Evaluation of fluorescent compound interference in 4 fluorescence polarization assays: 2 kinases, 1 protease, and 1 phosphatase.

With the increasing use of fluorescence-based assays in high-throughput screening (HTS), the possibility of interference by fluorescent compounds needs to be considered. To investigate compound interference, a well-defined sample set of biologically active compounds, LOPAC, was evaluated using 4 fluorescein-based fluorescence polarization (FP) assays. Two kinase assays, a protease assay, and a phosphatase assay were studied. Fluorescent compound interference and light scattering were observed in both mixture- and single-compound testing under certain circumstances. In the kinase assays, which used low levels (1-3 nM) of fluorophore, an increase in total fluorescence, an abnormal decrease in mP readings, and negative inhibition values were attributed to compound fluorescence. Light scattering was observed by an increase in total fluorescence and minimal reduction in mP, leading to false positives. The protease and phosphatase assays, which used a higher concentration of fluorophore (20-1200 nM) than the kinase assays, showed minimal interference from fluorescent compounds, demonstrating that an increase in the concentration of the fluorophore minimized potential fluorescent compound interference. The data also suggests that mixtures containing fluorescent compounds can result in either false negatives that can mask a potential "hit" or false positives, depending on the assay format. Cy dyes (e.g., Cy3B and Cy5 ) excite and emit further into the red region than fluorescein and, when used in place of fluorescein in kinase 1, eliminate fluorescence interference and light scattering by LOPAC compounds. This work demonstrates that fluorescent compound and light scattering interferences can be overcome by increasing the fluorophore concentration in an assay or by using longer wavelength dyes.

Synthesis, Characterization, and Reactivity of Urea Derivatives Coordinated to Cobalt(III). Possible Relevance to Urease.

The syntheses of a cobalt(III) complex, 2, containing N-(2-pyridylmethyl)urea and of six complexes, 3, containing phenyl-substituted N-2-pyridylmethyl-N'-(X)phenylureas (where X = 4-H, 4-CH(3), 4-Br, 3-Cl, 4-CF(3), and 4-NO(2)), have been accomplished by reaction of [(en)(2)Co(OSO(2)CF(3))(2)](CF(3)SO(3)) with the urea ligands in tetramethylene sulfone. The complexes have been characterized by UV-vis, FTIR, (1)H NMR, and (13)C NMR spectra along with elemental analysis. Also, X-ray crystallographic analysis of 2 confirms that the urea ligand chelates as a bidentate through the pyridyl nitrogen atom and the endo deprotonated, urea nitrogen atom to form a stable five-membered ring. Crystals of the perchlorate salt of 2 were monoclinic, space group P2(1)/c with a = 9.743(1) Å, b = 13.924(3) Å, c = 15.006(4) Å, beta = 97.07(1) degrees, and Z = 4. Reflection data (3454) with I = 3sigma(I) were refined to conventional R factors of 0.037 and 0.051. In acidic solution (0.05-1.00 M HCl at 55 degrees C), the phenyl-substituted complexes undergo hydrolysis to form the bis(ethylenediamine)(2-picolylamine-N,N')cobalt(III) ion, 4, aniline, and CO(2). The hydrolysis kinetics of the phenyl-substituted complexes were studied by UV-vis spectroscopy (I = 1.00 M HCl/LiCl). At 55 degrees C the observed rate constants fit the rate law k(obsd) = kK[H(+)]/(1 + K[H(+)]). It is proposed that the protonated urea eliminates aniline to give a coordinated isocyanate intermediate that hydrolyzes rapidly to the pyridyl methylamine complex and CO(2) via the carbamate complex. Since all of the studies of this kind to date appear to involve the NCO intermediate, it raises the prospect that urease also functions by a similar path and that urease should be tested with NCO(-) as a substrate.