Core Collections: Is There Any Value for Cotton Breeding?

Global plant breeding activities are reliant on the available genetic variation held in extant varieties and germplasm collections. Throughout the mid- to late 1900s, germplasm collecting efforts were prioritized for breeding programs to archive precious material before it disappeared and led to the development of the numerous large germplasm resources now available in different countries. In recent decades, however, the maintenance and particularly the expansion of these germplasm resources have come under threat, and there has been a significant decline in investment in further collecting expeditions, an increase in global biosecurity restrictions, and restrictions placed on the open exchange of some commercial germplasm between breeders. The large size of most genebank collections, as well as constraints surrounding the availability and reliability of accurate germplasm passport data and physical or genetic characterization of the accessions in collections, limits germplasm utilization by plant breeders. To overcome these constraints, core collections, defined as a representative subset of the total germplasm collection, have gained popularity. Core collections aim to increase germplasm utilization by containing highly characterized germplasm that attempts to capture the majority of the variation in a whole collection. With the recent availability of many new genetic tools, the potential to unlock the value of these resources can now be realized. The Commonwealth Scientific and Industrial Research Organisation (CSIRO) cotton breeding program supplies 100% of the cotton cultivars grown in Australia. The program is reliant on the use of plant genetic resources for the development of improved cotton varieties to address emerging challenges in pest and disease resistance as well as the global changes occurring in the climate. Currently, the CSIRO germplasm collection is actively maintained but underutilized by plant breeders. This review presents an overview of the Australian cotton germplasm resources and discusses the appropriateness of a core collection for cotton breeding programs.

Salinity-affected threshold yield loss: A signal of adaptation tipping points for salinity management of dry season rice cultivation in the coastal areas of Bangladesh.

The potential existence of threshold yield loss in dry season rice growing systems under coastal saline environment remains unexplored, a scenario that could have policy relevance in government planning of rice intensification in the coastal areas of Bangladesh. This study applied the adaptation tipping points (ATPs) approach to investigate threshold yield loss from multiple perspectives of farmers affected by salinity. Data were generated from 280 randomly-selected farmers (rice farmers, n = 109; shrimp farmers, n = 107; salt farmers, n = 64) from two coastal sub-districts using a semi-structured survey. Key informant interviews and focus group discussions were conducted to complement the survey results. Our study revealed that despite government actions to promote dry season rice cultivation, farmers have been growing less rice in this season, with salinity-affected yield loss being the prime reason. Most of the rice farmers have considered that they would discontinue rice cultivation in this season due to yield loss, while shrimp and salt farmers have already reduced rice cultivation for the same reason and shifted to shrimp and salt farming as they perceived these enterprises as highly profitable and require less labour than rice farming. Rice farmers would tolerate a greater rice yield loss (23%) under saline conditions compared with the shrimp (16%) and salt farmers (14%). The yield loss thresholds indicate the need for government actions to support and encourage integrated land management for rice, shrimp and salt farming, rather than research and extension efforts for dry season rice expansion alone. These actions could strengthen sustainable livelihood options to ensure food security, and contribute to the achievement of sustainable development goals, for instance no poverty (SDG-1), zero hunger (SDG-2), and good health and well-being (SDG-3).

The importance of farmers' perceptions of salinity and adaptation strategies for ensuring food security: Evidence from the coastal rice growing areas of Bangladesh.

Coastal salinity causes substantial adverse impacts on agricultural productivity and food security. Farmers' choice of salinity adaptation strategies might depend on how they perceive the problem. This research examined rice farmers' perceptions of salinity, adaptation strategies, and its implications for policy initiatives to sustain rice production in the affected coastal areas of Bangladesh. Boro rice growers (n = 109) randomly selected from two coastal sub-districts were interviewed using a semi-structured survey. Awareness of salinity and its increase over the past 20 years was widespread among rice farmers. A high proportion of farmers (90%) perceived the reproductive (e.g. booting, heading, and flowering) stages of the rice plant as the most sensitive to salinity problems. Salinity (ECe) was measured in the farmers' fields and were categorized according to farmers' perceptions and scientific interpretation (e.g. high or low). Farmers perceived a field affected by high salinity at a lower EC reading than the scientific interpretation of the salinity level. Most of the farmers (67%) were undertaking early transplanting and applying irrigation in order to adapt to salinity problems which occur later in rice crop growth during Boro season. Thus, farmers' actions demonstrated that their perceptions of salinity and adaptation responses were pre-emptive of when salinity was most likely to have an impact on the rice crop. Farmers' perceptions of salinization and measures to manage salinity need to be considered in research prioritization and policy formulation by the government. This action could potentially secure rice production and thus contribute to the achievement of Sustainable Development Goals (SDG-1, 2 and 3).

Climate trends in the wood anatomy of Acacia sensu stricto (Leguminosae: Mimosoideae).

Background and Aims: This study investigates the structural diversity of the secondary xylem of 54 species of Acacia from four taxonomic sections collected across five climate regions along a 1200 km E-W transect from sub-tropical [approx. 1400 mm mean annual precipitation (MAP)] to arid (approx. 240 mm MAP) in New South Wales, Australia. Acacia sensu stricto ( s.s. ) is a critical group for understanding the effect of climate and phylogeny on the functional anatomy of wood. Methods: Wood samples were sectioned in transverse, tangential and radial planes for light microscopy and analysis. Key Results: The wood usually has thick-walled vessels and fibres, paratracheal parenchyma and uniseriate and biseriate rays, occasionally up to four cells wide. The greater abundance of gelatinous fibres in arid and semi-arid species may have ecological significance. Prismatic crystals in chambered fibres and axial parenchyma increased in abundance in semi-arid and arid species. Whereas vessel diameter showed only a small decrease from the sub-tropical to the arid region, there was a significant 2-fold increase in vessel frequency and a consequent 3-fold decrease in the vulnerability index. Conclusions: Although the underlying phylogeny determines the qualitative wood structure, climate has a significant influence on the functional wood anatomy of Acacia s.s. , which is an ideal genus to study the effect of these factors.

Does aridity influence the morphology, distribution and accumulation of calcium oxalate crystals in Acacia (Leguminosae: Mimosoideae)?

Calcium oxalate (CaOx) crystals are a common natural feature of many plant families, including the Leguminosae. The functional role of crystals and the mechanisms that underlie their deposition remain largely unresolved. In several species, the seasonal deposition of crystals has been observed. To gain insight into the effects of rainfall on crystal formation, the morphology, distribution and accumulation of calcium oxalate crystals in phyllodes of the leguminous Acacia sect. Juliflorae (Benth.) C. Moore & Betche from four climate zones along an aridity gradient, was investigated. The shapes of crystals, which include rare Rosanoffian morphologies, were constant between species from different climate zones, implying that morphology was not affected by rainfall. The distribution and accumulation of CaOx crystals, however, did appear to be climate-related. Distribution was primarily governed by vein density, an architectural trait which has evolved in higher plants in response to increasing aridity. Furthermore, crystals were more abundant in acacias from low rainfall areas, and in phyllodes containing high concentrations of calcium, suggesting that both aridity and soil calcium levels play important roles in the precipitation of CaOx. As crystal formation appears to be calcium-induced, we propose that CaOx crystals in Acacia most likely function in bulk calcium regulation.