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1.
J Appl Microbiol ; 115(3): 818-27, 2013 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-23773171

RESUMO

AIMS: The goal of this study was to develop a molecular diagnostic multiplex assay for the quantitative detection of microbial pathogens commonly responsible for ventilator-associated pneumonia (VAP) and their antibiotic resistance using linear-after-the-exponential polymerase chain reaction (LATE-PCR). METHOD AND RESULTS: This multiplex assay was designed for the quantitative detection and identification of pathogen genomic DNA of methicillin-resistant Staphylococcus aureus (MRSA), Acinetobacter baumannii, Pseudomonas aeruginosa, plus a control target from Lactococcus lactis. After amplification, the single-stranded amplicons were detected simultaneously in the same closed tube by hybridization to low-temperature molecular beacon probes labelled with four differently coloured fluorophores. The resulting hybrids were then analysed by determining the fluorescence intensity of each of the four fluorophores as a function of temperature. CONCLUSIONS: This LATE-PCR single tube multiplex assay generated endpoint fluorescent contours that allowed identification of all microbial pathogens commonly responsible for VAP, including MRSA. The assay was quantitative, identifying the pathogens present in the sample, no matter whether there were as few as 10 or as many 100 000 target genomes. SIGNIFICANCE AND IMPACT OF THE STUDY: This assay is rapid, reliable and sensitive and is ready for preclinical testing using samples recovered from patients suffering from ventilator-associated pneumonia.


Assuntos
Reação em Cadeia da Polimerase Multiplex/métodos , Pneumonia Associada à Ventilação Mecânica/microbiologia , Acinetobacter baumannii/genética , Acinetobacter baumannii/isolamento & purificação , Humanos , Staphylococcus aureus Resistente à Meticilina/genética , Staphylococcus aureus Resistente à Meticilina/isolamento & purificação , Hibridização de Ácido Nucleico , Pseudomonas aeruginosa/genética , Pseudomonas aeruginosa/isolamento & purificação
2.
J Appl Microbiol ; 114(2): 457-69, 2013 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-23136933

RESUMO

AIMS: The goal of this study was to construct a single-tube multiplex molecular diagnostic assay using linear-after-the-exponential (LATE)-PCR for the detection of 17 microbial pathogens commonly associated with septicaemia. METHODS AND RESULTS: The assay described here detects 17 pathogens associated with sepsis via amplification and analysis of gene-specific sequences. The pathogens and their targeted genes were: Klebsiella spp. (phoE); Acinetobacter baumannii (gyrB); Staphylococcus aureus (spa); Enterobacter spp. (thdF); Pseudomonas aeruginosa (toxA); coagulase-negative staphylococci (tuf), Enterococcus spp. (tuf); Candida spp. (P450). A sequence from an unidentified gene in Lactococcus lactis, served as a positive control for assay function. LATE-PCR was used to generate single-stranded amplicons that were analysed at endpoint over a wide range of temperatures in four fluorescent colours. Each target was detected by its pattern of hybridization to a sequence-specific low-temperature fluorescent probe derived from molecular beacons. CONCLUSIONS: All 17 microbial targets were detected in samples containing low numbers of pathogen genomes in the presence of high levels of human genomic DNA. SIGNIFICANCE AND IMPACT OF THE STUDY: This assay used new technology to achieve an advance in the field of molecular diagnostics: a single-tube assay for detection of pathogens commonly responsible for septicaemia.


Assuntos
Técnicas de Diagnóstico Molecular , Reação em Cadeia da Polimerase Multiplex/métodos , Sepse/diagnóstico , Bactérias/genética , Bactérias/isolamento & purificação , Candida/genética , Candida/isolamento & purificação , DNA Bacteriano/química , DNA Fúngico/química , Genoma Bacteriano , Genoma Fúngico , Humanos , Hibridização de Ácido Nucleico , Sepse/microbiologia
3.
J Appl Microbiol ; 114(2): 586-94, 2013 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-23136961

RESUMO

AIMS: To verify monoplex and multiplex gene-specific linear-after-the-exponential polymerase chain reaction (LATE-PCR) assays for identifying 17 microbial pathogens (i.e., Klebsiella sp., Acinetobacter baumannii, Staphylococcus aureus, Enterobacter sp., Pseudomonas aeruginosa, coagulase negative staphylococci, Enterococcus sp., Candida sp.) commonly associated with septicaemia using clinical isolates. METHODS AND RESULTS: Clinical isolates of each target pathogen were collected from the University of California, Davis Medical Center (UCDMC) microbiology laboratory. Five microlitres (µl) of each culture suspension (1 × 10(8) CFU ml(-1) ) were added to 20 µl of monoplex mastermix. DNA extracted from clinical isolates was tested in multiplex. Monoplex assays demonstrated 100% sensitivity at this input level, except Enterobacter cloacae (2.7%), Ac. baumannii (57%) and Ps. aeruginosa (97.8%). All clinical isolates were positive in multiplex, with the exception of two Ac. baumannii, two Klebsiella oxytoca and two Candida parapsilosis isolates. CONCLUSIONS: Sixteen pathogens can be identified by monoplex LATE-PCR assays with sensitivities ≥ 97.8%. The multiplex assay demonstrated 91.4% sensitivity when tested with DNA extracted from 70 different target strains. SIGNIFICANCE AND IMPACT OF THE STUDY: This study demonstrates the potential of LATE-PCR to serve as an adjunct to culture if the reagents are optimized for sensitivity. Results warrant further testing through analytical and clinical validation of the multiplex assay.


Assuntos
Bactérias/isolamento & purificação , Reação em Cadeia da Polimerase/métodos , Sepse/microbiologia , Acinetobacter baumannii/genética , Acinetobacter baumannii/isolamento & purificação , Candida/genética , Candida/isolamento & purificação , DNA Bacteriano/análise , DNA Bacteriano/isolamento & purificação , DNA Fúngico/análise , DNA Fúngico/isolamento & purificação , Enterobacter/genética , Enterobacter/isolamento & purificação , Enterococcus/genética , Enterococcus/isolamento & purificação , Genes Bacterianos , Genes Fúngicos , Humanos , Klebsiella/genética , Klebsiella/isolamento & purificação , Reação em Cadeia da Polimerase Multiplex/métodos , Pseudomonas aeruginosa/genética , Pseudomonas aeruginosa/isolamento & purificação , Sensibilidade e Especificidade , Staphylococcus/genética , Staphylococcus/isolamento & purificação , Staphylococcus aureus/genética , Staphylococcus aureus/isolamento & purificação
4.
J Virol Methods ; 172(1-2): 8-15, 2011 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-21167207

RESUMO

African swine fever virus (ASFV) is a highly pathogenic DNA virus that is the causative agent of African swine fever (ASF), an infectious disease of domestic and wild pigs of all breeds and ages, causing a range of syndromes. Acute disease is characterized by high fever, haemorrhages in the reticuloendothelial system, and a high mortality rate. A powerful novel diagnostic assay based on the Linear-After-The-Exponential-PCR (LATE-PCR) principle was developed to detect ASFV. LATE-PCR is an advanced form of asymmetric PCR which results in direct amplification of large amount of single-stranded DNA. Fluorescent readings are acquired using endpoint analysis after PCR amplification. Amplification of the correct product is verified by melting curve analysis. The assay was designed to amplify the VP72 gene of ASFV genome. Nineteen ASFV DNA cell culture virus strains and three tissue samples (spleen, tonsil, and liver) from infected experimental pigs were tested. Virus was detected in all of the cell culture and tissue samples. None of five ASFV-related viruses tested produced a positive signal, demonstrating the high specificity of the assay. The sensitivity of the LATE-PCR assay was determined in two separate real-time monoplex reactions using samples of synthetic ASFV and synthetic control-DNA targets that were diluted serially from 109 to 1 initial copies per reaction. The detection limit was 1 and 10 copies/reaction, respectively. The sensitivity of the assay was also tested in a duplex end-point reactions comprised of a constant level of 150 copies of synthetic control-DNA and a clinical sample of spleen tissue diluted serially from 10⁻¹ to 10⁻5. The detection limit was 10⁻5 dilution which corresponds to approximately 1 copy/reaction. Since the assay is designed to be used in either laboratory settings or in a portable PCR machine (Bio-Seeq Portable Veterinary Diagnostics Laboratory; Smiths Detection, Watford UK), the LATE-PCR provides a robust and novel tool for the diagnosis of ASF both in the laboratory and in the field.


Assuntos
Vírus da Febre Suína Africana/fisiologia , Febre Suína Africana/diagnóstico , Criação de Animais Domésticos/métodos , Reação em Cadeia da Polimerase , Vírus da Febre Suína Africana/genética , Animais , DNA de Cadeia Simples , DNA Viral , Sensibilidade e Especificidade , Suínos , Proteínas Virais/genética
5.
J Appl Microbiol ; 109(1): 180-9, 2010 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-20028437

RESUMO

AIMS: A novel molecular assay for the detection of foot-and-mouth disease virus (FMDV) was developed using linear-after-the-exponential polymerase chain reaction (LATE-PCR). METHODS AND RESULTS: Pilot experiments using synthetic DNA targets demonstrated the ability of LATE-PCR to quantify initial target concentration through endpoint detection. A two-step protocol involving reverse transcription (RT) followed by LATE-PCR was then used to confirm the ability of the assay to detect FMDV RNA. Finally, RT and LATE-PCR were combined in a one-step duplex assay for co-amplification of an FMDV RNA segment and an internal control comprised of an Armored RNA. In that form, each of the excess primers in the reaction mixture hybridize to their respective RNA targets during a short pre-incubation, then generate cDNA strands during a 3-min RT step at 60°C, and the resulting cDNA is amplified by LATE-PCR without intervening sample processing. CONCLUSIONS: The RT-LATE-PCR assay generates fluorescent signals at endpoint that are proportional to the starting number of RNA targets and can detect a range of sequence variants using a single mismatch-tolerant probe. SIGNIFICANCE AND IMPACT OF THE STUDY: In addition to offering improvements over current laboratory-based molecular diagnostic assays for FMDV, this new assay is compatible with a novel portable ('point-of-care') device, the BioSeeq II, designed for the rapid diagnosis of FMD in the field.


Assuntos
Vírus da Febre Aftosa/isolamento & purificação , Reação em Cadeia da Polimerase Via Transcriptase Reversa/métodos , Animais , Sequência de Bases , Primers do DNA/genética , Febre Aftosa/diagnóstico , Febre Aftosa/virologia , Vírus da Febre Aftosa/genética , Sondas de Ácido Nucleico/genética , Projetos Piloto , RNA Viral/isolamento & purificação , Sensibilidade e Especificidade
6.
Chromosoma ; 110(4): 267-74, 2001 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-11534818

RESUMO

The nuclei of human neutrophils typically consist of a linear array of three or four lobes joined by DNA-containing filaments. Terminal lobes are connected to internal lobes via a single filament, while internal lobes have two filaments, each to an adjacent lobe. Some lobes also have appendages of various shapes and sizes. In particular, up to 17% of neutrophil nuclei of healthy women exhibit a drumstick-shaped appendage that contains the inactive X chromosome. This report provides a detailed analysis of the relationship between nuclear morphology and the location of the X and Y chromosomes in human neutrophils. Fluorescent in situ hybridization analysis revealed that the X and the Y chromosomes of male neutrophil nuclei are randomly distributed among nuclear lobes. Similarly, in female neutrophil nuclei with a drumstick appendage, the active X chromosome is also randomly distributed among lobes. In contrast, the inactive X chromosome is preferentially located in a terminal lobe in over 90% nuclei with drumsticks. Within the terminal lobe of nuclei with drumsticks, the inactive X chromosome lies distal to the point of filament attachment in 80% of the nuclei. The inactive X chromosome also exhibits a specific orientation within the drumstick appendage, with over 95% of nuclei having the X centromere located toward the tip of the appendage. Female nuclei without a drumstick appendage also have one of the X chromosomes (presumably the inactive chromosome) preferentially situated in a terminal lobe. Nonrandom distribution of the inactive X chromosome is discussed in the context of a model that considers chromosomes as determinants of neutrophil nuclear morphology.


Assuntos
Núcleo Celular/genética , Mecanismo Genético de Compensação de Dose , Neutrófilos/ultraestrutura , Cromossomo X , Núcleo Celular/ultraestrutura , Humanos , Hibridização in Situ Fluorescente , Masculino
7.
Mol Hum Reprod ; 6(12): 1155-64, 2000 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-11101699

RESUMO

We describe a highly accurate method for determining the sex of human embryos via real-time polymerase chain reaction (PCR) amplification of highly-conserved, moderately-repeated sequences within the TSPY genes on the Y chromosome and the U2 genes on chromosome 17. Individual male lymphocytes, female lymphocytes, and blastomeres from donated cleavage-stage embryos were lysed prior to PCR using an optimized buffer containing proteinase K. Molecular beacons, a new type of fluorescent probe, were used to detect and quantify accumulating amplicons during each cycle of PCR carried out in closed tubes. The present work is part of an ongoing study to construct and implement a new, convenient and reliable system of preimplantation genetic diagnosis (PGD).


Assuntos
Blastômeros , Cromossomos Humanos Par 17 , Proteínas Nucleares , Reação em Cadeia da Polimerase/métodos , Fatores de Transcrição , Cromossomo Y , Proteínas de Ciclo Celular , Proteínas de Ligação a DNA/genética , Feminino , Humanos , Linfócitos/metabolismo , Masculino , RNA Nuclear Pequeno/análise , Proteína da Região Y Determinante do Sexo , Fatores de Tempo
8.
Biol Reprod ; 61(4): 912-20, 1999 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-10491624

RESUMO

We have achieved efficient in vitro reactivation and replication of human sperm nuclei in frog egg extracts by constructing a 4-step protocol that mimics the events of fertilization and pronucleus formation in mammalian eggs. With use of this protocol, 78-97% of human sperm nuclei from fertile donors synchronously swelled and completed full genome replication in about 2 h. We document the changes in nuclear structure that accompany efficient DNA synthesis and discuss future research and potential clinical implications of this new system.


Assuntos
Núcleo Celular/fisiologia , Replicação do DNA , Interações Espermatozoide-Óvulo/fisiologia , Espermatozoides/fisiologia , Animais , Feminino , Fertilização in vitro/métodos , Humanos , Masculino , Oócitos/citologia , Oócitos/fisiologia , Espermatozoides/citologia , Xenopus
9.
J Cell Biochem ; 73(1): 1-10, 1999 Apr 01.
Artigo em Inglês | MEDLINE | ID: mdl-10088718

RESUMO

During human neutrophil differentiation, large portions of the genome condense and associate with the nuclear envelope to form filament-like structures. As a result, the nucleus of the mature neutrophil typically consists of a linear array of three or four lobes joined by thin, DNA-containing filaments. Despite the medical significance of neutrophil nuclear morphology, little is known about the events regulating neutrophil nuclear differentiation and its pathological states. This work presents a new model of the mechanisms governing nuclear filament formation in human neutrophils. This model is based on recent chromosome mapping studies in human neutrophils and on studies of genetic and pathological conditions affecting neutrophil nuclear shape. According to this model, filament assembly is initiated by factors that interact with specific regions of the genome in a hierarchical and dose-dependent manner. In this regard, the strategies governing the molecular interactions responsible for filament formation appear to resemble those involved in transcriptional silencing, a phenomenon that also affects the properties of extended chromosomal regions. According to the silencing paradigm, bound filament control Factors must recruit additional Filament Foehn factors which spread along adjacent DNA to mediate filament formation. A better understanding of the factors that shape the neutrophil nucleus may lead to new clinical tools for the diagnosis and manipulation of abnormal neutrophil differentiation.


Assuntos
Núcleo Celular/ultraestrutura , Neutrófilos/ultraestrutura , Doenças Genéticas Inatas/patologia , Humanos , Saccharomyces cerevisiae/genética , Transcrição Gênica
10.
Chromosoma ; 106(3): 168-77, 1997 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-9233990

RESUMO

Human neutrophil nuclei typically consist of three of four large heterochromatic lobes joined by thin, DNA-containing filaments. In addition, some lobes exhibit appendages of various sizes and shapes. Classical genetic and cytological studies suggest that some appendages contain specific chromosomes. The studies reported here provide the first detailed analysis of the spatial relationship between individual chromosomes and recognizable structures in neutrophil nuclei using fluorescent in situ hybridization. Analysis of DNA sequences in chromosomes 2, 18, X, and Y demonstrate that specific lobes in a population of neutrophil nuclei do not have a fixed chromosome content. This result implies that chromosomes partition randomly among lobes during neutrophil differentiation. However, neutrophil nuclear topography is not entirely fortuitous. For instance, none of the sequences probed in this study mapped to a filament and most centromeres lie in clusters near the nuclear periphery. In addition, one of the X chromosome centromeres in females and the Y chromosome centromere in males consistently associate with specific nuclear appendages found in a subset of neutrophil nuclei. Chromosomes 2 and 18 occupy discrete nd separate territories within individual lobes and neither territory ever extends into a filament. Surprisingly, the sizes of these territories are not proportional to chromosome length, suggesting that individual neutrophil chromosomes vary in their degree of compaction. These results are discussed in the light of models that attempt to explain nuclear morphology in terms of chromosome spatial organization.


Assuntos
Núcleo Celular/ultraestrutura , Cromossomos Humanos/ultraestrutura , Neutrófilos/ultraestrutura , Cromossomos Humanos/genética , Cromossomos Humanos Par 18/genética , Cromossomos Humanos Par 18/ultraestrutura , Cromossomos Humanos Par 2/genética , Cromossomos Humanos Par 2/ultraestrutura , Mecanismo Genético de Compensação de Dose , Feminino , Humanos , Hibridização in Situ Fluorescente , Masculino , Cromossomo X/genética , Cromossomo X/ultraestrutura , Cromossomo Y/genética , Cromossomo Y/ultraestrutura
11.
J Biol Chem ; 270(50): 29676-81, 1995 Dec 15.
Artigo em Inglês | MEDLINE | ID: mdl-8530355

RESUMO

Small plasmids replicate efficiently in unfertilized Xenopus eggs provided they are injected before rather than after activation of the cell cycle. Here we use Xenopus egg extracts to test the hypothesis that efficient replication results from chromatin assembly prior to activation giving preloaded plasmids a head start toward the formation of a replicating pseudonucleus (Sanchez, J.A., Marek, D., and Wangh, L.J. (1992) J. Cell Sci. 103, 907-918). As in ovum, plasmid DNA preincubated in unactivated egg cytoplasmcytostatic factor extracts) replicate more efficiently after extract activation than does the same DNA added to the same extract after activation. Unlike in ovum, however, plasmids that replicate efficiently in vitro do not assemble into chromatin during preincubation and become topologically knotted instead. But even DNA knotting does not explain subsequent efficient replication. Also, plasmids preassembled into chromatin in vitro do not replicate efficiently in activated egg cytoplasm unless first preincubated in a CSF extract. We conclude that unactivated eggs contain replication-enhancing activities that can act independently of plasmid chromatin assembly and DNA topology. These postulated "preloading" factor(s) may be related to licensing factor, an activity that controls initiation of DNA replication in eukaryotic cells. The experimental conditions described here will permit characterization of preloading/licensing factor(s) in the context of a small plasmid substrate.


Assuntos
Cromatina/fisiologia , Replicação do DNA , DNA Topoisomerases Tipo II/metabolismo , Oócitos/fisiologia , Plasmídeos/biossíntese , Animais , Feminino , Cinética , Conformação de Ácido Nucleico , Plasmídeos/química , Plasmídeos/isolamento & purificação , Moldes Genéticos , Fatores de Tempo , Extratos de Tecidos , Xenopus
12.
J Cell Sci ; 108 ( Pt 6): 2187-96, 1995 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-7673338

RESUMO

Rapid genome replication is one of the hallmarks of the frog embryonic cell cycle. We report here that complete reactivation of quiescent somatic cell nuclei in Xenopus egg extracts depends on prior restructuring of the nuclear substrate and prior preparation of cytoplasmic extract with the highest capacity to initiate and sustain DNA synthesis. Nuclei from mature erythrocytes swell, replicate their DNA efficiently, and enter mitosis in frozen/thawed extracts prepared from activated Xenopus eggs, provided the nuclei are first treated with trypsin, heparin, and an extract prepared from unactivated, meiotically arrested, eggs. Optimal replicating extracts are prepared from large batches of unfertilized eggs that are synchronously activated into the cell cycle for 28 minutes (at 20 degrees C). Because the Xenopus cell cycle progresses so rapidly, extracts prepared just a few minutes before or after this time have substantially lower DNA synthetic capacities. At the optimal time and temperature, eggs have just reached the G1/S boundary of the first cell cycle. This fact was revealed by injecting and replicating an SV40 plasmid in intact unfertilized eggs as described previously. We estimate that under optimal conditions approximately 6.14 x 10(9) base pairs of DNA/per nucleus are synthesized in 30-40 minutes, a rate that rivals that observed in the zygotic nucleus. The findings reported here are one step in our long term effort to develop a new in vitro/in vivo approach to nuclear transplantation. Nuclear transplantation in amphibian embryos has been used to establish that the genomes of many types of differentiated somatic cells are pluripotent. But very few such nuclei have ever developed into advanced tadpoles or adult frogs, probably because somatic nuclei injected directly into activated eggs fail to reactivate quickly enough to avoid being damaged during first mitosis. We have already shown that unfertilized eggs can be injected prior to activation of the first cell cycle. Future experiments will reveal whether in vitro reactivated somatic cell nuclei transplanted into such eggs reliably reach advanced stages of development.


Assuntos
Eritrócitos/fisiologia , Xenopus/fisiologia , Animais , Ciclo Celular , Núcleo Celular/fisiologia , Replicação do DNA , Expressão Gênica , Técnicas de Transferência Nuclear , Xenopus/embriologia
13.
Brandeis Rev ; 15(2): 23-7, 1995.
Artigo em Inglês | MEDLINE | ID: mdl-12319267

RESUMO

PIP: The author, a Brandeis University biologist who attended the 1994 International Conference on Population and Development, cautions against optimism regarding the global impact of this gathering in the absence of revolutionary changes in four areas: reproductive practices, sexual behavior, human consumption of natural resources, and population crowding. Few speakers at Cairo addressed the ecologic and climatologic consequences of overpopulation and environmental destruction, despite indications that the earth is reaching the limits of its environmental support system. Another concern is the conflict between contraceptive methods that are most effective in preventing pregnancy and the condom use that is essential to halt the spread of acquired immunodeficiency syndrome (AIDS). In countries such as China, where the AIDS epidemic's threat has been minimized by the government, massive educational campaigns will be required to convince sterilized couples that they must now practice safe sex. Also criticized is the assumption that population stabilization is achievable through a balance in birth and death rates. It is likely that environmental instability and other factors will lead to substantially increased mortality in the years ahead. Needed is a new global ethics based on biological realities and valuation of the environment.^ieng


Assuntos
Síndrome da Imunodeficiência Adquirida , Meio Ambiente , Estudos de Avaliação como Assunto , Nações Unidas , Doença , Infecções por HIV , Agências Internacionais , Organizações , Viroses
14.
J Cell Sci ; 103 ( Pt 4): 907-18, 1992 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-1336780

RESUMO

Injection of the circular plasmid FV1 (derived from type I bovine papilloma virus) into Xenopus eggs before the start of the first cell cycle dramatically increases the efficiency of plasmid replication once eggs are chemically activated. We call this the preloading effect and report kinetic and quantitative characterization of this phenomenon here. The timing and the amount of FV1 synthesis were measured by both BrdUTP density labelling and an optimized method of selective enzymatic digestion of replicated and unreplicated molecules using the three methyladenosine-sensitive isoschizomers, DpnI, MboI and Sau3a. DpnI in 100 mM NaCl proved particularly useful for distinguishing and quantitating unreplicated, once-replicated, and repeatedly replicated molecules accumulated over several cell cycles. Our results reveal that both the amount of DNA replicated and the timing of synthesis during the first S-phase correlate with the length of the preloading period. Longer preloading leads to larger amounts of DNA being replicated sooner. In fact, up to 30-50% of 1 ng injected plasmid can replicate in a semiconservative cell cycle-dependent manner during the first S-phase. But such high levels of synthesis during the first cell cycle appear to limit the egg's ability to rereplicate this material in subsequent cell cycles. The preloading effect does not depend on synthesis of either viral or egg proteins, but does appear to correlate with the extent of plasmid assembly into chromatin before the start of the cell cycle. We postulate that each plasmid molecule must achieve a critical degree of chromatin assembly before it can proceed along the replication pathway. These observations illuminate some of the difficulties inherent in building a vector for gene insertion into Xenopus embryos, but also suggest an experimental strategy toward this aim.


Assuntos
Cromatina/metabolismo , Replicação do DNA , Vetores Genéticos , Oócitos/metabolismo , Plasmídeos , Animais , Papillomavirus Bovino 1/genética , Centrifugação com Gradiente de Concentração , Cromatina/ultraestrutura , Enzimas de Restrição do DNA/metabolismo , DNA Circular/metabolismo , DNA Viral/biossíntese , Proteínas do Ovo/biossíntese , Eletroforese em Gel de Ágar , Eletroforese em Gel Bidimensional , Feminino , Microinjeções , Oócitos/ultraestrutura , Fase S , Fatores de Tempo , Proteínas Virais/biossíntese , Xenopus laevis
15.
J Cell Sci ; 93 ( Pt 1): 1-8, 1989 May.
Artigo em Inglês | MEDLINE | ID: mdl-2559091

RESUMO

Injection of molecular probes into unfertilized Xenopus eggs requires suppression of activation. But the unfertilized egg is poised for activity, and pricking, like sperm penetration, triggers the start of the first cell cycle. Methods of suppressing activation generally rely on introduction of drugs into the cell, but some of these techniques are irreversible. I report here that injection without activation can also be accomplished by simply limiting extracellular free Ca2+ to 1-2 microM. The site of injection heals, but the cortex does not contract. Gentle modification of the vitelline envelope, which causes it to become tougher, improves the rate of healing to about 100%. Healed eggs are stable for hours and can be activated when needed. Injection of a plasmid derived from type 1 bovine papilloma virus revealed that replication occurs only after activation, but preloading the DNA markedly increased the efficiency of first-round replication. DNA interaction with the unactivated egg cytoplasm may therefore be required for efficient replication of exogenous DNA. The new procedures described here are likely to be of general utility.


Assuntos
Papillomavirus Bovino 1/genética , Replicação do DNA , Oócitos/fisiologia , Papillomaviridae/genética , Plasmídeos , Supressão Genética , Animais , Southern Blotting , Calcimicina/farmacologia , Cálcio/farmacologia , Transformação Celular Neoplásica , Feminino , Cinética , Microinjeções , Oócitos/efeitos dos fármacos , Membrana Vitelina/efeitos dos fármacos , Membrana Vitelina/fisiologia
16.
Dev Biol ; 131(1): 102-10, 1989 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-2909398

RESUMO

Reactivation and reinitiation of DNA replication in quiescent frog erythrocyte nuclei has been analyzed following incubation in extracts prepared from activated Xenopus eggs. Nuclear decondensation and DNA synthesis only occurred if nuclei were pretreated with low doses of trypsin. This protease treatment did not digest histones, but did degrade several nonhistone proteins. Activated erythrocyte nuclei swell and begin DNA synthesis by 30 min after being mixed with the egg extract. In some extracts virtually complete genome replication was achieved in all nuclei after 2-3 hr. Addition of several protease inhibitors during sperm nuclear isolation significantly reduced the template efficiency of these preparations. We concluded that proteolytic alteration of nonhistone nuclear structural proteins may be a general mechanism which permits quiescent nuclei to reenter the replication cycle. Erythrocyte nuclei and egg extracts provide an excellent experimental system in which to investigate the processes of nuclear reactivation.


Assuntos
Núcleo Celular/metabolismo , Replicação do DNA , Eritrócitos/ultraestrutura , Óvulo/fisiologia , Tripsina/farmacologia , Animais , Núcleo Celular/efeitos dos fármacos , Replicação do DNA/efeitos dos fármacos , Nucleotídeos de Desoxiuracil/farmacologia , Histonas/metabolismo , Cinética , Masculino , Proteínas Nucleares/metabolismo , Inibidores de Proteases/farmacologia , Espermatozoides/ultraestrutura , Extratos de Tecidos , Xenopus laevis
17.
Biochim Biophys Acta ; 949(3): 325-33, 1988 Mar 31.
Artigo em Inglês | MEDLINE | ID: mdl-2831989

RESUMO

There is growing interest in mapping and analyzing complete eukaryotic genomes. Yee and Inouye (in Experimental Manipulation of Gene Expression, pp. 279-290, Academic Press, New York) demonstrated that bacterial chromosomes can be resolved into interpretable patterns of DNA fragments by means of restriction enzyme digestion and electrophoresis in two dimensions. We have begun to explore applications of this procedure to analysis of eukaryotic genomes, which are far more complex. Tetrahymena thermophila was selected as a model organism because its genome is small, roughly equivalent to that of a single human chromosome. In addition, each Tetrahymena cell contains two nuclei which differ in sequence composition and methylation. Our results demonstrate that the Tetrahymena genome can be resolved into complex patterns of fragments in two dimensions. Hybridization to Southern blots of these gels with a multiply repeated sequence probe yielded analyzable patterns of a subset of the genome. The blots reveal alterations in genome structure due to methylation and rearrangement. Future extensions of the method are discussed.


Assuntos
Enzimas de Restrição do DNA/metabolismo , DNA/análise , Eletroforese em Gel de Poliacrilamida/métodos , Sequências Repetitivas de Ácido Nucleico , Tetrahymena/genética , Animais , Amplificação de Genes , Metilação
18.
Dev Biol ; 121(2): 301-5, 1987 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-3582729

RESUMO

We have previously demonstrated that injection of adult male frogs with estradiol-17 beta causes extensive proliferation of liver parenchymal cells together with the induction of vitellogenin (R. J. Spolski, W. Schneider, and L. J. Wangh (1985) Dev. Biol. 108, 332-340). In addition, purified parenchymal cells placed in culture synthesize DNA in an estrogen-dependent manner (B. S. Aprison, L. Martin-Morris, R. J. Spolski, and L. J. Wangh (1986) In Vitro 22, 457-464). We now describe conditions under which secondary exposure to estradiol-17 beta, either in vivo or in vitro, can lead to further DNA synthesis and cell division. The extent of this proliferation depends upon both the magnitude of the primary dose and the length of time elapse before secondary stimulation. A hormone dose of 0.5 mg, which causes little cell proliferation initially, allows for maximal secondary proliferation in response to 2.0 mg, while a maximal primary dose of 2.0 mg substantially inhibits further division in response to a secondary treatment with the same hormone dose. Cell culture experiments demonstrate that the failure of liver cells, in maximally stimulated males, to synthesize DNA in response to estrogen is not irreversible. But, cell crowding in culture does restrict DNA synthesis. The restrictions seen in vivo may therefore be due to structural features of the intact tissue rather than to terminal differentiation at the genetic level. These results are discussed with regard to our understanding of hormone-dependent differentiation in the frog liver system.


Assuntos
Estradiol/farmacologia , Fígado/citologia , Animais , Contagem de Células , Diferenciação Celular , Divisão Celular/efeitos dos fármacos , Células Cultivadas , DNA/biossíntese , Relação Dose-Resposta a Droga , Estradiol/administração & dosagem , Fígado/efeitos dos fármacos , Fígado/metabolismo , Masculino , Xenopus
19.
Mol Cell Endocrinol ; 49(1): 63-73, 1987 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-3556750

RESUMO

In the frog Xenopus laevis, vitellogenin is the major estrogen-induced protein in the liver. We have characterized an additional secreted protein, of 45,000 Da and designated Ep45, which is also responsive to estrogen treatment. Like vitellogenin, Ep45 is not normally found in the plasma nor synthesized by the liver of the male frog. Its synthesis increases 6-fold between days 2 and 8 following a single 2 mg injection of estradiol-17 beta. For comparison, we have also studied a third estrogen-regulated protein, Ep20, with a molecular weight of approximately 20,000. This protein exhibits a different set of characteristics with regard to hormone responsiveness. Ep20 is synthesized in the liver of normal males and therefore is not absolutely hormone-dependent. Its level increases only about 4-fold following estrogen stimulation. The messenger RNAs for both Ep45 and Ep20 have been identified and purified, using a high-resolution RNA fractionation technique. By this procedure, it was possible to demonstrate that following high doses of estrogen the predominant mRNAs in the liver are those coding for vitellogenin, Ep45 and Ep20. Thus estrogen suppression of virtually all other liver proteins appears to act at the messenger RNA level for intracellular as well as secreted proteins.


Assuntos
Estradiol/farmacologia , Fígado/metabolismo , Biossíntese de Proteínas , Vitelogeninas/biossíntese , Animais , Proteínas Sanguíneas/biossíntese , Fígado/efeitos dos fármacos , Masculino , Peso Molecular , Precursores de Proteínas/metabolismo , Proteínas/genética , RNA Mensageiro/isolamento & purificação , RNA Mensageiro/metabolismo , Vitelogeninas/genética , Xenopus laevis
20.
In Vitro Cell Dev Biol ; 22(8): 457-64, 1986 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-3733641

RESUMO

We have recently shown that extensive proliferation of liver parenchymal cells takes place in adult male Xenopus frogs in response to estradiol-17 beta, which also induces synthesis and secretion of vitellogenin, the precursor of yolk proteins. We demonstrate here that liver parenchymal cells from adult male animals can be maintained for several weeks in a defined tissue culture medium containing added insulin, dexamethasone, and triiodothyronine. Under these conditions the cells do not divide, but can synthesize DNA. Maximum DNA synthesis occurs in cells that have achieved monolayer morphology under low plating densities. Estradiol-17 beta causes a dose-dependent increase in the number of cells synthesizing DNA, as well as inducing synthesis of vitellogenin. Estrogen-dependent, but not background, DNA synthesis is inhibited by the antiestrogen tamoxifen. These results imply that estradiol-17 beta acts directly on liver cells to initiate DNA replication, probably by interaction with a receptor protein and induction of specific gene transcription.


Assuntos
DNA/biossíntese , Estradiol/farmacologia , Fígado/citologia , Animais , Células Cultivadas , Relação Dose-Resposta a Droga , Fígado/efeitos dos fármacos , Fígado/metabolismo , Masculino , Tamoxifeno/farmacologia , Vitelogeninas/metabolismo , Xenopus laevis
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