Stephanostomum minankisi n. sp. (Digenea: Acanthocolpidae) from dusky flounder Syacium papillosum (Paralichthydae) from southern Gulf of Mexico: A new species without spines?

A new species of the genus Stephanostomum is described for the southeastern Gulf of Mexico based on morphological and nucleotide evidence. Stephanostomum minankisi n. sp. infects the intestine of the dusky flounder Syacium papillosum in the Yucatan Continental Shelf, Mexico (Yucatan Peninsula). Sequences of the 28S ribosomal gene were obtained and compared with available sequences of the other species and genera of the families Acanthocolpidae and Brachycladiidae from GenBank. A phylogenetic analysis was conducted, including 39 sequences, 26 of which represented 21 species and six genera of the family Acanthocolpidae. The new species is characterized by the absence of circumoral spines and spines on the tegument. Nonetheless, scanning electron microscopy consistently revealed the pits of 52 circumoral spines distributed in a double row with 26 spines each, and forebody spined. Other distinctive features of this species are testes in contact (sometimes overlapping), the vitellaria running along the body lateral fields to the mid-level of the cirrus-sac, pars prostatica and ejaculatory duct similar in length, and uroproct present. The phylogenetic tree showed that the three species found as parasites of dusky flounder (the new adult species and two in metacercaria stages) were grouped into two different clades. S. minankisi n. sp. was the sister species of Stephanostomum sp. 1 (Bt = 56) and formed a clade with S. tantabiddii, supported by high bootstrap values (100).

Quantifying spatio-temporal consistency in the trophic ecology of two sympatric flatfishes.

Sympatric flatfish predators may partition their resources in coastal environments to reduce competition and maximise foraging efficiency. However, the degree of spatial and temporal consistency in their trophic ecology is not well understood because dietary studies tend to overlook the heterogeneity of consumed prey. Increasing the spatial and temporal scale of dietary analyses can thus help to resolve predator resource use. We applied a stomach content and multi-tissue (liver and muscle) stable isotope (δ13 C, δ15 N and δ34 S) approach to investigate the feeding habits of two co-occurring flatfish predators, common dab (Limanda limanda) and European plaice (Pleuronectes platessa), across four bays on the Northumberland coast (UK) over short (hours), medium (days) and long (months) temporal scales. Stomach content analyses showed spatial consistencies in predator resource use, whereas stable isotope mixing models revealed considerable inter-bay diet variability. Stomach contents also indicated high dietary overlap between L. limanda and P. platessa, while the stable isotope data yielded low to moderate levels of overlap, with cases of complete niche separation. Furthermore, individual specialisation metrics indicated consistently low levels of specialisation among conspecifics over time. We document changes in resource partitioning in space and time, reflecting diet switching in response to local and temporal fluctuations of patchily distributed prey. This study highlights how trophic tracers integrated at multiple temporal and spatial scales (within tens of kilometres) provide a more integrative approach for assessing the trophic ecology of sympatric predators in dynamic environments.

Population structure of mud flounder Paralichthys orbignyanus from the south-western Atlantic Ocean.

The mud flounder Paralichthys orbignyanus (Pleuronectiformes, Paralichthyidae) inhabits shallow waters of low salinities and mud bottoms in the temperate marine coastal regions of the Bonaerensean Ecoregion of the Argentinean Biogeographic Province in the south-western Atlantic Ocean. Specimens of P. orbignyanus were collected from Lagoa dos Patos (LDP) (southern Brazil), Mar Chiquita (MCH) and Marisol (MAR) both located in Buenos Aires (Argentina), and San Antonio Oeste (SAO) in the San Matías Gulf, Rio Negro (Argentina). A fragment of the mitochondrial DNA of the Control Region and seven microsatellite loci were characterized. In the Control Region, P. orbignyanus showed high variability, low nucleotide diversity, mild population expansion and a coalescence time of 35,000 years before the present. Flounders provided evidence of a genetic structure between the sampling sites LDP, MCH, MAR vs. SAO. On the other hand, P. orbignyanus displayed a lower to moderate contemporary genetic structure among all samples except between LDP and MCH. With no evidence of isolation by distance, this analysis supports a model of limited gene flow that is likely to be associated with a consistent larvae retention in all sampling sites. In addition, the present connectivity is ascribed to a lower migration process from SAO in the San Matías Gulf congruent with the prevailing littoral drift.

Functional Groups of Metazoan Parasites of the Dusky Flounder (Syacium papillosum) as Bioindicators of Environmental Health of the Yucatan Shelf.

We aimed to compare the percentage of explained variance given by the relationship of species and functional groups of metazoan parasites of the dusky flounder Syacium papillosum and environmental variables from water and sediments in the Yucatan shelf (YS). Parasite data were obtained from 127 S. papillosum specimens collected from 17 of 67 stations. At each station, 46 environmental variables were measured, including hydrocarbons, heavy metals, and physicochemical variables from water and sediments. Fifteen functional groups were defined based on biological characteristics of 48 parasite species. Our multivariate statistical analyses showed that species and functional groups produced similar explained variance values (47.3% and 50% respectively). However, using functional groups the time and financial resources were minimal compared with those used for morphological and molecular identification to produce the species composition matrix. Thus, functional groups are the best choice from the point of view of saving time and money.

Pattern of New Gene Origination in a Special Fish Lineage, the Flatfishes.

Origination of new genes are of inherent interest of evolutionary geneticists for decades, but few studies have addressed the general pattern in a fish lineage. Using our recent released whole genome data of flatfishes, which evolved one of the most specialized body plans in vertebrates, we identified 1541 (6.9% of the starry flounder genes) flatfish-lineage-specific genes. The origination pattern of these flatfish new genes is largely similar to those observed in other vertebrates, as shown by the proportion of DNA-mediated duplication (1317; 85.5%), RNA-mediated duplication (retrogenes; 96; 6.2%), and de novo-origination (128; 8.3%). The emergence rate of species-specific genes is 32.1 per Mya and the whole average level rate for the flatfish-lineage-specific genes is 20.9 per Mya. A large proportion (31.4%) of these new genes have been subjected to selection, in contrast to the 4.0% in primates, while the old genes remain quite similar (66.4% vs. 65.0%). In addition, most of these new genes (70.8%) are found to be expressed, indicating their functionality. This study not only presents one example of systematic new gene identification in a teleost taxon based on comprehensive phylogenomic data, but also shows that new genes may play roles in body planning.

Systematic revision of the flatfish genus Peltorhamphus Günther, 1862 (Teleostei: Pleuronectiformes: Rhombosoleidae), including description of a new species from Southeastern New Zealand, with biological and ecological summaries for the species.

The flatfish genus Peltorhamphus Günther, 1862 (Pleuronectiformes: Rhombosoleidae) and its constituent species are redescribed based on examination of 1885 specimens. Four species are considered valid: three previously described (P. novaezeelandiae Günther, 1862, P. latus James, 1972, and P. tenuis James, 1972) and P. kryptostomus n. sp., described herein. Peltorhamphus novaezeelandiae, P. latus, and P. tenuis have widespread distributions on soft sediments in shallow coastal and inner continental shelf waters off both islands of New Zealand. Peltorhamphus novaezeelandiae has also been reported at the Chatham Islands. Previous reports of P. novaezeelandiae from Norfolk Island are erroneous. Peltorhamphus kryptostomus n. sp. has the most restricted geographic distribution in shallow coastal waters of the Otago-Southland region along the southeastern coast of South Island. The four species of Peltorhamphus are morphologically similar and overlap in many traditional meristic and morphometric features rendering identifications difficult, especially of juveniles and earlier life-history stages. Furthermore, throughout New Zealand waters, as many as three of the species possibly occur sympatrically, while in inshore areas of southeastern South Island, all four species may occur in sympatry. Novel morphological characters discovered in this study, combined with traditional diagnostic characters were used to identify and diagnose the species. Peltorhamphus tenuis is the most distinctive of the four, differing from congeners in the following combination of characters: greater length of second ocular-side pectoral-fin ray; its higher numbers of dorsal- and anal-fin rays and total vertebrae; having a series of small scales (best developed in specimens >70 mm SL) on blind sides of dorsal- and anal-fin rays (scales absent in congeners); its elongate body; and ocular-side pigmentation. The other three species are more similar morphologically and have frequently been misidentified both in fish collections and in some previous literature on these fishes. Of these three, P. novaezeelandiae, the largest in the genus, is distinguished from congeners by the combination of: its large size (reaching 510 mm SL vs. ≤ 200 mm SL); rounded head shape; blind-side squamation; the second ocular-side pectoral-fin ray shorter than body depth; ontogenetic variation in interorbital width; greater distance (4-8 scales wide) between ventral margin of lower eye and dorsal (upper) margin of rostral hood above the mouth; and 2-6 fleshy, finger-like filaments on the inner anteroventral margin of the fleshy skinfold on the ocular-side lower jaw. Peltorhamphus latus differs from congeners by the combination of: its short (maximum 150 mm SL), relatively deep body and bluntly pointed snout; blind-side squamation; relatively long, robust gillrakers on first gill arch, with upper limb gillrakers long, but not usually overlapping tips of dorsalmost gillrakers on the lower limb; black pigment on entire roof of mouth; relatively large eyes and narrow interorbital width (without significant ontogenetic variation); short diagonal distance (usually 2-3 scales wide) between ventral margin of lower eye and dorsal (upper) margin of rostral hood above the mouth; and absence of finger-like filaments on the inner anteroventral margin of the fleshy skinfold on the ocular-side lower jaw. Peltorhamphus kryptostomus n. sp. is distinguished from congeners by the combination of: its deep body and smoothly rounded snout; blind-side squamation; long, robust gillrakers on the first gill arch, with some posterior gillrakers on the upper limb overlapping tips of the first and second dorsalmost gillrakers on the lower limb; black pigment on the entire roof of the mouth; relatively large eyes and relatively narrow interorbital width; wide distance between ventral margin of lower eye and upper margin of rostral hood (3-6, usually 4-5, scales wide); and 1-4 finger-like filaments on the inner anteroventral margin of the fleshy skinfold on the ocular-side lower jaw. Ecological and life-history information are summarized for each species, and a key to juveniles > 40 mm SL and adults is also provided. Re-assessment of the number of valid species of Peltorhamphus provides better understanding of species diversity within this genus and within the Rhombosoleidae, as well as that for the flatfish assemblage residing in New Zealand waters.

Annotated catalogue of type specimens of flatfishes (Osteichthyes: Pleuronectiformes) in the Zoological Institute, St. Petersburg, Russia.

A complete catalogue is provided for the type specimens of flatfishes curated in the ichthyological collection of the Zoological Institute, St. Petersburg. The collection contains a total of 138 type specimens, representing 25 species and one subspecies of eight different flatfish families. The catalogue includes: photographs of type specimens, radiographs of holotypes or largest syntypes, number of specimens, original sampling data (locality, coordinates, depth, collection date and collector), and select morphometric characters for each specimen.

Use of a species-rich and highly eutrophic tropical estuary in the South Atlantic by Pleuronectiformes (Teleostei: Acanthopterygii) / Uso de um estuário tropical rico em espécies e altamente eutrofizado no Atlântico Sul por Pleuronectiformes (Teleostei: Acanthopterygii)

Abstract: A total of 1,471 specimens of 16 species of flatfishes (Pleuronectiformes) were caught during 48 sampling campaigns between July 2005 and June 2007 at ten stations in Guanabara Bay, Rio de Janeiro, Brazil. Paralichthyidae was the dominant family, with Etropus crossotus as the dominant species. The outer stations, especially those on the western side of the lower estuary, were distinguished as a result of their higher abundance of flatfishes and number of species. The spatial distribution of E. crossotus and its population structure indicate that this species is an estuarine resident despite the apparent reduction in its area of occupation within the estuarine complex. Among the other species, nine were classified as marine stragglers (Achirus declivis, Bothus ocellatus, Cyclopsetta chittendeni, Etropus longimanus, Paralichthys orbignyanus, P. patagonicus, Syacium micrurum, Symphurus diomedeanus and Trinectes paulistanus) and three as estuarine opportunists (Bothus robinsi, Citharichthys macrops and Syacium papillosum); another three could not be classified due to the small number of captures or lack of previous data (S. tessellatus, A. lineatus and C. spilopterus).

Resumo: Um total de 1.471 espécimes de 16 espécies de linguados (Pleuronectiformes) foram capturados durante 48 campanhas de amostragem entre julho de 2005 e junho de 2007 em dez estações na Baía de Guanabara, Rio de Janeiro, Brasil. Paralichthyidae foi a família dominante, com Etropus crossotus como a espécie dominante. As estações externas, especialmente aquelas no lado ocidental do baixo estuário, foram distinguidas como resultado de sua maior abundância de linguados e número de espécies. A distribuição espacial de E. crossotus e sua estrutura populacional indicam que esta espécie é uma residente estuarina, apesar da aparente redução em sua área de ocupação dentro do complexo estuarino. Dentre as outras espécies, nove foram classificadas como migrantes marinhos (Achirus declivis, Bothus ocellatus, Cyclopsetta chittendeni, Etropus longimanus, Paralichthys orbignyanus, P. patagonicus, Syacium micrurum, Symphurus diomedeanus e Trinectes paulistanus) e três como oportunistas estuarinos (Bothus robinsi, Citharichthys macrops e Syacium papillosum); outras três não puderam ser classificados devido ao pequeno número de capturas ou falta de dados prévios (S. tessellatus, A. lineatus e C. spilopterus).

External morphology, postcranial and appendicular osteology of three southwestern Atlantic flatfishes ( Paralichthys, Paralichthyidae), and comparisons with other congeneric species

Comparisons of the external morphology and analysis of osteological features of the postcranial and appendicular skeletons of three southwestern Atlantic flatfish species of the genus Paralichthys (P. isosceles, P. orbignyanus and P. patagonicus) were carried out. Bones are described, and detailed morphological, morphometric and meristic characteristics of these flounders are given in order to provide information about the external and internal morphology of three species of Paralichthys occurring in the south-west Atlantic waters that add new information and will help regarding within the framework of a phylogenetic study of the group. Interspecific differences were found in the number of vertebrae and intermuscular bones, as well as in the morphology and morphometry of vertebrae, caudal skeletons, pectoral and pelvic girdle bones. Relationships between bones are discussed and bone characteristics compared with those found in other species of Paralichthys and in other pleuronectiform species. The position of Paralichthys isosceles within Paralichthys is discussed, along with other congeners such as P. triocellatus and P. oblongus.(AU)

Se llevaron a cabo comparaciones de la morfología externa y el análisis de las características osteológicas de los esqueletos postcraneal y apendicular de tres especies de peces planos del Atlántico sudoccidental del género Paralichthys (P. isosceles, P. orbignyanus y P. patagonicus). Se describen los huesos, y se proporcionan características morfológicas, morfométricas y merísticas detalladas de estos lenguados con el fin de aportar información sobre la morfología externa e interna de tres especies de Paralichthys presentes en el Atlántico sudoccidental. Esta nueva información contribuirá al marco de un estudio filogenético del grupo. Se encontraron diferencias interespecíficas en el número de vértebras y huesos intermusculares, así como en la morfología y morfometría de las vértebras, los esqueletos caudales, los huesos de las cinturas pectoral y pélvica. Se discuten las relaciones entre los huesos y las características óseas en comparación con las encontradas en otras especies de Paralichthys y de otros Pleuronectiformes. Se discute la posición de Paralichthys isosceles dentro del género Paralichthys, junto con otros congéneres como P. oblongus y P. triocellatus.(AU)

Phylogenetic analysis of the order Pleuronectiformes (Teleostei) based on sequences of 12S and 16S mitochondrial genes

The fish order Pleuronectiformes, composed of 14 families, has two suborders: Psettodoidei (with one family) and Pleuronectoidei (with thirteen families). The relationships among families of Pleuronectoidei and among the genera of their families have extensively been debated and a consensus has not yet been reached. In the present study, partial sequences of the 12S and 16S mitochondrial rRNA genes were obtained from 19 species belonging to the families Achiridae, Bothidae, Cynoglossidae, Paralichthyidae, Pleuronectidae, Scophthalmidae, and Soleidae. Additional sequences of 42 pleuronectiform species were obtained from GenBank. Phylogenetic analyses were conducted by the methods of maximum-parsimony, maximum-likelihood and Bayesian inference. Our results corroborate the monophyletic status of all families, excluding Paralichthyidae. In the family Achiridae, the genus Catathyridium (freshwater) was the sister group of Trinectes (saltwater), and Hypoclinemus (freshwater) was the sister group of Achirus (saltwater). Assuming that the putative ancestor of achirids lived in saltwater, it is suggested that the freshwater habitats in South America were colonized independently by different achirid lineages.