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1.
Phys Rev E ; 98(1-1): 013110, 2018 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-30110777

RESUMO

Steady thermocapillary droplet migration in a uniform temperature gradient combined with a radiation energy source at large Reynolds and Marangoni numbers is studied. To reach a terminal quasisteady process, the magnitude of the radiation energy source is required to preserve the conservative integral thermal flux across the surface. Under a quasisteady state assumption, an analytical result for the steady thermocapillary migration of a droplet at large Reynolds and Marangoni numbers is derived by using the method of matched asymptotic expansions. It is shown that the thermocapillary droplet migration speed increases as the Marangoni number increases, while a radiation energy source with a sine square dependence is provided.

2.
Comput Biol Chem ; 53 Pt A: 49-58, 2014 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-25199594

RESUMO

Transfer of nucleotide strings in the Synechocystis sp. PCC6803 genome is investigated to exhibit periodic and non-periodic correlation structures by using the recurrence plot method and the phase space reconstruction technique. The periodic correlation structures are generated by periodic transfer of several substrings in long periodic or non-periodic nucleotide strings embedded in the coding regions of genes. The non-periodic correlation structures are generated by non-periodic transfer of several substrings covering or overlapping with the coding regions of genes. In the periodic and non-periodic transfer, some gaps divide the long nucleotide strings into the substrings and prevent their global transfer. Most of the gaps are either the replacement of one base or the insertion/reduction of one base. In the reconstructed phase space, the points generated from two or three steps for the continuous iterative transfer via the second maximal distance can be fitted by two lines. It partly reveals an intrinsic dynamics in the transfer of nucleotide strings. Due to the comparison of the relative positions and lengths, the substrings concerned with the non-periodic correlation structures are almost identical to the mobile elements annotated in the genome. The mobile elements are thus endowed with the basic results on the correlation structures.


Assuntos
DNA Bacteriano/genética , Genoma Bacteriano , Sequências Repetitivas Dispersas , Análise de Sequência de DNA/estatística & dados numéricos , Synechocystis/genética , Sequência de Bases , Dados de Sequência Molecular , Fases de Leitura Aberta , Periodicidade
3.
Chaos ; 20(1): 013122, 2010 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-20370277

RESUMO

The JTZ model [C. Jung, T. Tel, and E. Ziemniak, Chaos 3, 555 (1993)], as a theoretical model of a plane wake behind a circular cylinder in a narrow channel at a moderate Reynolds number, has previously been employed to analyze phenomena of chaotic scattering. It is extended here to describe an open plane wake without the confined narrow channel by incorporating a double row of shedding vortices into the intermediate and far wake. The extended JTZ model is found in qualitative agreement with both direct numerical simulations and experimental results in describing streamlines and vorticity contours. To further validate its applications to particle transport processes, the interaction between small spherical particles and vortices in an extended JTZ model flow is studied. It is shown that the particle size has significant influences on the features of particle trajectories, which have two characteristic patterns: one is rotating around the vortex centers and the other accumulating in the exterior of vortices. Numerical results based on the extended JTZ model are found in qualitative agreement with experimental ones in the normal range of particle sizes.


Assuntos
Biofísica/métodos , Algoritmos , Simulação por Computador , Modelos Teóricos , Dinâmica não Linear , Distribuição Normal , Tamanho da Partícula , Fatores de Tempo
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