Introduction: sketches of a conceptual history of epigenesis.

This is an introduction to a collection of articles on the conceptual history of epigenesis, from Aristotle to Harvey, Cavendish, Kant and Erasmus Darwin, moving into nineteenth-century biology with Wolff, Blumenbach and His, and onto the twentieth century and current issues, with Waddington and epigenetics. The purpose of the topical collection is to emphasize how epigenesis marks the point of intersection of a theory of biological development and a (philosophical) theory of active matter. We also wish to show that the concept of epigenesis existed prior to biological theorization and that it continues to permeate thinking about development in recent biological debates.

The organism as reality or as fiction: Buffon and beyond.

In this paper, we reflect on the connection between the notions of organism and organisation, with a specific interest in how this bears upon the issue of the reality of the organism (or in contrast the status of these notions as constructs, whether heuristic or otherwise scientifically useful). We do this by presenting the case of Buffon, who developed complex views about the relation between the notions of "organised" and "organic" matter. We argue that, contrary to what some interpreters have suggested, these notions are not orthogonal in his thought. Also, we argue that Buffon has a view in which organisation is not just ubiquitous, but basic and fundamental in nature, and hence also fully natural. We suggest that he can hold this view because of his anti-mathematicism. Buffon's case is interesting, in our view, because he can regard organisation, and organisms, as perfectly natural, and can admit their reality without invoking problematic supernaturalist views, and because he allows organisation and the organismal to come in kinds and degrees. Thus, his view tries to do justice to two cautionary notes for the debate on the reality of the organism: the need for a commitment to a broadly naturalist perspective, and the need to acknowledge the interesting features of organisms through which we make sense of them.

The organism as ontological go-between: hybridity, boundaries and degrees of reality in its conceptual history.

The organism is neither a discovery like the circulation of the blood or the glycogenic function of the liver, nor a particular biological theory like epigenesis or preformationism. It is rather a concept which plays a series of roles--sometimes overt, sometimes masked--throughout the history of biology, and frequently in very normative ways, also shifting between the biological and the social. Indeed, it has often been presented as a key-concept in life science and the 'theorization' of Life, but conversely has also been the target of influential rejections: as just an instrument of transmission for the selfish gene, but also, historiographically, as part of an outdated 'vitalism'. Indeed, the organism, perhaps because it is experientially closer to the 'body' than to the 'molecule', is often the object of quasi-affective theoretical investments presenting it as essential, sometimes even as the pivot of a science or a particular approach to nature, while other approaches reject or attack it with equal force, assimilating it to a mysterious 'vitalist' ontology of extra-causal forces, or other pseudo-scientific doctrines. This paper does not seek to adjudicate between these debates, either in terms of scientific validity or historical coherence; nor does it return to the well-studied issue of the organism-mechanism tension in biology. Recent scholarship has begun to focus on the emergence and transformation of the concept of organism, but has not emphasized so much the way in which organism is a shifting, 'go-between' concept-invoked as 'natural' by some thinkers to justify their metaphysics, but then presented as value-laden by others, over and against the natural world. The organism as go-between concept is also a hybrid, a boundary concept or an epistemic limit case, all of which partly overlap with the idea of 'nomadic concepts'. Thereby the concept of organism continues to function in different contexts--as a heuristic, an explanatory challenge, a model of order, of regulation, etc.--despite having frequently been pronounced irrelevant and reduced to molecules or genes. Yet this perpetuation is far removed from any 'metaphysics of organism', or organismic biology.

Teleomechanism redux? Functional physiology and hybrid models of life in early modern natural philosophy.

The distinction between 'mechanical' and 'teleological' has been familiar since Kant; between a fully mechanistic, quantitative science of Nature and a teleological, qualitative approach to living beings, namely 'organisms' understood as purposive or at least functional entities. The beauty of this distinction is that it apparently makes intuitive sense and maps onto historico-conceptual constellations in the life sciences, regarding the status of the body versus that of the machine. I argue that the mechanism-teleology distinction is imprecise and flawed using examples including the 'functional' features present even in Cartesian physiology, the Oxford Physiologists' work on circulation and respiration, the fact that the model of the 'body-machine' is not a mechanistic reduction of organismic properties to basic physical properties but is focused on the uniqueness of organic life; and the concept of 'animal economy' in vitalist medicine, which I present as a 'teleomechanistic' concept of organism (borrowing a term of Lenoir's which he applied to nineteenth-century embryology)--neither mechanical nor teleological.

Vitalism and the resistance to experimentation on life in the eighteenth century.

There is a familiar opposition between a 'Scientific Revolution' ethos and practice of experimentation, including experimentation on life, and a 'vitalist' reaction to this outlook. The former is often allied with different forms of mechanism - if all of Nature obeys mechanical laws, including living bodies, 'iatromechanism' should encounter no obstructions in investigating the particularities of animal-machines - or with more chimiatric theories of life and matter, as in the 'Oxford Physiologists'. The latter reaction also comes in different, perhaps irreducibly heterogeneous forms, ranging from metaphysical and ethical objections to the destruction of life, as in Margaret Cavendish, to more epistemological objections against the usage of instruments, the 'anatomical' outlook and experimentation, e.g. in Locke and Sydenham. But I will mainly focus on a third anti-interventionist argument, which I call 'vitalist' since it is often articulated in the writings of the so-called Montpellier Vitalists, including their medical articles for the Encyclopédie. The vitalist argument against experimentation on life is subtly different from the metaphysical, ethical and epistemological arguments, although at times it may borrow from any of them. It expresses a Hippocratic sensibility - understood as an artifact of early modernity, not as some atemporal trait of medical thought - in which Life resists the experimenter, or conversely, for the experimenter to grasp something about Life, it will have to be without torturing or radically intervening in it. I suggest that this view does not have to imply that Nature is something mysterious or sacred; nor does the vitalist have to attack experimentation on life in the name of some 'vital force' - which makes it less surprising to find a vivisectionist like Claude Bernard sounding so close to the vitalists.

Chance between holism and reductionism: tensions in the conceptualisation of Life.

In debates between holism and reductionism in biology, from the early twentieth century to more recent re-enactments involving genetic reductionism, developmental systems theory or systems biology, the role of chance - the presence of theories invoking chance as a strong explanatory principle - is hardly ever acknowledged. Conversely, Darwinian models of chance and selection (Dennett, 1995; Kupiec, 1996, 2009) sit awkwardly with reductionist and holistic concepts, which they alternately challenge or approve of. I suggest that the juxtaposition of chance and the holism-reductionism pair (at multiple levels, ontological and methodological, pertaining to the vision of scientific practice as well as to the foundations of a vision of Nature, implicit or explicit) allows the theorist to shed some new light on these perennial tensions in the conceptualisation of Life.

Do organisms have an ontological status?

The category "organism" has an ambiguous status: is it scientific or is it philosophical? Or, if one looks at it from within the relatively recent field or sub-field of philosophy of biology, is it a central, or at least legitimate category therein, or should it be dispensed with? In any case, it has long served as a kind of scientific bolstering for a philosophical train of argument which seeks to refute the mechanistic or reductionist trend, which has been perceived as dominant since the 17th century, whether in the case of Stahlian animism, Leibnizian monadology, the neo-vitalism of Hans Driesch, or, lastly, of the "phenomenology of organic life" in the 20th century, with authors such as Kurt Goldstein, Maurice Merleau-Ponty, and Georges Canguilhem. In this paper I try to reconstruct some of the main interpretive stages or layers of the concept of organism in order to evaluate it critically. How might organism be a useful concept if one rules out the excesses of organismic biology and metaphysics? Varieties of instrumentalism and what I call the projective concept of organism are appealing, but perhaps ultimately unsatisfying.

The animal economy as object and program in Montpellier vitalism.

Our aim in this paper is to show the importance of the notion of éonomie animale in Montpellier vitalism as a hybrid concept which brings together the structural and functional dimensions of the living body--dimensions which hitherto had primarily been studied according to a mechanistic model, or were discussed within the framework of Stahlian animism. The celebrated image of the bee-swarm expresses this structural-functional understanding of living bodies quite well: "One sees them press against each other, mutually supporting each other, forming a kind of whole, in which each living part, in its own way, by means of the correspondence and directions of its motions, enables this kind of life to be sustained in the body" (Ménuret 1765c, Enc. XI, 319a). What is important here is that every component part is always a living part, i.e., every structural unit is always functional. Interestingly, while the twin notions of "animal economy" and organisation are presented as improvements over a mechanistic perspective, they are nonetheless compatible with an expanded sense of mechanism, and by extension, with materialism as reflected notably in the writings of Ménuret and Bordeu. We thus propose both a revision and reconstruction of the historical status of the "animal economy," and a reflection on its conceptual status.