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1.
Genome ; 2024 Apr 09.
Artigo em Inglês | MEDLINE | ID: mdl-38593472

RESUMO

Justicieae is the most taxonomically complex tribe in Acanthaceae. Here, we sequenced the plastome of Ecbolium viride, a medicinally important species. The genome was analyzed with previously reported plastome of Justiceae. The plastome of E. viride has quadripartite structure with a length of 151 185 bp. The comparative genomic analyses revealed no structural inversion in Justiceae and some regions (rpoC2, ycf2, ycf1, ndhH rps16-trnQ-UGG, and trnL-CAA-ycf15) exhibiting a significant level of nucleotide divergence. The positive selection analyses revealed that some species in the tribe have undergone adaptive evolution. The visualization of the boundaries between the single copy and inverted repeat regions revealed that Justiceae chloroplast genome experienced some levels of variation, which give an insight into the evolution of the species. The longest genome was in the earliest diverged taxa of the tribe Pseuderanthemum haikangense and from this genome, a series of contraction and expansion occurred contributing to the evolution of other lineages. The plastome-based phylogeny revealed and confirmed the monophyly of Justiceae, polyphyly of Justicia and supported the tribal classification Graptophyllinae, Tetrameriinae, and Isoglossinae. We proposed that Declipterinae should be treated as subtribe and the status of Justiciinae can only be confirmed after the resolution of the polyphyletic Justicia.

2.
Plants (Basel) ; 12(18)2023 Sep 14.
Artigo em Inglês | MEDLINE | ID: mdl-37765434

RESUMO

To serve human needs, non-native species are selected based on an array of functional traits, which generally confer competitive advantages to these species in their recipient environments. Identifying non-obvious functional traits that indirectly inform human selection of non-natives to introduce into urban greenspaces is not yet part of common discussions in invasion biology. We tested whether functional traits integrated within a phylogenetic framework, may reveal those subtle criteria underlying the introduction of non-native plants into urban greenspaces. We found no differences in terms of functional traits between natives and non-natives. We also found no evidence that functional traits predict nectar production, irrespective of how nectar production was measured. Finally, we found that the mean sugar concentration of nectar per flower is evolutionarily shared both within closely related non-native plants as well as within close native plants. However, phylogenetically close species share similar intraspecific variation in mass of nectar sugar per flower, but this is true only for non-native plants, thus revealing a non-obvious selection criteria of non-native plants for urban greenspaces. Our results indicate that the phylogenetic patterns of intraspecific variation in mass of nectar sugar per flower is the major criterion distinguishing non-natives from native plants in urban greenspaces in Southern England.

3.
Ann Bot ; 2023 Jul 28.
Artigo em Inglês | MEDLINE | ID: mdl-37503672

RESUMO

BACKGROUND AND AIMS: Taxonomists are primary actors of biodiversity assessment. At the same time, there is awareness by the taxonomic community at large that the field is going through a crisis, sometimes referred to as the "taxonomic impediment". Coupled with the ongoing biodiversity crisis, or 6 th mass extinction, this biodiversity impedance puts at risk the target set in the Convention on Biological Diversity's Global Biodiversity Framework vision 2050, which calls for urgent action to "…put biodiversity on a path to recovery by 2030 for the benefit of planet and people". This risk is particularly pronounced in tropical African countries where taxonomic studies are done on an ad hoc basis. In this study, our aim is to investigate the historical trends in botanical exploration of vascular plants in Nigeria and forecast the near-term (50 year) description of presently unknown species, which we use to discuss scenarios of taxonomic effort that may be necessary for a comprehensive biodiversity assessment in the country. METHODS: The study is based on a dataset from the World Checklist of Vascular Plants (WCVP), containing all vascular plant species reported to occur in Nigeria. We fit nested Bayesian time series regressions to estimate the long-term trend in the rate of description of vascular plant species in Nigeria. From these models, we use an ensemble forecast to estimate the number of species descriptions by the year 2070, and then evaluate the description rates per taxonomist required to meet this estimate under different totals of active taxonomists. KEY RESULTS: We find a striking difference in species description between Nigerian botanists and their foreign counterparts, with the former contributing relatively small numbers. Additionally, only a fraction of the authors involved in describing Nigeria's vascular plants are of indigenous origin. Our study reveals that the number of new species described annually exhibits a long-term increasing trend, with an average of 19.5 species described per year. However, after taking into account year-to-year variability and the number of taxonomists active in a given year, the long-term trend in species descriptions credibly declines over time. While the number of authors involved in describing species has generally increased over time, it remained stable since the 1950s. Predictions for the number of new species descriptions by 2070 vary by model, with an ensemble prediction estimating 1140 species descriptions, but ranging from 1004 to 2239 between individual models. CONCLUSIONS: The study estimates that current levels of taxonomic activity should lead to a 20% increase in known species of vascular plants in Nigeria over the next 50 years, which is still likely an underestimate of the true, unknown species richness. Urgent action is needed to address the taxonomic impediment so that local taxonomic studies in tropical African countries can achieve the CBD's Global Biodiversity Framework vision 2050. Here, we outline some key pathways to achieving this goal.

4.
Biology (Basel) ; 12(2)2023 Feb 08.
Artigo em Inglês | MEDLINE | ID: mdl-36829546

RESUMO

Wild edible food plants (WFPs) are valuable resources in the traditional food systems of many local cultures worldwide, particularly in underdeveloped regions. Understanding patterns of food preferences requires conducting cross-cultural food studies among various ethnic groups in a specific area. In this context, the current study aimed to record WFP use among five ethnic groups in Punjab, Pakistan, by interviewing 175 informants selected through snowball sampling. The indicator food species for different ethnic groups were calculated using indicator analysis based on the percentage of citations. A total of 71 wild food plants (WFPs) belonging to 57 genera and 27 families were observed in the study area. A high proportion of these wild food plants (WFPs) belonged to Fabaceae with eleven species (15%), followed by Moraceae with seven species (9%). Fruits were most widely used (43%), followed by leaves (19%), and shoots (16%). The majority (35 species, 49%) of plants of WFPs were eaten as cooked vegetables. A cross-cultural comparison revealed that four species overlapped among five ethnic groups (Arain, Jutt, Rajpot, Mewati, and Dogar). The Arain ethnic group gathered and consumed a remarkable number of wild plants (35 species), possibly due to a special connection with the general abundance of the local flora, and being close to nature by adopting professions more allied to WFPs in the study area. The analysis of indicator species revealed distinct significant indicator values (p ≤ 0.05) between the main food species among the various ethnic groups. Amaranthus viridis was a common indicator of food in all five ethnic groups, while Ziziphus nammularia was a common indicator food plant of the Mewati, Rajpot, and Jutt ethnic groups; these plants are important in local diets, especially during times of food scarcity brought on by disease or drought. In addition, the current study reports 20 WFPs that have been rarely documented as human food in Pakistan's ethnobotanical literature. Future development plans should consider biocultural heritage and pay appropriate attention to local ecological knowledge, dynamics, and historical exchanges of traditional food systems.

5.
Genes (Basel) ; 13(12)2022 11 30.
Artigo em Inglês | MEDLINE | ID: mdl-36553525

RESUMO

Hypoestes forskaolii is one of the most important species of the family Acanthaceae, known for its high economic and medicinal importance. It is well distributed in the Arab region as well as on the African continent. Previous studies on ethnomedicine have reported that H. forskaolii has an anti-parasitic effect as well as antimalarial and anthelmintic activities. Previous studies mainly focused on the ethnomedicinal properties, hence, there is no information on the genomic architecture and phylogenetic positions of the species within the tribe Justiceae. The tribe Justicieae is the most taxonomically difficult taxon in Acanthoideae due to its unresolved infratribal classification. Therefore, by sequencing the complete chloroplast genome (cp genome) of H. forskaolii, we explored the evolutionary patterns of the cp genome and reconstructed the phylogeny of Justiceae. The cp genome is quadripartite and circular in structure and has a length of 151,142 bp. There are 130 genes (86 coding for protein, 36 coding for tRNA and 8 coding for rRNA) present in the plastome. Analyses of long repeats showed only three types of repeats: forward, palindromic and reverse were present in the genome. Microsatellites analysis revealed 134 microsatellites in the cp genome with mononucleotides having the highest frequency. Comparative analyses within Justiceae showed that genomes structure and gene contents were highly conserved but there is a slight distinction in the location of the genes in the inverted repeat and single copy junctions. Additionally, it was discovered that the cp genome includes variable hotspots that can be utilized as DNA barcodes and tools for determining evolutionary relationships in the Justiceae. These regions include: atpH-atpI, trnK-rps16, atpB-rbcL, trnT-trnL, psbI-trnS, matK, trnH-psbA, and ndhD. The Bayesian inference phylogenetic tree showed that H. forskaolii is a sister to the Dicliptra clade and belongs to Diclipterinae. The result also confirms the polyphyly of Justicia and inclusion of Diclipterinae within justicioid. This research has revealed the phylogenetic position of H. forskaolii and also reported the resources that can be used for evolutionary and phylogenetic studies of the species and the Justicieae.


Assuntos
Acanthaceae , Genoma de Cloroplastos , Filogenia , Teorema de Bayes , Acanthaceae/genética , Genômica
6.
Sci Rep ; 12(1): 17467, 2022 10 19.
Artigo em Inglês | MEDLINE | ID: mdl-36261467

RESUMO

Environmental sustainability remains at risk, given the coupled trends of economic development with air pollution. The risk is even greater in the water-stressed world, given the potential suppression effects of air pollutants on rain formation. Here, since these suppression effects remain debated, we tested the hypothesis that air pollutants suppress rainfall in the water-stressed South Africa. This was done by fitting generalized linear models to a 21-year historical dataset of rainfall and air pollutants. We found that some gaseous pollutants and PM10 show a significant negative correlation with rainfall, perhaps due to the temperature inversion they cause, which might prevent the upward rise of humid air and convective clouds to grow high enough to produce rain. Surprisingly, as opposed to PM10, we found a rather positive significant effect of PM2.5. Altogether, our study supports the hypothesis of rain prevention by pollutants but provides some nuances that are dependent on the size of air particle matters. To achieve environmental sustainability while growing the economy, we can only rely on emission purification technologies to strike this trade-off.


Assuntos
Poluentes Atmosféricos , Poluição do Ar , Material Particulado/análise , Poluentes Atmosféricos/análise , Chuva , Água
7.
Animals (Basel) ; 12(17)2022 Sep 02.
Artigo em Inglês | MEDLINE | ID: mdl-36077997

RESUMO

Animal-derived products have an important role in treating many health conditions and have widely been used across cultures. In South Asia, ethnozoological research has been conducted only by a small number of researchers. Therefore, this area of research needs further exploration in order to preserve the eroding ethnozoological knowledge of medicinal animals severely affected by ongoing social change. This study was conducted in the region of Jammu and Kashmir from February 2019 to August 2021. The study was carried out among eight different ethnic groups living in the region. A total of 374 informants were selected and data were collected through semi-structured interviews and verified through group discussions. Data was analyzed using different statistical tools, including R 4.0.0. The cross-cultural data were compared through Bioinformatics and Evolutionary Genomics software and later subjected to further analysis, applying Pearson correlation and ordination techniques (Principal Component Analysis). We recorded a total of 79 animal species being used by the eight studied ethnic groups in the region. Wild animal species were mainly used for therapeutic purposes. Chest infections, sexual problems, and paralysis were frequently treated diseases. Flesh was the most commonly part used. The cross-cultural comparison showed a remarkable heterogeneity in the use of the animals among the different groups, which could be an effect to the historical sociocultural stratifications, as well as different religious affiliation of certain groups preventing them to forage or hunt certain animals. Some groups however showed prominent overlap of uses of some recorded species. For instance, Lerwalerwa and Bubalus bubalis were commonly used by both Gujjar and Pahari, which could be referred to the fact that they have gone through significant socio-cultural contact, and they are exogamous to each other. The Pearson correlation coefficient supported the strength and direction of an association between ethnic groups and regions. The study makes an important contribution to the field of ethnozoology in the Himalayas by providing insights to understand the historical human and nature relationships and supplying a baseline for developing future conservation efforts in the region to protect the wild fauna.

8.
Materials (Basel) ; 15(17)2022 Aug 28.
Artigo em Inglês | MEDLINE | ID: mdl-36079324

RESUMO

Al-based fluoroperovskites compounds AlMF3 (M = Cr, B) are investigated computationally and calculated their elastic, structural, optical, and electrical properties in this study utilising TB-MBJ potential (also GGA+U for AlCrF3) approximations, according to the Birch Murnaghan Equation curve and tolerance factor, these material are structurally cubic and stable. The IRelast algorithm is used to forecast elastic properties, and the outputs show that these compound are mechanically stable, anisotropic and ductile. AlBF3 has a metallic nature and overlapping states, while AlCrF3 have a narrow indirect band gap at (X-M) points of symmetry, with band gaps of 0.71 eV for AlCrF3 and zero eV for AlBF3. The partial and total density of states are being used to determine the influences of different basic states to the conduction and valence bands (TDOS & PDOS). Investigation of Optical properties shows that these compounds have low refractive index and high absorption coefficient, conductivity, reflective coefficient at high energy ranges. Owing to the indirect band gap, the applications of these compounds are deemed in conducting industries. Here we are using these compounds for first time and are examined using the computational method, which delivers a complete view into the different properties.

9.
Materials (Basel) ; 15(16)2022 Aug 18.
Artigo em Inglês | MEDLINE | ID: mdl-36013818

RESUMO

This work displays the structural, electronic, elastic, optical, and magnetic properties in spin-polarized configurations for cubic fluoroperovskite ABF3 (A = Tl, B = Nb, V) compounds studied by density functional theory (DFT) by means of the Tran-Blaha-modified Becke-Johnson (TB-mBJ) approach. The ground state characteristics of these compounds, i.e., the lattice parameters a0, bulk modulus (B), and its pressure derivative B' are investigated. The structural properties depict that the selected compounds retain a cubic crystalline structure and have stable ground state energy. Electronic-band structures and DOS (density of states) in spin-polarized cases are studied which reports the semiconducting nature of both materials. The TDOS (total density of states) and PDOS (partial density of states) studies in both spin configurations show that the maximum contributions of states to the different bands is due to the B-site (p-states) atoms as well as F (p-states) atoms. Elastic properties including anisotropy factor (A), elastic constants, i.e., C11, C12, and C44, Poisson's ratio (υ), shear modulus and (G), Young's modulus (E) are computed. In terms of elastic properties, the higher (bulk modulus) "B" and ratio of "B/G" yield that these materials exhibit a ductile character. Magnetic properties indicate that both the compounds are ferromagnetic. In addition, investigations of the optical spectra including the real (ε1ω) and imaginary (ε2ω) component of the dielectric function, refractive index nω, optical reflectivity Rω, optical conductivity σω, absorption coefficient αω, energy loss function Lω, and electron extinction coefficient kω are carried out which shows the transparent nature of TlVF3 and TlNbF3. Based on the reported research work on these selected materials, their applications can be predicted in many modern electronic gadgets.

10.
Molecules ; 27(16)2022 Aug 18.
Artigo em Inglês | MEDLINE | ID: mdl-36014503

RESUMO

This paper explains our first-principle computational investigation regarding the structural, optical, elastic, and electrical characteristics of gallium-based GaMF3 (M = Be and Ge) perovskite-type (halide-perovskite) compounds. Our current computation is based on density functional theory (DFT) and is achieved with the help of the WIEN2k code. We used the Birch-Murnaghan equation for optimization; in both compounds, we found that both GaBeF3 and GaGeF3 compounds are structurally stable. For the computation of elastic characteristics, the IRelast package for calculating elastic constants (ECs) is utilized. These compounds are mechanically ductile, scratch-resistant, anisotropic, and mechanically stable, showing huge opposition to plastic strain. The modified Becke-Johnson (TB-mBJ) potential approximation method is used to calculate different physical characteristics and shows that GaGeF3 behaves as a metal, whereas the GaBeF3 compound is insulating in nature. The involvement of various electronic states in band structures is calculated using the theory of the density of states. The different optical properties of these compounds can be studied easily using their band gap energy. At high energy ranges, these substances demonstrate strong absorption. At low energies, the GaGeF3 compound is transparent, while the GaBeF3 compound is opaque to incoming photons. Investigation of the optical characteristics has led us to the conclusion that both GaGeF3 and GaBeF3 compounds can be used for high-frequency ultraviolet device applications. This computational work is considered to be the first time that we can study these compounds, which to our knowledge have not previously been experimentally validated.

11.
PLoS One ; 17(7): e0270815, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-35877615

RESUMO

Local communities' perspectives on mining businesses are a matter of endless debate, particularly in developing countries. If misunderstood or mismanaged by authorities (local and national), these perspectives may lead to violent and deadly reactions, which are unaffordable given the tremendous contribution of mining businesses to socio-economic development. The recurrence of these violent events means that authorities and mining businesses may have been failing to understand the dynamic of local people's expectations. Here, to explain the complexity of the interactions of local people with mine businesses, we collected socio-economic data along with data on people's satisfaction levels towards the services delivered by a local mining business in the Mose Kotane Local Municipality in South Africa. Data collected were analyzed by fitting a Structural Equation Model (SEM). We found that only 4-8% of communities' expectations were met by the local mine business, and that closest communities to the mine do not benefit significantly more services than away-communities (Chi-square = 2.71, df = 4, P = 0.60). However, the proportion of moderately satisfied people (in relation to the services delivered by the mine) tends to increase when moving away from the mine while the proportion of dissatisfied people decreases. Our SEM, linking socio-economic data to communities' perspectives, shows a good fit (Fisher C value = 0; P = 1.00, n = 158). In communities away from the mine, residents who were initially happy about the establishment of the mining business tend to be satisfied with the services delivered by the mine (ß = 2.69±0.41, P<0.001) but these residents are likely to be employed people (P<0.05). In communities close to the mine, large-sized households tend to be satisfied with the mine-delivered services (P = 0.04). This is potentially due to the fact that a large household is more likely to have at least one person working for the mine. Collectively, these findings reveal how socio-economic variables determine people's perspectives on the mining business.


Assuntos
Emprego , Mineração , Comércio , Geografia , Humanos , África do Sul
12.
Antioxidants (Basel) ; 11(6)2022 May 26.
Artigo em Inglês | MEDLINE | ID: mdl-35739952

RESUMO

Aconitum chasmanthum Stapf ex Holmes, an essential and critically endangered medicinal plant from Kashmir Himalayas, was studied for its antioxidant and antifungal properties. The shade-dried powdered rhizome was extracted sequentially with hexane, ethyl acetate, and methanol. These subsequent fractions were evaluated for total phenolic content (TPC); total flavonoid content (TFC); antioxidant assays, such as 1,1-diphenyl 1-2-picryl-hydrazyl (DPPH); ferric-reducing antioxidant power (FRAP); superoxide radical scavenging (SOR); hydroxyl radical scavenging (OH) and antifungal activity using the poisoned food technique. Highest TPC (5.26 ± 0.01 mg/g) and TFC (2.92 ± 0.04 mg/g) were reported from methanolic extracts. The highest values of radical scavenging activities were also observed in methanolic extracts with IC50 values of 163.71 ± 2.69 µg/mL in DPPH, 173.69 ± 4.91 µg/mL in SOR and 159.64 ± 2.43 µg/mL in OH. The chemical profile of ethyl acetate extract was tested using HR-LCMS. Methanolic extracts also showed a promising inhibition against Aspergillus niger (66.18 ± 1.03), Aspergillus flavus (78.91 ± 1.19) and Penicillium notatum (83.14 ± 0.97) at a 15% culture filtrate concentration with minimum inhibitory concentration (MIC) values of 230 µg/mL, 200 µg/mL and 190 µg/mL, respectively. Overall, the methanolic fractions showed significant biological potential, and its pure isolates might be used to construct a potential new medicinal source.

13.
Artigo em Inglês | MEDLINE | ID: mdl-35742731

RESUMO

Pharmaceutical wastes are expected to increase given the increasing population growth rates and rapidly rising economic burden of human diseases. This challenge calls for appropriate measures for the management of such hazardous wastes. The purpose of this survey was to document and investigate existing practices for the handling, storage, and disposal of household pharmaceutical wastes (HPWs) in the Johannesburg area. Primary data were collected via online surveys with self-administered questionnaires completed by respondents. The research found that 77% (n = 286) of respondents claimed some knowledge about HPWs. Types of medicines that contributed to HPWs included painkillers or analgesics (73%, n = 270) and drugs for treating colds and flu-related illnesses (52%; n = 193). Although there were a few exceptions, the respondents generally exhibited strong disagreements with environmentally unfriendly and health-threatening disposal practices. Moreover, most participants were willing to return expired medicines to pharmacies (40.7%, n = 151), whereas only 8.6% (n = 32) opposed this solution. Awareness levels tended to vary with employment status, educational qualifications, and place of residence. However, place of residence and household size did not correlate with types of pharmaceutical waste. Additionally, the study found that education attainments significantly influenced the willingness of respondents to return pharmaceutical wastes. Finally, there were no significant differences amongst respondents in terms of waste disposal practices. Altogether, the findings suggest the need for targeted efforts to bring about sustainable waste management at a household level.


Assuntos
Eliminação de Resíduos , Gerenciamento de Resíduos , Características da Família , Humanos , Preparações Farmacêuticas , África do Sul , Inquéritos e Questionários
14.
Environ Monit Assess ; 194(3): 161, 2022 Feb 08.
Artigo em Inglês | MEDLINE | ID: mdl-35137295

RESUMO

Water scarcity remains a major threat to most rural areas in Africa due to heavy reliance on rainfed agriculture. This prompts the need to document and understand the determinants of traditional knowledge of water conservation practices. Our aim here is to document and identify the determinants of people's knowledge of traditional knowledge of water conservation in the South Africa's Eastern Cape province. A mixed research method was used. Purposive approach was used to collect data, i.e., elderly people were targeted during the face-to-face pre-COVID-19 pandemic interviews on the basis that traditional knowledge increases with age. However, people of different age groups were also included in the study especially when we employed only online questionnaire during the pandemic. We used questionnaire to collect all the data, and 93 people responded in total to our questions. We documented 10 traditional water conservation technologies. We identified rainfall variation, water quality issues, and increased water demand as the major challenges linked to these technologies, while easy access and the amount of water harvested are reported as benefits of these technologies. We found that traditional knowledge is not influenced by age (ß = -0.006 ± 0.01, P = 0.64) or gender (ß = -0.16 ± 0.25, P = 0.64) but rather correlates positively with geographic location, irrespective of the starting point of the distance measurement (distance from Port Elizabeth city: ß = 0.002 ± 0.0008, P = 0.004; distance from Ngqushwa village: ß = 0.0024 ± 0.0009, P = 0.008). Counterintuitively, formally educated people tend to have more traditional knowledge, but this is likely linked to the modern technologies (online survey and social media platforms) used to collect data during the COVID-19 pandemic. We suggest that traditional knowledge that has sustained life for centuries in rural communities must be integrated into water resource management to address water scarcity issues in rural Africa.


Assuntos
COVID-19 , Conservação dos Recursos Hídricos , Idoso , Monitoramento Ambiental , Humanos , Pandemias , SARS-CoV-2 , África do Sul
15.
PLoS One ; 16(11): e0260390, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-34847163

RESUMO

Understanding why alien plant species are incorporated into the medicinal flora in several local communities is central to invasion biology and ethnobiology. Theories suggest that alien plants are incorporated in local pharmacopoeias because they are more versatile or contribute unique secondary chemistry which make them less therapeutically redundant, or simply because they are locally more abundant than native species. However, a lack of a comprehensive test of these hypotheses limits our understanding of the dynamics of plants knowledge, use and potential implications for invasion. Here, we tested the predictions of several of these hypotheses using a unique dataset on the woody medicinal flora of southern Africa. We found that the size of a plant family predicts the number of medicinal plants in that family, a support for the non-random hypothesis of medicinal plant selection. However, we found no support for the diversification hypothesis: i) both alien and native plants were used in the treatment of similar diseases; ii) significantly more native species than alien contribute to disease treatments particularly of parasitic infections and obstetric-gynecological diseases, and iii) alien and native species share similar therapeutic redundancy. However, we found support for the versatility hypothesis, i.e., alien plants were more versatile than natives. These findings imply that, although alien plant species are not therapeutically unique, they do provide more uses than native plants (versatility), thus suggesting that they may not have been introduced primarily for therapeutic reasons. We call for similar studies to be carried out on alien herbaceous plants for a broader understanding of the integration of alien plants into the pharmacopoeias of the receiving communities.


Assuntos
Doenças dos Genitais Femininos/tratamento farmacológico , Espécies Introduzidas , Doenças Parasitárias/tratamento farmacológico , Fitoterapia , Plantas/classificação , Feminino , Humanos , Masculino , África do Sul
16.
Biol Rev Camb Philos Soc ; 96(5): 2281-2303, 2021 10.
Artigo em Inglês | MEDLINE | ID: mdl-34056816

RESUMO

Ethnobiology as a discipline has evolved increasingly to embrace theory-inspired and hypothesis-driven approaches to study why and how local people choose plants and animals they interact with and use for their livelihood. However, testing complex hypotheses or a network of ethnobiological hypotheses is challenging, particularly for data sets with non-independent observations due to species phylogenetic relatedness or socio-relational links between participants. Further, to account fully for the dynamics of local ecological knowledge, it is important to include the spatially explicit distribution of knowledge, changes in knowledge, and knowledge transmission and use. To promote the use of advanced statistical modelling approaches that address these limitations, we synthesize methodological advances for hypothesis-driven research in ethnobiology while highlighting the need for more figures than tables and more tables than text in ethnobiological literature. We present the ethnobiological motivations for conducting generalized linear mixed-effect modelling, structural equation modelling, phylogenetic generalized least squares, social network analysis, species distribution modelling, and predictive modelling. For each element of the proposed ethnobiologists quantitative toolbox, we present practical applications along with scripts for a widespread implementation. Because these statistical modelling approaches are rarely taught in most ethnobiological programs but are essential for careers in academia or industry, it is critical to promote workshops and short courses focused on these advanced methods. By embracing these quantitative modelling techniques without sacrificing qualitative approaches which provide essential context, ethnobiology will progress further towards an expansive interaction with other disciplines.


Assuntos
Modelos Estatísticos , Plantas , Humanos , Motivação , Filogenia
17.
PLoS One ; 15(9): e0239314, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-32966324

RESUMO

How could we explain the mechanism driving the effects of Urban Green Space (UGS) on human health? This mechanism is a complex one suggesting, on one hand, an indirect effect of UGS Provision (measured as quantity, quality or accessibility of UGS) on health through UGS Exposure (measured as visit frequency to UGS, duration of visit or intensity of activities taking place during the visit). On the other hand, UGS Provision may have an indirect effect on Exposure, mediated by people's perception of UGS. The mechanism further suggests that UGS Exposure may influence indirectly human Health but mediated by human motivation to use UGS. We tested these different expectations by fitting 12 alternative structural equation models (SEMs) corresponding to four different scenarios, depending on how UGS Provision was approximated. We show that SEMs where i) Provision is approximated as UGS quantity, and Exposure as duration (SEMi), ii) Provision is approximated as quantity, and Exposure as intensity (SEMii) and iii) Provision is approximated as distance of the closest UGS from people's house, and Exposure as intensity (SEMiii) are equally the best of all 12 SEMs tested. However, apart from the SEMi that has no significant path, SEMii and SEMiii have the same significant path (motivation ~ intensity; ß = 7.86±2.03, p = 0.0002), suggesting that visits to UGS may be motivated by opportunities of physical activities offered by UGS. In all our scenarios, the best SEM is always the one where Exposure is measured as intensity, irrespective of how Provision is approximated. This suggests that it is not only UGS provision that matters the most in the mechanism linking UGS to human health improvement, but rather intensity, i.e. the type of activities people engage in when they visit UGSs. Overall, our findings support the theoretical model tested in this study.


Assuntos
Cidades , Conservação dos Recursos Naturais , Saúde , Percepção , Humanos , Inquéritos e Questionários
18.
Sci Rep ; 10(1): 7038, 2020 04 27.
Artigo em Inglês | MEDLINE | ID: mdl-32341394

RESUMO

Although protected areas (PAs) are declared to provide sanctuaries for biodiversity, they are increasingly threatened by the synergistic effects of anthropic factors, invasive alien species and climate change. Consequently, interventions are required to minimize the impacts of these threats on PAs' integrity. To inform these interventions in the South African context and under the current climate change scenario, we tested for geographic patterns of alien woody species across the network of 1,453 PAs using three alien invasion indices - alien species abundance, invaded area ratio and alien species richness. Our analysis shows that, under current climate change scenario, none of the PAs would be effective in shielding against alien plants and PAs that are geographically close tend to share similar invasion patterns. In addition, PAs that are hotspots of alien species are also geographically clustered but these findings are biome-dependent. Our outlier analysis reveals not only an island of disproportionately rich PAs in alien species, but also identifies some alien-poor PAs. We suggest that PAs that are hotspots of alien species as well as outliers of disproportionately rich PAs in alien species should be priority in monitoring and invasion control programmes in the context of the ongoing climate change.

19.
Plants (Basel) ; 8(11)2019 Nov 09.
Artigo em Inglês | MEDLINE | ID: mdl-31717611

RESUMO

Targeted profiling of polyphenols in trees may reveal valuable sources of natural compounds with major applications in pharmacology and disease control. The current study targeted the profiling of polyphenols using HPLC-DAD in Quercus robur, Q. macrocarpa and Q. acutissima bark extracts. Free radical scavenging of each extract was investigated using antioxidant assays. Antimicrobial activities against a wide spectrum of bacteria and fungi were explored, as well as anticancer activities against different cancer cell lines. The HPLC-DAD analyses revealed the availability of several polyphenols in high amounts, including ellagic acid (in Q. robur) and caffeic acid (in Q. macrocarpa) in all three species. The bioactivity assay revealed high antioxidant activity in Q. robur compared to that of the other species, as well as phenolic standards. The three oak bark extracts showed clear antibacterial activities against most bacteria tested, with the highest antibacterial activities in the extracts of Q. robur. In addition, the three extracts showed higher antibacterial activities against Pseudomonas aeruginosa, Micrococcus flavus, and Escherichia coli compared to that of other bacteria. There were strong antifungal activities against some fungi, such as Aspergillus flavus, Penicillium funiculosum, and Penicillium ochrochloron. There were also noticeable anticancer activities against MCF-7, HeLa, Jurkat, and HT-29 cell lines, with the highest anticancer activity in the extracts of Q. robur. This is the first study that reveals not only novel sources of important polyphenols (e.g. ellagic acid) in Q. robur, Q. macrocarpa and Q. acutissima bark but also their anticancer activities against diverse cancer cell lines.

20.
Genome ; 62(3): 170-182, 2019 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-30865849

RESUMO

Our understanding of how the phylogenetic tree of fishes might be affected by the ongoing extinction risk is poor. This is due to the unavailability of comprehensive DNA data, especially for many African lineages. In addition, the ongoing taxonomic confusion within some lineages, e.g., Cyprinidae, makes it difficult to contribute to the debate on how the fish tree of life might be shaped by extinction. Here, we combine COI sequences and taxonomic information to assemble a fully sampled phylogeny of the African Cyprinidae and investigate whether we might lose more phylogenetic diversity (PD) than expected if currently threatened species go extinct. We found evidence for phylogenetic signal in extinction risk, suggesting that some lineages might be at higher risk than others. Based on simulated extinctions, we found that the loss of all threatened species, which approximates 37% of total PD, would lead to a greater loss of PD than expected, although highly evolutionarily distinct species are not particularly at risk. Pending the reconstruction of an improved multi-gene phylogeny, our results suggest that prioritizing high-EDGE species (evolutionary distinct and globally endangered species) in conservation programmes, particularly in some geographic regions, would contribute significantly to safeguarding the tree of life of the African Cyprinidae.


Assuntos
Evolução Biológica , Cyprinidae/classificação , Cyprinidae/genética , Código de Barras de DNA Taxonômico/métodos , DNA/genética , Espécies em Perigo de Extinção/estatística & dados numéricos , Filogenia , África , Animais , DNA/análise , Complexo IV da Cadeia de Transporte de Elétrons/genética , Extinção Biológica , Especificidade da Espécie
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