-1 and osmorf9-2 exhibited an albino seedling lethal phenotype. Besides, the expression of many plastid-encoded genes involved in photosynthesis, the biogenesis of plastidic ribosomes and the editing and splicing of specific plastidic RNA molecules were severely affected in these two OsMORF9 mutants. Furthermore, yeast two-hybrid analysis revealed that OsMORF9 could interact with OsSLA4 and DUA1 which are members of the pentatricopeptide repeat (PPR) family of proteins. Analysis of subcellular localization of OsMORF9 also suggested that it might function in chloroplasts. The findings from the present study demonstrated the critical role of OsMORF9 in the biogenesis of chloroplast ribosomes, chloroplast development and seedling survival. This therefore provides new insights on the function of MORF proteins in rice.

The nitrogen topdressing mode of indica-japonica and indica hybrid rice are different after side-deep fertilization with machine transplanting.

Determination of the optimal fertilization method is crucial to maximize nitrogen use efficiency and yield of different rice cultivars. Side-deep fertilization with controlled-release nitrogen, in conjunction with machine transplanting and subsequent topdressing, was applied to Indica-japonica hybrid rice 'Yongyou1540' (YY1540) and indica hybrid rice 'Tianyouhuazhan' (TYHZ). Four nitrogen treatments were applied in 2018 and 2019: traditional nitrogen application with quick-release nitrogen (T1), single-dose deep fertilization at transplanting with 100% controlled-release nitrogen (T2), and deep fertilization of 70% controlled-release nitrogen and topdressing of 30% quick nitrogen at tillering (T3), or at panicle initiation (T4). Side-deep fertilization reduced the fertilizer application frequency without causing yield loss, T4 enhanced the yield of YY1540 by increasing the number of productive tillers and number of spikelets per panicle compared with T1, T2 and T3. The yield of TYHZ showed no significant difference among treatments. The T4 treatment decreased the number of tillers at the tilling peak stage and increased the percentage productive tillers and number of differentiated spikelets. Compared with the other treatments, T4 increased dry matter accumulation and leaf area index during panicle initiation and grain ripening, and contributed to enhanced nitrogen uptake and nitrogen utilization in YY1540. On average, nitrogen uptake and utilization in YY1540 were highest in T4, but no significant differences among treatments were observed in TYHZ. Dry matter accumulation and nitrogen uptake from panicle initiation to heading of YY1540 were correlated with number of spikelets per panicle, but no significant correlations were observed for TYHZ. Supplementary topdressing with quick-release nitrogen at the panicle initiation stage was required to increase yield of indica-japonica hybrid rice, whereas single-dose deep fertilization with controlled-release nitrogen is satisfactory for the indica hybrid cultivar.

Genetic analysis of rice seedling traits related to machine transplanting under different seeding densities.

BACKGROUND: Due to the diversity of rice varieties and cropping systems in China, the limitation of seeding density and seedling quality makes it hard to improve machine-transplanted efficiency. Previous studies have shown that indica and japonica varieties varied in machine transplanting efficiency and optimal seeding density. In this study, a RIL population derived from '9311' and 'Nipponbare' were performed to explore the seedling traits variations and the genetic mechanism under three seeding densities. RESULTS: The parents and RIL population exhibited similar trends as the seeding density increased, including seedling height and first leaf sheath length increases, shoot dry weight and root dry weight decreases. Among the 37 QTLs for six traits detected under the three seeding densities, 12 QTLs were detected in both three seeding densities. Five QTL hotspots identified clustered within genomic regions on chromosomes 1, 2, 4, 6 and 11. Specific QTLs such as qRDW1.1 and qFLSL5.1 were detected under low and high seeding densities, respectively. Detailed analysis the QTL regions identified under specific seeding densities revealed several candidate genes involved in phytohormones signals and abiotic stress responses. Whole-genome additive effects showed that '9311' contributed more loci enhancing trait performances than 'Nipponbare', indicating '9311' was more sensitive to the seeding density than 'Nipponbare'. The prevalence of negative epistasis effects indicated that the complementary two-locus homozygotes may not have marginal advantages over the means of the two parental genotypes. CONCLUSIONS: Our results revealed the differences between indica rice and japonica rice seedling traits in response to seeding density. Several QTL hotspots involved in different traits and specific QTLs (such as qRDW1.1 and qFLSL5.1) in diverse seeding densities had been detected. Genome-wide additive and two-locus epistasis suggested a dynamic of the genetic control underlying different seeding densities. It was concluded that novel QTLs, additive and epistasis effects under specific seeding density would provide adequate information for rice seedling improvement during machine transplanting.

Comparative transcriptome analysis of panicle development under heat stress in two rice (Oryza sativa L.) cultivars differing in heat tolerance.

Heat stress inhibits rice panicle development and reduces the spikelet number per panicle. This study investigated the mechanism involved in heat-induced damage to panicle development and spikelet formation in rice cultivars that differ in heat tolerance. Transcriptome data from developing panicles grown at 40 °C or 32 °C were compared for two rice cultivars: heat-tolerant Huanghuazhan and heat-susceptible IR36. Of the differentially expressed genes (DEGs), 4,070 heat stress-responsive genes were identified, including 1,688 heat-resistant-cultivar-related genes (RHR), 707 heat-susceptible-cultivar-related genes (SHR), and 1,675 common heat stress-responsive genes (CHR). A Gene Ontology (GO) analysis showed that the DEGs in the RHR category were significantly enriched in 54 gene ontology terms, some of which improved heat tolerance, including those in the WRKY, HD-ZIP, ERF, and MADS transcription factor families. A Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis showed that the DEGs in the RHR and SHR categories were enriched in 15 and 11 significant metabolic pathways, respectively. Improved signal transduction capabilities of endogenous hormones under high temperature seemed to promote heat tolerance, while impaired starch and sucrose metabolism under high temperature might have inhibited young panicle development. Our transcriptome analysis provides insights into the different molecular mechanisms of heat stress tolerance in developing rice.

Real-time analysis of the homogeneous and heterogeneous reactions of pyrene with ozone by SPAMS and CRD-EAS.

Single particle aerosol mass spectrometry (SPAMS) and Cavity ring-down aerosol extinction albedo spectroscopy (CRD-EAS) were applied in this work to real-time investigate the chemical and physical characteristics of the homogeneous and heterogeneous reactions of O3 with pyrene in a Teflon reaction chamber. Suspended pyrene coated polystyrene latex spheres (PSLs) were generated by vaporization-condensation. Ozonation products and particle size distribution during the reactions were detected in real-time using a SPAMS instrument. Among these products, the peaks at m/z of 262 and 278, assigned to 4,5,9,10-dipyrenequinone and 1-hydroxy-4,5,9,10-dipyrenequinone, respectively, were first detected to our knowledge. The mechanism for the formation of reaction product was also proposed based on the real time monitoring. With increasing the ozone concentration, the size growth of the original pyrene-coated particles and the formation of new fine particles and size growth were observed continuously. The optical characteristics were also investigated using a laboratory-developed CRD-EAS instrument. The extinction and scattering coefficients were observed to increase approximately five and four times, respectively. The absorption coefficient also increased because more polar oxidation products coated on the particles exhibiting higher light absorption ability than pyrene, and meanwhile, the single scattering albedo reduced from 0.88 to 0.77 which indicated the reactions could cause positive climate forcing. Using the on-line mass spectrometry and optic spectroscopy instruments, a systematic analysis method was developed to characterize the chemical and physical properties of homogeneous and heterogeneous reactions in real-time, which will help to investigate and understand the formation of new particles and particle growth in the atmosphere.

Reduced bioactive gibberellin content in rice seeds under low temperature leads to decreased sugar consumption and low seed germination rates.

GA is important for rice seed germination, and seed embryo growth relies on sugar supplementation via starch hydrolysis in the endosperm. Low temperature reduces the seed germination rates of rice; however, the mechanism of GA metabolism and its impact on sugar utilization of germinating seeds under low temperature conditions remain poorly understood. In this study, low-temperature (15 °C) treatment delayed rice (Oryza sativa L.) seed germination, promoted GA deactivation, inhibited GA signal transduction, and increased ABA synthesis in the seed compared with normal treatment (30 °C). Under low temperature conditions, the soluble sugar content in endosperm was reduced along with depression of the specific activity levels of α-amylase (EC 3.2.1.1) and ß-amylase (EC 3.2.1.2), but the soluble sugar content was increased in the embryo compared with the control treatment. Low temperature treatment promoted sugar transportation from endosperm to embryo and reduced the activity levels of enzymes involved in glycolysis and the tricarboxylic acid cycle, which participated in sugar consumption. Exogenous GA3 application (10 µM) prompted GA signal transduction and inhibited ABA synthesis, while enhancing starch hydrolysis and sugar consumption to boost rice seed germination under low temperature conditions. In conclusion, a deficiency of bioactive GAs in rice seeds exposed to low temperature led to a decrement in starch hydrolysis and sugar consumption, thus inhibit seed germination.

Spray-inlet microwave plasma torch ionization tandem mass spectrometry for the direct detection of drug samples in liquid solutions.

RATIONALE: Drug abuse or dependence results in a series of social problems, including crime and traffic accidents. Spray-inlet microwave plasma torch tandem mass spectrometry (MPT-MS/MS) was developed and used for the direct detection of such drugs in liquid solutions. METHODS: Drug sample solutions were directly sprayed into the flame of an MPT by a sampling pump and the ions produced by Penning ionization and ion-molecule reactions were guided into a quadrupole time-of-flight (QTOF) tandem mass spectrometer for mass analysis. The MPT was operated at 40 W and 2.45 GHz in a 700 mL/min argon flow both for the inner and middle plasma. RESULTS: Intact quasi-molecular and molecular ions of various drugs were successfully characterized by spray-inlet MPT-MS/MS. The analysis of one sample was finished within 30 s. Furthermore, the method exhibited excellent efficiency, precision and sensitivity, and the limits of detection and limits of quantification of the samples in methanol were in the range of 5.25-60.0 and 17.5-200 ng g-1 , respectively. Excellent linearities with coefficients of determination (R2 ) of 0.9627-0.9980 were verified in the range 0.05-50 µg g-1 . Four different beverages purchased locally were also analyzed with spray-inlet MPT-MS/MS, and caffeine was directly determined in two of the beverages. By adding six standard drug samples to sport drinks (each drug was 1 µg g-1 ) and Chinese spirit (each drug was 0.1 µg g-1 ), all the drugs except for caffeine were detected successfully. CONCLUSIONS: This study indicates that spay-inlet MPT-MS/MS is an effective method for direct and rapid identification of drug solutions, and it has substantial potential for fast and sensitive drug residue detection.

[Effects of low temperature on formation of spikelets and grain filling of indica inbred rice during panicle initiation in early-season].

A pot experiment in phytotron with controlled temperature was conducted to examine the effects of low temperature (LT) on differentiation and retrogression of branches and spikelets and grain filling of rice during panicle initiation (PI). In this study, indica inbred rice called Zhong-jiazaol7 was planted and treated at 17 and 20 °C of LT during primary branches anlage differentiation (II) and pollen mother cell meiosis stage (VI) of PI. The results showed that the numbers of differentiated and survived branches per panicle were significantly reduced under LT treatment compared with control, and the number of survived spikelets was significantly decreased by 7.2% - 12.4%, but the numbers of retrograded branches and spikelets were increased. Moreover, LT affected significantly the development of floral organ such as pollen activity and anther dehiscence, and caused harmful grain filling, particularly at 17 °C. The numbers of total differentiated and survived branches and spikelets were lower during VI (PI) than during II (PI) under LT stress, but more retrograded secondary branches and spikelets (increased by 11.6%) were found during V (PI) compared with II (PI). Meanwhile, in contrast to II (PI), the seed setting rate was significantly lowered by 3.7% during VI (PI), which was attributed to reductions in pollen activity, pollen grains on stigma, anther dehiscence coefficient and grain filling rate. LT stress impact on rice panicles was higher at 17 °C than at 20 °C during II and VI (PI). The cultivation measure could be correspondingly strengthened and improved in practice.