Crystal engineering in the gem-alkynol family; synthon repetitivity and topological similarity in diphenylethynylmethanols: structures that lack O-H.O hydrogen bonds

The structures of four para-substituted derivatives of diphenylethynylmethanol have been determined [ditolylethynylmethanol, di(4-chlorophenyl)ethynylmethanol, di(4-bromophenyl)ethynylmethanol and bis(4,4'-biphenylyl)ethynylmethanol]. The dimethyl, dichloro, dibromo and diphenyl compounds have been analysed using X-ray diffraction at 150 K, and the dichloro compound has also been studied using neutron diffraction at 150 K. In common with the parent diphenylethynylmethanol [Garcia, Ramos, Rodriguez & Fronczek (1995). Acta Cryst. C51, 2674-2676], all four derivatives fail to form the expected strong O-H.O hydrogen bonds due to steric hindrance. Instead, the supramolecular structural organization in this family of gem-alkynols is mediated by a variety of weaker interactions. The two most acidic protons, O-H and C[triple-bond]C-H, participate in weak hydrogen bonds to pi-acceptors, forming synthons that stabilize all five structures. These primary interactions are reinforced by a variety of other weak hydrogen bonds involving C-H donors and the hydroxy-O as an acceptor, and by halogen.halogen interactions in the dichloro and dibromo compounds.

Halogen trimer synthons in crystal engineering: low-temperature X-ray and neutron diffraction study of the 1:1 complex of 2,4, 6-tris(4-chlorophenoxy)-1,3,5-triazine with tribromobenzene

The title complex has been studied using low-temperature X-ray (150 K) and neutron (100 K) diffraction. Molecules of the triazine host form a two-dimensional hexagonal network mediated by trigonally symmetric Cl(3) synthons having Cl.Cl interactions of 3.441 (3) A, a C-Cl.Cl angle of 165 degrees and a Cl.Cl-C angle of 105 degrees, close to the ideal values of 180 and 90 degrees, respectively. The guest molecules are of an appropriate size to fit the hexagonal networks and interact with the host via C-H.pi (phenyl) and C-Br.pi (phenyl) interactions which stabilize the overall structure. Both C-donor bond vectors are directed more closely towards the mid-point (X) of an individual aromatic bond, rather than the ring centroid, with H.X 2.817 (9) A and C-H.X 174.0 (9) degrees, and Br.X 3.353 (4) A and C-Br.X 158.1 (2) degrees.

Quantitative analysis of hydrogen bonding and atomic thermal motion in the organic non-linear optical material DCNP using X-ray and neutron diffraction

A single-crystal neutron diffraction study of the organic non-linear optical material 3-(1,1-dicyanoethenyl)-1-phenyl-4, 5-dihydro-1H-pyrazole (hereafter DCNP), space group Cc, is presented. The study was conducted in order to relate the structural characteristics of the compound to its physical properties. DCNP exhibits a very large second harmonic generation (SHG) output, an extremely large linear electro-optical effect and photoconductive and pyroelectric properties. The nature of the hydrogen-bonding revealed by the study, in part, accounts for the first two of these phenomena. The neutron study also shows that some rather atypical atomic thermal motion is present in part of the molecule. With the aid of a variable-temperature single-crystal X-ray diffraction study, in conjunction with the neutron study, this thermal motion is attributed to libration and is fully characterized. As a result, suitable corrections to the bond geometry and the anisotropic displacement parameters of DCNP are made. The libration is also shown to enhance the SHG effect. The cell parameters from the variable-temperature X-ray study are also used in order to evaluate the thermal expansivity coefficients of DCNP.

Experimental evidence for the amino-group non-planarity in nitroanilines: neutron diffraction study of 2-methyl-5-nitroaniline at 100 K.

An appreciable degree of pyramidalization of the amine N atom is observed in the title compound. The existence of polar chains, induced by N-H.O synthons, is confirmed. C-H.O interactions, not noted in a previous X-ray study, were found to stabilize further the known head-to-tail assembling of the chains. The structure can be described as non-polar (101) layers, embodying chains interlinked by centrosymmetric dimers, connected by C(aryl)-H.pi interactions. The latter are not present in m-nitroaniline, 2-methyl-4-nitroaniline and other related compounds with chains built from similar N-H.O synthons and assembled head-to-head. This finding implies that an obvious relationship between molecular recognition patterns and crystal structures should not be assumed.