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1.
Sci Total Environ ; : 174378, 2024 Jul 01.
Artigo em Inglês | MEDLINE | ID: mdl-38960201

RESUMO

Understanding the Amazon Rainforest's response to shifts in precipitation is paramount with regard to its sensitivity to climate change and deforestation. Studies using Dynamic Global Vegetation Models (DGVMs) typically only explore a range of socio-economically plausible pathways. In this study, we applied the state-of-the-art DGVM LPJmL to simulate the Amazon forest's response under idealized scenarios where precipitation is linearly decreased and subsequently increased between current levels and zero. Our results indicate a nonlinear but reversible relationship between vegetation Above Ground Biomass (AGB) and Mean Annual Precipitation (MAP), suggesting a threshold at a critical MAP value, below which vegetation biomass decline accelerates with decreasing MAP. We find that approaching this critical threshold is accompanied by critical slowing down, which can hence be expected to warn of accelerating biomass decline with decreasing rainfall. The critical precipitation threshold is lowest in the northwestern Amazon, whereas the eastern and southern regions may already be below their critical MAP thresholds. Overall, we identify the seasonality of precipitation and the potential evapotranspiration (PET) as the most important parameters determining the threshold value. While vegetation fires show little effect on the critical threshold and the biomass pattern in general, the ability of trees to adapt to water stress by investing in deep roots leads to increased biomass and a lower critical threshold in some areas in the eastern and southern Amazon where seasonality and PET are high. Our findings underscore the risk of Amazon forest degradation due to changes in the water cycle, and imply that regions that are currently characterized by higher water availability may exhibit heightened vulnerability to future drying.

2.
J Plant Physiol ; 301: 154313, 2024 Jul 06.
Artigo em Inglês | MEDLINE | ID: mdl-38991233

RESUMO

Drought is a principal environmental factor that affects the growth and development of plants. Accordingly, plants have evolved adaptive mechanisms to cope with adverse environmental conditions. One of the mechanisms is gene regulation mediated by microRNAs (miRNAs). miRNAs are regarded as primary modulators of gene expression at the post-transcriptional level and have been shown to participate in drought stress response, including ABA response, auxin signaling, antioxidant defense, and osmotic regulation through downregulating the corresponding targets. miRNA-based genetic reconstructions have the potential to improve the tolerance of plants to drought. However, there are few precise classification and discussion of miRNAs in specific response behaviors to drought stress and their applications. This review summarized and discussed the specific response behaviors of miRNAs under drought stress and the role of miRNAs as regulators in the response of plants to drought and highlighted that the modification of miRNAs might effectively improve the tolerance of plants to drought.

3.
Plant Physiol Biochem ; 214: 108919, 2024 Jul 06.
Artigo em Inglês | MEDLINE | ID: mdl-38991591

RESUMO

Drought stress caused by the global climate considerably disturbs plant yield and growth. Here, we explored the putative roles of silicon in repressing drought mechanisms in pepper and the prominent involvement of secondary metabolites, GA pathway, and photosystem II. Our research revealed that the transcript level of the flavonoid biosynthesis-associated genes, including the PAL, 4-CL, CHS, FLS-1, F3H and DFR, progressively induced in the pepper leaves treated with silicon during the drought stress duration. Moreover, the phenolic and flavonoid compounds extensively induced in the pepper plants. Furthermore, the pepper plants markedly inhibited chlorophyll catabolic-allied genes, senescence-related marker gene, and the Rbohs gene. Silicon application also sustained the membrane stability, supported via fewer electrolyte leakage processes and minor, O2- H2O2 and MDA levels during drought. Apart from this, the pepper plants significantly induced the expression level of the photosystem II-related genes, osmoprotectants pathway-associated genes, and antioxidant defense genes. Moreover, the GA biosynthesis genes were prompted, while the ABA signaling and biosynthesis genes were suppressed in the silicon-supplemented plants. These consequences infer that the role of Si supplementation on enhancing drought tolerance could be elucidated through the activation of secondary metabolites, flavonoid biosynthesis, osmoprotectants, GA pathway, the efficiency of PSII, and the suppression of chlorophyll degradation. Our research outcomes unveil new and remarkable characteristics of silicon supplementation and offer a series of candidate targets for improving the tolerance of pepper plants to drought stress.

4.
New Phytol ; 2024 Jul 11.
Artigo em Inglês | MEDLINE | ID: mdl-38992951

RESUMO

Drought, especially terminal drought, severely limits wheat growth and yield. Understanding the complex mechanisms behind the drought response in wheat is essential for developing drought-resistant varieties. This study aimed to dissect the genetic architecture and high-yielding wheat ideotypes under terminal drought. An automated high-throughput phenotyping platform was used to examine 28 392 image-based digital traits (i-traits) under different drought conditions during the flowering stage of a natural wheat population. Of the i-traits examined, 17 073 were identified as drought-related. A genome-wide association study (GWAS) identified 5320 drought-related significant single-nucleotide polymorphisms (SNPs) and 27 SNP clusters. A notable hotspot region controlling wheat drought tolerance was discovered, in which TaPP2C6 was shown to be an important negative regulator of the drought response. The tapp2c6 knockout lines exhibited enhanced drought resistance without a yield penalty. A haplotype analysis revealed a favored allele of TaPP2C6 that was significantly correlated with drought resistance, affirming its potential value in wheat breeding programs. We developed an advanced prediction model for wheat yield and drought resistance using 24 i-traits analyzed by machine learning. In summary, this study provides comprehensive insights into the high-yielding ideotype and an approach for the rapid breeding of drought-resistant wheat.

5.
Int J Mol Sci ; 25(13)2024 Jun 26.
Artigo em Inglês | MEDLINE | ID: mdl-39000082

RESUMO

Drought stress is one of the significant abiotic stresses that limit soybean (Glycine max [L.] Merr.) growth and production. Ankyrin repeat (ANK) proteins, being highly conserved, occupy a pivotal role in diverse biological processes. ANK genes were classified into nine subfamilies according to conserved domains in the soybean genome. However, the function of ANK-TM subfamily proteins (Ankyrin repeat proteins with a transmembrane domain) in the abiotic-stress response to soybean remains poorly understood. In this study, we first demonstrated the subcellular localization of GmANKTM21 in the cell membrane and nucleus. Drought stress-induced mRNA levels of GmANKTM21, which encodes proteins belonging to the ANK-TM subfamily, Transgenic 35S:GmANKTM21 soybean improved drought tolerance at the germination and seedling stages, with higher stomatal closure in soybean, lower water loss, lower malondialdehyde (MDA) content, and less reactive oxygen species (ROS) production compared with the wild-type soybean (Dongnong50). RNA-sequencing (RNA-seq) and RT-qPCR analysis of differentially expressed transcripts in overexpression of GmANKTM21 further identified potential downstream genes, including GmSPK2, GmSPK4, and GmCYP707A1, which showed higher expression in transgenic soybean, than those in wild-type soybean and KEGG enrichment analysis showed that MAPK signaling pathways were mostly enriched in GmANKTM21 overexpressing soybean plants under drought stress conditions. Therefore, we demonstrate that GmANKTM21 plays an important role in tolerance to drought stress in soybeans.


Assuntos
Secas , Regulação da Expressão Gênica de Plantas , Glycine max , Sistema de Sinalização das MAP Quinases , Proteínas de Plantas , Estômatos de Plantas , Plantas Geneticamente Modificadas , Estresse Fisiológico , Glycine max/genética , Glycine max/metabolismo , Glycine max/fisiologia , Glycine max/crescimento & desenvolvimento , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Estômatos de Plantas/genética , Estômatos de Plantas/fisiologia , Estômatos de Plantas/metabolismo , Espécies Reativas de Oxigênio/metabolismo , Repetição de Anquirina/genética , Resistência à Seca
6.
Int J Mol Sci ; 25(13)2024 Jun 26.
Artigo em Inglês | MEDLINE | ID: mdl-39000081

RESUMO

Spermidine is well known to accumulate in plants exposed to drought, but the regulatory network associated with its biosynthesis and accumulation and the underlying molecular mechanisms remain unclear. Here, we demonstrated that the Trifolium repens TrMYB33 relayed the ABA signal to modulate drought-induced spermidine production by directly regulating the expression of TrSAMS1, which encodes an S-adenosylmethionine synthase. This gene was identified by transcriptome and expression analysis in T. repens. TrSAMS1 overexpression and its pTRV-VIGS-mediated silencing demonstrated that TrSAMS1 is a positive regulator of spermidine synthesis and drought tolerance. TrMYB33 was identified as an interacting candidate through yeast one-hybrid library screening with the TrSAMS1 promoter region as the bait. TrMYB33 was confirmed to bind directly to the predicted TAACCACTAACCA (the TAACCA MYB binding site is repeated twice in tandem) within the TrSAMS1 promoter and to act as a transcriptional activator. Additionally, TrMYB33 contributed to drought tolerance by regulating TrSAMS1 expression and modulating spermidine synthesis. Additionally, we found that spermidine accumulation under drought stress depended on ABA and that TrMYB33 coordinated ABA-mediated upregulation of TrSAMS1 and spermidine accumulation. This study elucidated the role of a T. repens MYB33 homolog in modulating spermidine biosynthesis. The further exploitation and functional characterization of the TrMYB33-TrSAMS1 regulatory module can enhance our understanding of the molecular mechanisms responsible for spermidine accumulation during drought stress.


Assuntos
Ácido Abscísico , Secas , Regulação da Expressão Gênica de Plantas , Proteínas de Plantas , Espermidina , Trifolium , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Ácido Abscísico/metabolismo , Trifolium/genética , Trifolium/metabolismo , Espermidina/metabolismo , Espermidina/biossíntese , Regiões Promotoras Genéticas , Estresse Fisiológico , Fatores de Transcrição/metabolismo , Fatores de Transcrição/genética , Transdução de Sinais , Resistência à Seca
7.
Plant Physiol Biochem ; 214: 108890, 2024 Jun 27.
Artigo em Inglês | MEDLINE | ID: mdl-38950462

RESUMO

Drought stress affects plant photosynthesis, leading to a reduction in the quality and yield of crop production. Non-foliar organs play a complementary role in photosynthesis during plant growth and development and are important sources of energy. However, there are limited studies on the performance of non-foliar organs under drought stress. The photosynthetic-responsive differences of oat spikelet organs (glumes, lemmas and paleas) and flag leaves to drought stress during the grain-filling stage were examined. Under drought stress, photosynthetic performance of glume is more stable. Intercellular CO2 concentration (Ci), chlorophyll b, maximum photochemical efficiency of photosystem II. (Fv/Fm), and electron transport rate (ETR) were significantly higher in the glume compared to the flag leaf. The transcriptome data revealed that stable expression of the RCCR gene under drought stress was the main reason for maintaining higher chlorophyll content in the glume. Additionally, no differential expression genes (DEGs) related to Photosystem Ⅰ (PSI) reaction centers were found, and drought stress primarily affects the Photosystem II (PSII) reaction center. In spikelets, the CP43 and CP47 subunits of PSII and the AtpB subunit of ATP synthase were increased on the thylakoid membrane, contributing to photosynthetic stabilisation of spikelets as a means of supplementing the limited photosynthesis of the leaves under drought stress. The results enhanced understanding of the photosynthetic performance of oat spikelet during the grain-filling stage, and also provided an important basis on improving the photosynthetic capacity of non-foliar organs for the selection and breeding new oat varieties with high yield and better drought resistance.

8.
Tree Physiol ; 2024 Jul 02.
Artigo em Inglês | MEDLINE | ID: mdl-38952005

RESUMO

Forest ecosystems face increasing drought exposure due to climate change, necessitating accurate measurements of vegetation water content to assess drought stress and tree mortality risks. While Frequency Domain Reflectometry offers a viable method for monitoring stem water content by measuring dielectric permittivity, challenges arise from uncertainties in sensor calibration linked to wood properties and species variability, impeding its wider usage. We sampled tropical forest trees and palms in eastern Amazônia, to evaluate how sensor output differences are controlled by wood density, temperature and taxonomic identity. Three individuals per species were felled and cut into segments (total n = 262), within a diverse dataset comprising five dicotyledonous tree-and three monocotyledonous palm species on a wide range of wood densities. Water content was estimated gravimetrically for each segment using a temporally explicit wet-up/dry-down approach, and the relationship with the dielectric permittivity was examined. Woody tissue density had no significant impact on the calibration, but species identity and temperature significantly affected sensor readings. The temperature artefact was quantitatively important at large temperature differences which may have led to significant bias of daily and seasonal water content dynamics in previous studies. We established the first tropical tree and palm calibration equation that performed well for estimating water content. Notably, we demonstrated that the sensitivity remained consistent across species, enabling the creation of a simplified one-slope calibration for accurate, species-independent measurements of relative water content. Our one-slope calibration serves as a general, and species-independent standard calibration for assessing relative water content in woody tissue, offering a valuable tool for quantifying drought responses and stress in trees and forest ecosystems.

9.
Plant J ; 2024 Jul 01.
Artigo em Inglês | MEDLINE | ID: mdl-38949092

RESUMO

The plant hormone abscisic acid (ABA) regulates essential processes in plant development and responsiveness to abiotic and biotic stresses. ABA perception triggers a post-translational signaling cascade that elicits the ABA gene regulatory network (GRN), encompassing hundreds of transcription factors (TFs) and thousands of transcribed genes. To further our knowledge of this GRN, we performed an RNA-seq time series experiment consisting of 14 time points in the 16 h following a one-time ABA treatment of 5-week-old Arabidopsis rosettes. During this time course, ABA rapidly changed transcription levels of 7151 genes, which were partitioned into 44 coexpressed modules that carry out diverse biological functions. We integrated our time-series data with publicly available TF-binding site data, motif data, and RNA-seq data of plants inhibited in translation, and predicted (i) which TFs regulate the different coexpression clusters, (ii) which TFs contribute the most to target gene amplitude, (iii) timing of engagement of different TFs in the ABA GRN, and (iv) hierarchical position of TFs and their targets in the multi-tiered ABA GRN. The ABA GRN was found to be highly interconnected and regulated at different amplitudes and timing by a wide variety of TFs, of which the bZIP family was most prominent, and upregulation of genes encompassed more TFs than downregulation. We validated our network models in silico with additional public TF-binding site data and transcription data of selected TF mutants. Finally, using a drought assay we found that the Trihelix TF GT3a is likely an ABA-induced positive regulator of drought tolerance.

10.
BMC Genomics ; 25(1): 657, 2024 Jul 02.
Artigo em Inglês | MEDLINE | ID: mdl-38956453

RESUMO

BACKGROUND: Histone deacetylases (HDACs) and histone acetyltransferases (HATs) are involved in plant growth and development as well as in response to environmental changes, by dynamically regulating gene acetylation levels. Although there have been numerous reports on the identification and function of HDAC and HAT in herbaceous plants, there are fewer report related genes in woody plants under drought stress. RESULTS: In this study, we performed a genome-wide analysis of the HDAC and HAT families in Populus trichocarpa, including phylogenetic analysis, gene structure, conserved domains, and expression analysis. A total of 16 PtrHDACs and 12 PtrHATs were identified in P. trichocarpa genome. Analysis of cis-elements in the promoters of PtrHDACs and PtrHATs revealed that both gene families could respond to a variety of environmental signals, including hormones and drought. Furthermore, real time quantitative PCR indicated that PtrHDA906 and PtrHAG3 were significantly responsive to drought. PtrHDA906, PtrHAC1, PtrHAC3, PtrHAG2, PtrHAG6 and PtrHAF1 consistently responded to abscisic acid, methyl jasmonate and salicylic acid under drought conditions. CONCLUSIONS: Our study demonstrates that PtrHDACs and PtrHATs may respond to drought through hormone signaling pathways, which helps to reveal the hub of acetylation modification in hormone regulation of abiotic stress.


Assuntos
Secas , Regulação da Expressão Gênica de Plantas , Histona Acetiltransferases , Histona Desacetilases , Filogenia , Populus , Histona Desacetilases/genética , Histona Desacetilases/metabolismo , Histona Acetiltransferases/genética , Histona Acetiltransferases/metabolismo , Populus/genética , Populus/enzimologia , Estresse Fisiológico/genética , Perfilação da Expressão Gênica , Regiões Promotoras Genéticas , Genoma de Planta , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo
11.
Adv Sci (Weinh) ; : e2400445, 2024 Jul 10.
Artigo em Inglês | MEDLINE | ID: mdl-38984458

RESUMO

Global water scarcity and extreme weather intensify drought stress, significantly reducing cotton yield and quality worldwide. Drought treatments are conducted using a population of chromosome segment substitution lines generated from E22 (G. hirsutum) and 3-79 (G. barbadense) as parental lines either show superior yields or fiber quality under both control and drought conditions. Fourteen datasets, covering 4 yields and 4 quality traits, are compiled and assessed for drought resistance using the drought resistance coefficient (DRC) and membership function value of drought resistance (MFVD). Genome-wide association studies, linkage analysis, and bulked segregant analysis are combined to analyze the DR-related QTL. A total of 121 significant QTL are identified by DRC and MFVD of the 8 traits. CRISPR/Cas9 and virus-induced gene silencing techniques verified DRR1 and DRT1 as pivotal genes in regulating drought resistant of cotton, with hap3-79 exhibiting greater drought resistance than hapE22 concerning DRR1 and DRT1. Moreover, 14 markers with superior yield and fiber quality are selected for drought treatment. This study offers valuable insights into yield and fiber quality variations between G. hirsutum and G. barbadense amid drought, providing crucial theoretical and technological backing for developing cotton varieties resilient to drought, with high yield and superior fiber quality.

12.
J Exp Bot ; 75(13): 3754-3757, 2024 Jul 10.
Artigo em Inglês | MEDLINE | ID: mdl-38982746

RESUMO

This article comments on: Turc B, Sahay S, Haupt J, de Oliveira Santos T, Bai G, Glowacka K. 2024. Up-regulation of non-photochemical quenching improves water use efficiency and reduces whole-plant water consumption under drought in Nicotianatabacum. Journal of Experimental Botany 75, 3959-3972.


Assuntos
Agricultura , Água , Água/metabolismo , Agricultura/métodos , Secas
13.
Sci Total Environ ; 947: 174530, 2024 Jul 08.
Artigo em Inglês | MEDLINE | ID: mdl-38986713

RESUMO

The intensity and frequency of drought are increasing in the tropical zone of China under global warming, and accurate assessment of drought severity and duration is critical for sustainable ecosystem management. Previous studies usually rely on one or more drought indices calculated from meteorological station or reanalysis data. However, the assessment results based on these drought indices are not consistent, which can be due to the differences in data sources and index parameters. In this study, we aim to identify the optimal dataset and drought index, and accurately evaluate the drought severity and drought duration in the tropical zone of China. We assessed the accuracy of five drought indices, namely Precipitation Anomaly in Percentage (PA), Relative Moisture Index (MI), Standardized Precipitation Index (SPI), Standardized Precipitation Evapotranspiration Index (SPEI) and Meteorological Drought Composite Index (MCI), calculated from meteorological station data and the China Meteorological Forcing Dataset (CMFD) with respect to drought records compiled by local government. Results indicate that the drought index calculated based on meteorological station data can better match the government-compiled drought records than CMFD. MI is the optimal index for drought severity and duration assessment in study area, especially for winter-spring drought and severe drought, followed by PA. The normalized bell-shaped line of fitted precipitation in winter and spring is biased towards the less rainy side in SPI calculations, which leads to more underestimation even for officially recommended MCI, and actual water supply are also misrepresented in SPEI calculations. This study offers valuable insights for policymakers to use optimal dataset and drought index to accurately assess the drought events, and take effective measures to alleviate its impact on tropical ecosystems in China.

14.
Sci Rep ; 14(1): 15985, 2024 Jul 10.
Artigo em Inglês | MEDLINE | ID: mdl-38987560

RESUMO

Drought stress is a major abiotic stress affecting the performance of wheat (Triticum aestivum L.). The current study evaluated the effects of drought on wheat phenology, physiology, and biochemistry; and assessed the effectiveness of foliar-applied sulfhydryl thiourea to mitigate drought-induced oxidative stress. The treatments were: wheat varieties; V1 = Punjab-2011, V2 = Galaxy-2013, V3 = Ujala-2016, and V4 = Anaaj-2017, drought stress; D1 = control (80% field capacity [FC]) and D2 = drought stress (40% FC), at  the reproductive stage, and sulfhydryl thiourea (S) applications; S0 = control-no thiourea and S1 = foliar thiourea application @ 500 mg L-1. Results of this study indicated that growth parameters, including height, dry weight, leaf area index (LAI), leaf area duration (LAD), crop growth rate (CGR), net assimilation rate (NAR) were decreased under drought stress-40% FC, as compared to control-80% FC. Drought stress reduced the photosynthetic efficiency, water potential, transpiration rates, stomatal conductances, and relative water contents by 18, 17, 26, 29, and 55% in wheat varieties as compared to control. In addition, foliar chlorophyll a, and b contents were also lowered under drought stress in all wheat varieties due to an increase in malondialdehyde and electrolyte leakage. Interestingly, thiourea applications restored wheat growth and yield attributes by improving the production and activities of proline, antioxidants, and osmolytes under normal and drought stress as compared to control. Thiourea applications improved the osmolyte defense in wheat varieties as peroxidase, superoxide dismutase, catalase, proline, glycine betaine, and total phenolic were increased by 13, 20, 12, 17, 23, and 52%; while reducing the electrolyte leakage and malondialdehyde content by 49 and 32% as compared to control. Among the wheat varieties, Anaaj-2017 showed better resilience towards drought stress and also gave better response towards thiourea application based on morpho-physiological, biochemical, and yield attributes as compared to Punjab-2011, Galaxy-2013, and Ujala-2016. Eta-square values showed that thiourea applications, drought stress, and wheat varieties were key contributors to most of the parameters measured. In conclusion, the sulfhydryl thiourea applications improved the morpho-physiology, biochemical, and yield attributes of wheat varieties, thereby mitigating the adverse effects of drought.  Moving forward, detailed studies pertaining to the molecular and genetic mechanisms under sulfhydryl thiourea-induced drought stress tolerance are warranted.


Assuntos
Secas , Estresse Oxidativo , Folhas de Planta , Tioureia , Triticum , Triticum/efeitos dos fármacos , Triticum/crescimento & desenvolvimento , Triticum/metabolismo , Triticum/fisiologia , Tioureia/farmacologia , Estresse Oxidativo/efeitos dos fármacos , Folhas de Planta/efeitos dos fármacos , Folhas de Planta/metabolismo , Antioxidantes/metabolismo , Fotossíntese/efeitos dos fármacos , Clorofila/metabolismo , Água/metabolismo , Estresse Fisiológico/efeitos dos fármacos
15.
AoB Plants ; 16(4): plae036, 2024 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-38988683

RESUMO

Competition affects mixed-mating strategies by limiting available abiotic or biotic resources such as nutrients, water, space, or pollinators. Cleistogamous species produce closed (cleistogamous, CL), obligately selfed, simultaneously with open (chasmogamous, CH), potentially outcrossed flowers. The effects of intraspecific competition on fitness and cleistogamy variation can range from limiting the production of costly CH flowers because of resource limitation, to favouring CH production because of fitness advantages of outcrossed, CH offspring. Moreover, the effects of competition can be altered when it co-occurs with other environmental variations. We grew plants from seven populations of the ruderal Lamium amplexicaule, originating from different climates and habitats, in a common garden experiment combining drought, interspecific competition, and seasonal variation. All these parameters have been shown to influence the degree of cleistogamy in the species on their own. In spring, competition and drought negatively impacted fitness, but the CL proportion only increased when plants were exposed to both treatments combined. We did not observe the same results in autumn, which can be due to non-adaptive phenotypic variation, or to differences in soil compactness between seasons. The observed responses are largely due to phenotypic plasticity, but we also observed phenotypic differentiation between populations for morphological, phenological, and cleistogamy traits, pointing to the existence of different ecotypes. Our data do not support the hypothesis that CL proportion should decrease when resources are scarce, as plants with reduced growth had relatively low CL proportions. We propose that variation in cleistogamy could be an adaptation to pollinator abundance, or to environment-dependent fitness differences between offspring of selfed and outcrossed seeds, two hypotheses worth further investigation. This opens exciting new possibilities for the study of the maintenance of mixed-mating systems using cleistogamous species as models that combine the effects of inbreeding and reproductive costs.

16.
MethodsX ; 13: 102800, 2024 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-38989261

RESUMO

Drought prediction is a complex phenomenon that impacts human activities and the environment. For this reason, predicting its behavior is crucial to mitigating such effects. Deep learning techniques are emerging as a powerful tool for this task. The main goal of this work is to review the state-of-the-art for characterizing the deep learning techniques used in the drought prediction task. The results suggest that the most widely used climate indexes were the Standardized Precipitation Index (SPI) and the Standardized Precipitation Evapotranspiration Index (SPEI). Regarding the multispectral index, the Normalized Difference Vegetation Index (NDVI) is the indicator most utilized. On the other hand, countries with a higher production of scientific knowledge in this area are located in Asia and Oceania; meanwhile, America and Africa are the regions with few publications. Concerning deep learning methods, the Long-Short Term Memory network (LSTM) is the algorithm most implemented for this task, either implemented canonically or together with other deep learning techniques (hybrid methods). In conclusion, this review reveals a need for more scientific knowledge about drought prediction using multispectral indices and deep learning techniques in America and Africa; therefore, it is an opportunity to characterize the phenomenon in developing countries.

17.
Plants (Basel) ; 13(13)2024 Jun 25.
Artigo em Inglês | MEDLINE | ID: mdl-38999589

RESUMO

S. scabra is an important forage and extremophilic plant native to the Brazilian Caatinga semiarid region. It has only recently been subjected to omics-based investigations, and the generated datasets offer insights into biotechnologically significant candidates yet to be thoroughly examined. INSs (inositol and its derivatives) and RFO (raffinose oligosaccharide family) pathways emerge as pivotal candidates, given their critical roles in plant physiology. The mentioned compounds have also been linked to negative impacts on the absorption of nutrients in mammals, affecting overall nutritional intake and metabolism. Therefore, studying these metabolic pathways is important not just for plants but also for animals who depend on them as part of their diet. INS and RFO pathways in S. scabra stood out for their abundance of identified loci and enzymes. The enzymes exhibited genomic redundancy, being encoded by multiple loci and various gene families. The phylogenomic analysis unveiled an expansion of the PIP5K and GolS gene families relative to the immediate S. scabra ancestor. These enzymes are crucial for synthesizing key secondary messengers and the RFO precursor, respectively. Transcriptional control of the studied pathways was associated with DOF-type, C2H2, and BCP1 transcription factors. Identification of biological processes related to INS and RFO metabolic routes in S. scabra highlighted their significance in responding to stressful conditions prevalent in the Caatinga environment. Finally, RNA-Seq and qPCR data revealed the relevant influence of genes of the INS and RFO pathways in the S. scabra response to water deprivation. Our study deciphers the genetics and transcriptomics of the INS and RFO in S. scabra, shedding light on their importance for a Caatinga-native plant and paving the way for future biotechnological applications in this species and beyond.

18.
Plants (Basel) ; 13(13)2024 Jun 28.
Artigo em Inglês | MEDLINE | ID: mdl-38999634

RESUMO

The V-myb myeloblastosis viral oncogene homolog (MYB) family participate in various bioprocesses including development and abiotic stress responses. In the present study, we first report a 1R SHAQKYF-class MYB, MaMYBR30, in mulberry. Subcellular localization and sequence analysis indicated MaMYBR30 is located in the nucleus and belongs to a CCA-like subgroup with a conserved SHAQKYF motif. Expression profile analysis showed that MaMYBR30 is expressed in leaves and can be induced by drought and salt stress. The down-regulation of MaMYBR30 using virus-induced gene silence (VIGS) in mulberry and the overexpression of MaMYBR30 in Arabidopsis were induced to explore the function of MaMYBR30. The functional characterization of MaMYBR30 in vivo indicated that MaMYBR30 can positively regulate the resistance of mulberry to drought while negatively regulating the resistance of mulberry to salt stress. In addition, MaMYBR30 also affects flower development and reproductive growth, especially after exposure to salt stress. Weighted gene co-expression network analysis (WGCNA) primarily revealed the possible genes and signal pathways that are regulated by MaMYBR30. Our results also imply that complex molecular mechanisms mediated by MaMYBR30, including crosstalk of ion toxicity, phytohormone signal transduction, flowering development, and epigenetic modification, need to be further explored in the future.

19.
Plants (Basel) ; 13(13)2024 Jun 30.
Artigo em Inglês | MEDLINE | ID: mdl-38999648

RESUMO

Drought stress is one of the most critical threats to crop productivity and global food security. This review addresses the multiple effects of drought on the process of photosynthesis in major food crops. Affecting both light-dependent and light-independent reactions, drought leads to severe damage to photosystems and blocks the electron transport chain. Plants face a CO2 shortage provoked by stomatal closure, which triggers photorespiration; not only does it reduce carbon fixation efficiency, but it also causes lower overall photosynthetic output. Drought-induced oxidative stress generates reactive oxygen species (ROS) that damage cellular structures, including chloroplasts, further impairing photosynthetic productivity. Plants have evolved a variety of adaptive strategies to alleviate these effects. Non-photochemical quenching (NPQ) mechanisms help dissipate excess light energy as heat, protecting the photosynthetic apparatus under drought conditions. Alternative electron pathways, such as cyclical electron transmission and chloroplast respiration, maintain energy balance and prevent over-reduction of the electron transport chain. Hormones, especially abscisic acid (ABA), ethylene, and cytokinin, modulate stomatal conductance, chlorophyll content, and osmotic adjustment, further increasing the tolerance to drought. Structural adjustments, such as leaf reordering and altered root architecture, also strengthen tolerance. Understanding these complex interactions and adaptive strategies is essential for developing drought-resistant crop varieties and ensuring agricultural sustainability.

20.
Plants (Basel) ; 13(13)2024 Jul 05.
Artigo em Inglês | MEDLINE | ID: mdl-38999689

RESUMO

The low nutrient content of soil in desert ecosystems results in unique physiological and ecological characteristics of plants under long-term water and nutrient stress, which is the basis for the productivity and stability maintenance of the desert ecosystem. However, the relationship between the soil and the plant nutrient elements in the desert ecosystem and its mechanism for maintaining ecosystem stability is still unclear. In this study, 35 sampling sites were established in an area with typical desert vegetation in the Qaidam Basin, based on a drought gradient. A total of 90 soil samples and 100 plant samples were collected, and the soil's physico-chemical properties, as well as the nutrient elements in the plant leaves, were measured. Regression analysis, redundancy analysis (RDA), the Theil-Sen Median and Mann-Kendall methods, the structural equation model (SEM), and other methods were employed to analyze the distribution characteristics of the soil and plant nutrient elements along the drought gradient and the relationship between the soil and leaf nutrient elements and its impact on ecosystem stability. The results provided the following conclusions: Compared with the nutrient elements in plant leaves, the soil's nutrient elements had a more obvious regularity of distribution along the drought gradient. A strong correlation was observed between the soil and leaf nutrient elements, with soil organic carbon and alkali-hydrolyzed nitrogen identified as important factors influencing the leaf nutrient content. The SEM showed that the soil's organic carbon had a positive effect on ecosystem stability by influencing the leaf carbon, while the soil's available phosphorus and the mean annual temperature had a direct positive effect on stability, and the soil's total nitrogen had a negative effect on stability. In general, the soil nutrient content was high in areas with a low mean annual temperature and high precipitation, and the ecosystem stability in the area distribution of typical desert vegetation in the Qaidam Basin was low. These findings reveal that soil nutrients affect the stability of desert ecosystems directly or indirectly through plant nutrients in the Qaidam Basin, which is crucial for maintaining the stability of desert ecosystems with the background of climate change.

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