Symbiosis between Dendrobium catenatum protocorms and Serendipita indica involves the plant hypoxia response pathway.

Mycorrhizae are ubiquitous symbioses established between fungi and plant roots. Orchids, in particular, require compatible mycorrhizal fungi for seed germination and protocorm development. Unlike arbuscular mycorrhizal fungi, which have wide host ranges, orchid mycorrhizal fungi are often highly specific to their host orchids. However, the molecular mechanism of orchid mycorrhizal symbiosis is largely unknown compared to that of arbuscular mycorrhizal and rhizobial symbiosis. Here, we report that an endophytic Sebacinales fungus, Serendipita indica, promotes seed germination and the development of protocorms into plantlets in several epiphytic Epidendroideae orchid species (6 species in 2 genera), including Dendrobium catenatum, a critically endangered orchid with high medicinal value. Although plant-pathogen interaction and high meristematic activity can induce the hypoxic response in plants, it has been unclear whether interactions with beneficial fungi, especially mycorrhizal ones, also involve the hypoxic response. By studying the symbiotic relationship between D. catenatum and S. indica, we determined that hypoxia-responsive genes, such as those encoding alcohol dehydrogenase (ADH), are highly induced in symbiotic D. catenatum protocorms. In situ hybridization assay indicated that the ADH gene is predominantly expressed in the basal mycorrhizal region of symbiotic protocorms. Additionally, the ADH inhibitors puerarin and 4-methylpyrazole both decreased S. indica colonization in D. catenatum protocorms. Thus, our study reveals that S. indica is widely compatible with orchids and that ADH and its related hypoxia-responsive pathway are involved in establishing successful symbiotic relationships in germinating orchids.

Malodorous volatile organic compounds (MVOCs) formation after dewatering of wastewater sludge: Correlation with the extracellular polymeric substances (EPS) and microbial communities.

Malodorous volatile organic compounds (MVOCs) are often the key odorants in determining sludge odor character and odor impact. However, the emission characterization and generation mechanisms of MVOCs from various dewatered sludge have not been sufficiently understood partly due to the diverse and complex composition and low concentration of odorants. In this study, waste activated sludge (WAS) was collected to examine the variation of MVOC emission from sludge after different dewatering treatment in lab-scale trials. The MVOCs were measured using the electronic nose (eNose), headspace gas chromatography-coupled ion mobility spectrometry (HS-GC-IMS), and headspace solid-phase microextraction gas chromatography-mass spectrometry (HS-SPME-GC-MS). The results showed that centrifugation treatment promoted the generation of various odorous volatiles. The identified key odorants included dimethyl sulfide (DMS), dimethyl disulfide (DMDS), dimethyl trisulfide (DMTS), geosmin, and p-cresol according to their odor activity values (OAVs). The effects of the enhanced dewatering on volatile production were greater than thickening, however, the key odorants of dewatered sludge using gravity thickening varied more greatly than sludges from centrifuge thickening. The distribution of extracellular polymeric substances (EPS) and variation of microbial community showed correlations with the production of key odorants. Tryptophan-like substances in the inner layer of EPS (LB-EPS and TB-EPS) were better correlated with the key odorants. The bound EPS released by centrifugation may play the role of precursor for odorous microbial volatiles. According to the predicted functions of differential microbial genera, Desulfobulbus (Desulfobacterota), Gordonia (Actinobacteriota), and Hyphomicrobium (Proteobacteria) were associated with the production of DMS, DMDS, and DMTS, while Gordonia and Hyphomicrobium were related to p-cresol production.

The variation of odor characteristics of wastewater sludge treated by advanced anaerobic digestion (AAD) and the contribution pattern of key odorants.

Identification of the odor characteristics of wastewater sludge is important in the evaluation of sludge quality and disposal options considering that sludge odor nuisance may cause major environmental issues. In this study, raw sludge and sludge cake were collected from five WWTPs applied advanced anaerobic digestion (AAD) sludge treatment process to clarify the variation of odor characteristics using sensory analysis and instrumental analysis. The electronic nose, gas chromatography-ion mobility spectrometry (GC-IMS) and gas chromatography-triple quadrupole tandem mass spectrometry (GC-MS/MS) were used to profile and identify the chemical composition of key odorants. A total of 20 odorants were identified and quantified, including 6 groups of chemicals, among which volatile sulfur compounds (VSCs), indole, 3-methylindole and geosmin were identified as key odorants. The odor of the dewatered digested sludge was improved by means of changing the odor character from fecal/sulfide to earthy odor due to the reduction in VSCs concentration. The AAD and subsequent dewatering process resulted in effective removal of VSCs, which are important constituents that impact the sludge odor characteristics through synergistic effect on fecal odorants and masking effect on earthy odorants. Moreover, due to the variation of sludge quality after AAD treatment, the emission capacity of indole, 3-methylindole, and other volatiles increased, which could not be neglected for the formation of unique sludge odor.

Effect of low-temperature thermal drying on malodorous volatile organic compounds (MVOCs) emission of wastewater sludge: The relationship with microbial communities.

Sludge treatment processes are the main source of nuisance odors in wastewater treatment plants. Apart from well-known odorants such as NH3 and H2S, malodorous volatile organic compounds (MVOCs) contribute largely to nuisance odors but are less concerned. In this work, the emission of MVOCs from wastewater sludges at different processing stages was measured, and the effects of dewatering and low-temperature thermal drying on the generation of sludge odor were investigated. The MVOCs were analyzed by olfactory measurements, headspace gas chromatography-coupled ion mobility spectrometry (HS-GC-IMS), and headspace solid-phase microextraction gas chromatography-mass spectrometry (HS-SPME-GC-MS). Low-temperature thermal drying treatment changed the odor categories and increased the odor intensity (OI) from moderate level (8-9) for raw sludges to strong (>10) for dried sludge. The odor emission capacity of MVOCs, namely the concentration of MVOCs, increased for dried sludge. The major odorants of sludge after different processes included 2-MIB, geosmin, dimethyl disulfide (DMDS), dimethyl trisulfide (DMTS), hexanal, and decanal according to their odor activity values (OAVs). The bacterial community structures showed a correlation with the key MVOC odorants. Specifically, there was a significant positive correlation between the concentration of key odorants and the relative abundance of the phyla of Actinobacteria and Chloroflexi. Thus, low-temperature thermal drying had a significant effect on odor formation by acting on the microbial community of sludge.

High Ambient Temperature Regulated the Plant Systemic Response to the Beneficial Endophytic Fungus Serendipita indica.

Most plants in nature establish symbiotic associations with endophytic fungi in soil. Beneficial endophytic fungi induce a systemic response in the aboveground parts of the host plant, thus promoting the growth and fitness of host plants. Meanwhile, temperature elevation from climate change widely affects global plant biodiversity as well as crop quality and yield. Over the past decades, great progresses have been made in the response of plants to high ambient temperature and to symbiosis with endophytic fungi. However, little is known about their synergistic effect on host plants. The endophytic fungus Serendipita indica colonizes the roots of a wide range of plants, including Arabidopsis. Based on the Arabidopsis-S. indica symbiosis experimental system, we analyzed the synergistic effect of high ambient temperature and endophytic fungal symbiosis on host plants. By transcriptome analysis, we found that DNA replication-related genes were significantly upregulated during the systemic response of Arabidopsis aboveground parts to S. indica colonization. Plant hormones, such as jasmonic acid (JA) and ethylene (ET), play important roles in plant growth and systemic responses. We found that high ambient temperature repressed the JA and ET signaling pathways of Arabidopsis aboveground parts during the systemic response to S. indica colonization in roots. Meanwhile, PIF4 is the central hub transcription factor controlling plant thermosensory growth under high ambient temperature in Arabidopsis. PIF4 is also involving JA and/or ET signaling pathway. We found that PIF4 target genes overlapped with many differentially expressed genes (DEGs) during the systemic response, and further showed that the growth promotion efficiency of S. indica on the pif4 mutant was higher than that on the wild-type plants. In short, our data showed that high ambient temperature strengthened the growth promotion effect of S. indica fungi on the aboveground parts of the host plant Arabidopsis, and the growth promotion effect of the systemic response under high ambient temperature was regulated by PIF4.

Profiling and characterization of odorous volatile compounds from the industrial fermentation of erythromycin.

Complaints caused by odors from the fermentation production of pharmaceuticals are common in China. The elimination of odor remains a challenge for the pharmaceutical industry to meet the increasingly strict environment regulations. Erythromycin is a representative antibiotic produced by microbial fermentation. The fermentation exhaust gas of erythromycin fermentation has an unpleasant odor, but the composition of the key odorants has not been identified. The major odorants from the fermentation production of erythromycin API were analyzed by electronic nose, olfactory measurements, gas chromatography-coupled ion mobility spectrometry (GC-IMS) and gas chromatography-mass spectrometry (GC-MS) analysis. Two compounds, 2-methylisoborneol (2-MIB) and geosmin, were identified as the major odorants of erythromycin fermentation. These had not been detected before using only GC-MS analysis of exhaust gas. Aldehydes, including hexanal, octanal, decanal, and benzaldehyde, also contribute to the odor. The composition analysis of odorants using the fermentation broth headspace was more efficient and reliable, considering the significant dilution effect of exhaust gas. The concentration of 2-MIB and geosmin in the fermentation broth greatly exceeded their odor thresholds. The production of major odorants started in the early fermentation stage and became significant in the middle stage (30-70 h). Due to the extremely low odor thresholds of 2-MIB and geosmin, advanced purification may require deodorization of erythromycin fermentation exhaust gas.

Impact of Composting Methods on Nitrogen Retention and Losses during Dairy Manure Composting.

Currently, composting is one of the most effective methods for treating fecal waste on large-scale livestock and poultry farms, but the quality effects of different composting methods are different. In this study, we implemented four composting methods, including farmer compost (FC), anaerobic compost (AnC), mixed compost (MC), and aerobic compost (AC), to study the effects of different composting methods on nitrogen (N) losses while composting dairy manure. Our results showed that the germination indexes (GIs) of three of the composting treatments (AnC, MC, and AC) exceeded 80%, which met the maturity requirements for composted products. Ammonia (NH3) emissions were the main contributor to nitrogen losses, while accumulated nitrous oxide (N2O) emissions accounted for the lowest proportion of nitrogen losses. The cumulative N losses via the leachate of the AC treatment were the lowest and accounted for 0.38% of the initial total nitrogen (TN). The accumulated N losses of the AC, FC, AnC, and MC treatments accounted for 13.13% 15.98%, 15.08%, and 19.75%, respectively, of the initial TN. Overall, the AC method significantly reduced N losses via leachates, further reducing TN losses. This observation suggests that AC might be an appropriate method for highly efficient nitrogen management during dairy manure composting.

[VOCs and Odors Control and Development in Pharmaceutical Fermentation Industry].

Volatile organic compounds (VOCs) and odors, which pose potential hazards to human health and the ecosystem, are two of the most important pollutants emitted from the pharmaceutical fermentation industry. Currently, basic research on the characteristics of the pollution and effective prevention technology for VOCs and odors emitted from the pharmaceutical fermentation industry are limited. Specifically, the pharmaceutical fermentation industry lacks adequate theoretical guidance on the supervision and control of VOCs and odors, and some companies even face relocations. Using the pharmaceutical fermentation industry as the study object, the pollution characteristics of VOCs and odors emitted from different production workshops, sewage treatment stations, and the disposal of pharmaceutical residues were assessed. Based on the studies above, the progress of research into representative control technologies were also reviewed systematically. For VOCs and odors control in the pharmaceutical fermentation industry, four suggestions for future research were proposed:① The production processes should be optimized, and the discharge of pollution should be reduced throughout the entire processes; ② Basic research should be carried out on the pollution characteristics of the VOCs and odors emitted from the pharmaceutical fermentation industry, and a rapid and effective method to trace the sources of VOCs and odors should be established; ③ A comprehensive evaluation of control technologies should be conducted, taking cost and efficiency into account; ④ Emission standards and technical orders for VOCs and odors in the pharmaceutical fermentation industry should be formulated and implemented immediately.