Untangling the complex food webs of tropical rainforest streams.

Food webs depict the tangled web of trophic interactions associated with the functioning of an ecosystem. Understanding the mechanisms providing stability to these food webs is therefore vital for conservation efforts and the management of natural systems. Here, we first characterised a tropical stream meta-food web and five individual food webs using a Bayesian Hierarchical approach unifying three sources of information (gut content analysis, literature compilation and stable isotope data). With data on population-level biomass and individually measured body mass, we applied a bioenergetic model and assessed food web stability using a Lotka-Volterra system of equations. We then assessed the resilience of the system to individual species extinctions using simulations and investigated the network patterns associated with systems with higher stability. The model resulted in a stable meta-food web with 307 links among the 61 components. At the regional scale, 70% of the total energy flow occurred through a set of 10 taxa with large variation in body masses. The remaining 30% of total energy flow relied on 48 different taxa, supporting a significant dependency on a diverse community. The meta-food web was stable against individual species extinctions, with a higher resilience in food webs harbouring omnivorous fish species able to connect multiple food web compartments via weak, non-specialised interactions. Moreover, these fish species contributed largely to the spatial variation among individual food webs, suggesting that these species could operate as mobile predators connecting different streams and stabilising variability at the regional scale. Our results outline two key mechanisms of food web stability operating in tropical streams: (i) the diversity of species and body masses buffering against random and size-dependent disturbances and (ii) high regional diversity and weak omnivorous interactions of predators buffering against local stochastic variation in species composition. These mechanisms rely on high local and regional biodiversity in tropical streams, which is known to be strongly affected by human impacts. Therefore, an urgent challenge is to understand how the ongoing systematic loss of diversity jeopardises the stability of stream food webs in human-impacted landscapes.

As teias alimentares representam um emaranhado de interações tróficas associadas ao funcionamento de um ecossistema. Compreender os mecanismos que proporcionam estabilidade a estas teias alimentares é, portanto, vital para os esforços de conservação e gestão dos sistemas naturais. Aqui, primeiro caracterizamos uma meta teia alimentar de riachos tropicais e cinco teias alimentares individuais usando uma abordagem hierárquica Bayesiana unificando três fontes de informação (análise de conteúdo estomacal, compilação de literatura, dados de isótopos estáveis). Com dados sobre biomassa em nível populacional e massa corporal medida individualmente, aplicamos um modelo bioenergético e avaliamos a estabilidade da cadeia alimentar usando um sistema de equações Lotka­Volterra. Em seguida, avaliamos a resiliência do sistema às extinções de espécies individuais usando simulações e investigamos os padrões de rede associados a sistemas com maior estabilidade. O modelo resultou em uma meta teia alimentar estável com 307 ligações entre os 61 componentes. Na escala regional, 70% do fluxo total de energia ocorreu através de um conjunto de dez taxa com grande variação nas massas corporais. Os restantes 30% do fluxo total de energia dependiam de 47 taxa diferentes, apoiando uma dependência significativa de uma comunidade diversificada. A meta teia alimentar foi estável contra extinções de espécies individuais, com uma maior resiliência em teias alimentares que abrigam espécies de peixes onívoros capazes de conectar múltiplos compartimentos da teia alimentar através de interações fracas e não especializadas. Além disso, estas espécies de peixes contribuíram amplamente para a variação espacial entre as cadeias alimentares individuais, sugerindo que estas espécies poderiam operar como predadores móveis conectando diferentes riachos e estabilizando a variabilidade à escala regional. Nossos resultados descrevem dois mecanismos principais de estabilidade da cadeia alimentar operando em riachos tropicais: (i) a diversidade de espécies e massas corporais que protegem contra distúrbios aleatórios e dependentes do tamanho (ii) alta diversidade regional e fracas interações onívoras de predadores que protegem contra a variação estocástica local na composição de espécies. Estes mecanismos dependem de uma elevada biodiversidade local e regional em riachos tropicais, que são conhecidos por serem fortemente afetados pelos impactos humanos. Portanto, um desafio urgente é compreender como a contínua perda sistemática de diversidade põe em risco a estabilidade das teias alimentares em paisagens impactadas pelo homem.

The reorganization of predator-prey networks over 20 million years explains extinction patterns of mammalian carnivores.

Linking the species interactions occurring at the scale of local communities to their potential impact at evolutionary timescales is challenging. Here, we used the high-resolution fossil record of mammals from the Iberian Peninsula to reconstruct a timeseries of trophic networks spanning more than 20 million years and asked whether predator-prey interactions affected regional extinction patterns. We found that, despite small changes in species richness, trophic networks showed long-term trends, gradually losing interactions and becoming sparser towards the present. This restructuring of the ecological networks was driven by the loss of medium-sized herbivores, which reduced prey availability for predators. The decrease in prey availability was associated with predator longevity, such that predators with less available prey had greater extinction risk. These results not only reveal long-term trends in network structure but suggest that prey species richness in ecological communities may shape large scale patterns of extinction and persistence among predators.

Biological invasions alter the structure of a tropical freshwater food web.

Biological invasions are expected to alter food web structure, but there are limited empirical data directly comparing invaded versus uninvaded food webs, particularly in species-rich, tropical systems. We characterize for the first time the food web of Lake Gatun-a diverse and highly invaded tropical freshwater lake within the Panama Canal. We used stable isotope analysis to reconstruct the trophic structure of the fish community of Lake Gatun and to compare it to that of a minimally invaded reference lake, Lake Bayano. We found significant differences between the trophic structures of these two Neotropical lakes, notably that Lake Gatun's fish community was characterized by a longer food chain, greater isotopic diversity, a broader range of trophic positions and body sizes, and shifts in the isotopic positions of several native taxa relative to Lake Bayano. The degree of isotopic overlap between native and non-native trophic guilds in Lake Gatun was variable, with herbivores exhibiting the lowest (20%-29%) overlap and carnivores the greatest (81%-100%). Overall, our results provide some of the first empirical evidence for the ways in which multiple introduced and native species may partition isotopic space in a species-rich tropical freshwater food web.

Can the stable isotope variability in a zooplankton time series be explained by its key species?

Stable isotope (SI) analysis is a standard tool to study marine food webs, usually based on the measurement of a few individuals from a small list of subjectively pre-defined species. The main objective of this study was to find out which species are significantly associated with the temporal variability of the SI composition of zooplankton in a tropical marine ecosystem. We investigated this by means of a novel species-biomass-isotopes-mixture (SBIM) approach that uses a relative biomass matrix to explain the SI signature of the zooplankton community. Furthermore, SBIM was applied to detect key taxa that can be considered bioindicators for important descriptors of ecosystem state (e.g., oligotrophy, carbon sources, mean trophic level). Plankton samples (64 µm mesh size) were obtained in Tamandaré Bay (northeastern Brazil) from June 2013 to August 2019. One aliquot of each sample was taken for stable isotope measurements and one for taxonomic identification and estimation of size and relative biomass. Total zooplankton biomass differed significantly between years, seasons and stations. Total zooplankton δ13C values ranged from -21.0 to -18.2‰ (mean ± standard deviation: -19.7 ± 0.7‰ in the dry season, and -19.4 ± 0.8‰ in the rainy season). Total zooplankton δ15N values ranged from 3.8 to 9.0‰ (7.0 ± 1.0‰ in the dry season, and 6.5 ± 1.2‰ rainy season). Total zooplankton C/N ratios ranged from 3.5 to 5.0 (4.2 ± 0.4 in the dry season and 4.2 ± 0.3 in the rainy season). The sparsely abundant and relatively large-sized copepod Pseudodiaptomus acutus was the most important species for explaining the variability in δ15N (22% of the total variability). Relative biomass (%) of P. acutus showed a strong positive correlation with δ15N, indicating a high trophic level (TL). Our results highlight the importance of less abundant taxa for marine food webs. Small-sized invertebrate larvae were negatively correlated with δ15N, indicating a TL below average. The copepod Dioithona oculata was the most important organism in explaining the δ13C of zooplankton (17.7% of the total variability, positive correlation with δ13C), indicating possible selective use of a13C-enriched food source (e.g., diatoms) by this cyclopoid copepod. Oithona spp. juveniles showed a negative relationship with zooplankton C/N ratio, which can be indicators of an oligotrophic ecosystem state and lipid-poor zooplankton. The tintinnid F. ehrenbergii showed a positive correlation with C/N, being an indicator for turbid "green waters'', during the rainy season, when the ecosystem was in a eutrophic state, with high lipid contents in the zooplankton community. The proposed SBIM approach opens up a novel pathway to understanding the factors and species that shape the temporal variability of food webs.

Environmental fate of chlordecone in coastal habitats: recent studies conducted in Guadeloupe and Martinique (Lesser Antilles).

The organochlorine pollution by chlordecone, an insecticide spread in the past in banana plantations, is now recognized as a major ecological, economic, and social crisis in Guadeloupe and Martinique Islands. Due to its physical and chemical properties, this molecule is particularly persistent in the natural environment. Volcanic soil of Guadeloupe and Martinique contain allophanes (amorphous clays), which favor chlordecone trapping due to their structure and physical properties. Thus, with this trapping ability, allophanes serve as a vector allowing chlordecone to contaminate runoff waters and, finally, the sea. In the present publication, several studies recently conducted in the Lesser Antilles have been compiled in order to evaluate the desorption of chlordecone from allophanes when arriving in the estuarine environment and to determine the transfer of chlordecone along marine trophic food webs. The experiments showed that 20% of the initial quantity of chlordecone was released from allophanes in estuarine conditions and 10% in the marine environment. These results could explain the high level of contamination found in the suspended organic matter and zooplankton in the coastal areas located downstream of the contaminated watersheds. The contamination of the marine food webs of mangroves, seagrass beds, and coral reefs is dominated by a contamination "by bath" in littoral waters containing chlordecone and by bioamplification seawards.

Drivers of biomagnification of Hg, As and Se in aquatic food webs: A review.

Biomagnification of trace elements is increasingly evident in aquatic ecosystems. In this review we investigate the drivers of biomagnification of mercury (Hg), arsenic (As) and selenium (Se) in aquatic food webs. Despite Hg, As and Se biomagnify in food webs, the biomagnification potential of Hg is much higher than that of As and Se. The slope of trophic increase of Hg is consistent between temperate (0.20), tropical (0.22) and Arctic (0.22) ecosystems. Se exerts a mitigating role against Hg toxicity but desired maximum and minimum concentrations are unknown. Environmental (e.g. latitude, temperature and physicochemical characteristics) and ecological factors (e.g. trophic structure composition and food zone) can substantially influence the biomagnification process these metal (oids). Besides the level of bioaccumulated concentration, biomagnification depends on the biology, ecology and physiology of the organisms that play a key role in this process. However, it may be necessary to determine strictly biological, physiological and environmental factors that could modulate the concentrations of As and Se in particular. The information presented here should provide clues for research that include under-researched variables. Finally, we suggest that biomagnification be incorporated into environmental management policies, mainly in risk assessment, monitoring and environmental protection methods.

Next-Generation Sequencing and Its Impacts on Entomological Research in Ecology and Evolution.

The advent of NGS-based methods has been profoundly transforming entomological research. Through continual development and improvement of different methods and sequencing platforms, NGS has promoted mass elucidation of partial or whole genetic materials associated with beneficial insects, pests (of agriculture, forestry and animal, and human health), and species of conservation concern, helping to unravel ecological and evolutionary mechanisms and characterizing survival, trophic interactions, and dispersal. It is shifting the scale of biodiversity and environmental analyses from individuals and biodiversity indicator species to the large-scale study of communities and ecosystems using bulk samples of species or a mixed "soup" of environmental DNA. As the NGS-based methods have become more affordable, complexity demystified, and specificity and sensitivity proven, their use in entomological research has spread widely. This article presents several examples on how NGS-based methods have been used in entomology to provide incentives to apply them when appropriate and to open our minds to the expected advances in entomology that are yet to come.

Macro and mesofauna soil food webs in two temperate grasslands: responses to forestation with Eucalyptus.

We studied the effects of land use change from grassland to Eucalyptus spp. plantation on macro and mesofauna soil food webs in two sites in the Rolling Pampas. We expected to find differences in the parameters that characterize the structure of soil food webs, as the implantation of Eucalyptus implies changes in the characteristics of the resources and the microhabitat conditions. We also expected to find differences in the communities in terms of diversity, abundance, and species present. The treatments were: grasslands; 10-year-old Eucalyptus plantations and 20-year-old Eucalyptus plantations. Seasonal samplings were performed for the extraction of soil fauna in winter, spring, summer and autumn. For the analysis of food webs, we worked with "trophic species'': groups of organisms that have the same prey and the same predators. A total of 25 food webs were laid out using bibliographical information of feeding habits from the identified taxa. From each food web, we obtained a predator overlap graph, in which the consumers that share the same source or prey are linked by an arrow. In addition, the Shannon-Wiener index was calculated. We found that trophic species densities were different among the treatments: communities from grassland and the younger plantations were dominated by earthworms and other secondary decomposers, while the community in the older plantation showed a greater contribution of primary decomposers (Shymphyla, Isopoda and Diplopoda). No significant differences between treatments were found in the parameters that characterize the structure of soil food webs, i.e. connections number, number of trophic species nor connectivity. However, the diversity of the community was lower in the youngest plantations than in the other treatments, and it shows evidence of compartmentalization in the predator overlap graphs. Our findings suggest that the meso and macrofauna communities in the 10-years-old plantations represent a transition between the communities from grasslands and the oldest plantations. We conclude that the effects of forestation with Eucalyptus on soil fauna communities are evident through changes in functional groups rather than changes in the parameters that characterize the structure of soil food webs.

Geographical variation of multiplex ecological networks in marine intertidal communities.

Understanding the drivers of geographical variation in species distributions, and the resulting community structure, constitutes one of the grandest challenges in ecology. Geographical patterns of species richness and composition have been relatively well studied. Less is known about how the entire set of trophic and non-trophic ecological interactions, and the complex networks that they create by gluing species together in complex communities, change across geographical extents. Here, we compiled data of species composition and three types of ecological interactions occurring between species in rocky intertidal communities across a large spatial extent (~970 km of shoreline) of central Chile, and analyzed the geographical variability in these multiplex networks (i.e., comprising several interaction types) of ecological interactions. We calculated nine network summary statistics common across interaction types, and additional network attributes specific to each of the different types of interactions. We then investigated potential environmental drivers of this multivariate network organization. These included variation in sea surface temperature and coastal upwelling, the main drivers of productivity in nearshore waters. Our results suggest that structural properties of multiplex ecological networks are affected by local species richness and modulated by factors influencing productivity and environmental predictability. Our results show that non-trophic negative interactions are more sensitive to spatially structured temporal environmental variation than feeding relationships, with non-trophic positive interactions being the least labile to it. We also show that environmental effects are partly mediated through changes in species richness and partly through direct influences on species interactions, probably associated to changes in environmental predictability and to bottom-up nutrient availability. Our findings highlight the need for a comprehensive picture of ecological interactions and their geographical variability if we are to predict potential effects of environmental changes on ecological communities.

Key prey indicates high resilience on marine soft bottom habitats.

The key prey was determined based on the diet and spatial patterns of the Nektonic community in southern Brazil. The proposed tool to discriminate key prey was based on simple probabilistic methods and analytical procedures that integrate freely available software on the web. To avoid using arbitrary criteria in key prey determination it was used an indicator based on an adapted outlier analysis including a run of principal component analysis (PCA) and then the choice of prey that fall out of the 99% concentration ellipse. The results showed three key prey identified at species level: the shrimp Artemesia longinaris in the coastal habitats and euphausid Euphausia similis and anchovy Engraulis anchoita in the continental shelf habitats (warm and cold). The analysis of the diets of the indicator species of three necktonic assemblages showed that all of them had both pelagic and detritus as primary sources of energy. However, in shallow coastal waters prevailed access to benthic food web key prey. In deeper areas, the Warm shelf assemblage accessed more evenly the epifauna, infauna and the pelagic compartments, while the Cold shelf assemblage was more dependent on planktonic production and had a prevalence of pelagic key prey. Is demonstrated the importance of the identification of key prey, since it may indicate greater or lesser stability of predator populations depending on whether they come from compartments with more or less dynamic primary production processes, including climate-related changes that may affect the predator prey interactions. This study confirmed the prediction that demersal nekton has high disturbance recovery capacity, which may mask for decades the growing impact of fishing.

A New Method to Reconstruct Quantitative Food Webs and Nutrient Flows from Isotope Tracer Addition Experiments.

Understanding how nutrients flow through food webs is central in ecosystem ecology. Tracer addition experiments are powerful tools to reconstruct nutrient flows by adding an isotopically enriched element into an ecosystem and tracking its fate through time. Historically, the design and analysis of tracer studies have varied widely, ranging from descriptive studies to modeling approaches of varying complexity. Increasingly, isotope tracer data are being used to compare ecosystems and analyze experimental manipulations. Currently, a formal statistical framework for analyzing such experiments is lacking, making it impossible to calculate the estimation errors associated with the model fit, the interdependence of compartments, and the uncertainty in the diet of consumers. In this article we develop a method based on Bayesian hidden Markov models and apply it to the analysis of N15-NH4+ tracer additions in two Trinidadian streams in which light was experimentally manipulated. Through this case study, we illustrate how to estimate N fluxes between ecosystem compartments, turnover rates of N within those compartments, and the associated uncertainty. We also show how the method can be used to compare alternative models of food web structure, calculate the error around derived parameters, and make statistical comparisons between sites or treatments.

Concentration and Trophic Transfer of Copper, Selenium, and Zinc in Marine Species of the Chilean Patagonia and the Antarctic Peninsula Area.

Patagonia and Antarctica are biodiverse regions in the Southern Hemisphere, but little is known about the levels of trace elements in marine organisms from these remote coastal ecosystems. In this study, selenium (Se), copper (Cu), zinc (Zn), and stable isotopes of nitrogen (δ15N; relative trophic level) were measured in 36 marine species collected from two locations of the Chilean Patagonia and two locations of the Antarctic Peninsula area to determine whether biomagnification of these trace elements occurs in the food webs. Results indicated that Cu, Se, and Zn levels were slightly lower than those in similar species from elsewhere, and the highest metal levels were found in marine macroinvertebrates compared with fishes. There was evidence of Cu, Se, and Zn biomagnification but only within the lower-trophic-level organisms. When assessing whole food webs, levels of these elements typically decreased from macroinvertebrates to fishes or birds, suggesting lower risks of metal toxicity to higher-level consumers.

First study of food webs in a large glacial river: the trophic role of invasive trout

The aim of this study was to determine the food webs structure of a large Patagonian river in two river sections (Upstream and Midstream) and to evaluate isotopic overlap between native and introduced species. We used stable isotope analyses of δ15N and δ13C and stomach content. The Upstream section had a more complex food webs structure with a greater richness of macroinvertebrates and fish species than Midstream. Upstream basal resources were dominated by filamentous algae. Lake Trout were found to have a higher trophic position than all other fish species in that area although, the most abundant fish species, were Rainbow Trout. Depending on the life stage, Rainbow Trout shifted from prey to competitor/predator. In the Midstream section, the base of the food webs was dominated by coarse particulate organic matter, and adult Rainbow Trout had the highest trophic level. Isotopic values changed among macroinvertebrates and fish for both areas. The two most abundant native and invasive species — Puyen and Rainbow Trout — showed an isotopic separation in Midstream but did not in Upstream areas. The presence of invasive fish that occupy top trophic levels can have a significant impact on native fish populations that have great ecological importance in the region.(AU)

El objetivo de este estudio fue determinar la estructura trófica de un gran río de la Patagonia en dos secciones (río arriba y medio) y evaluar la superposición isotópica entre especies nativas e introducidas. Utilizamos análisis de isótopos estables δ15N y δ13C y contenido estomacal. La sección río arriba tuvo una estructura de trama trófica más compleja, con mayor riqueza de macroinvertebrados y peces respecto de la sección media. Los recursos basales dominantes río arriba fueron las algas filamentosas. En esta área, la trucha de lago tuvo la posición trófica más alta entre los peces, aunque, las especies de peces más abundantes fueron las truchas arcoiris. Dependiendo del estadio, la trucha arcoiris cambió su rol de presa a competidor/depredador. En la sección media del río, la base de la trama trófica estuvo dominada por materia orgánica particulada gruesa y la trucha arcoíris adulta fue el depredador tope. Los valores isotópicos variaron entre zonas para invetebrados y peces. Las dos especies nativas e invasoras más abundantes, Puyen y trucha arcoiris, mostraron una separación isotópica en la sección media, pero no en secciones de río arriba. La presencia de peces invasores que ocupan una posición tope en los niveles tróficos puede tener un impacto significativo sobre las poblaciones de peces nativos de gran importancia ecológica en la región.(AU)

First study of food webs in a large glacial river: the trophic role of invasive trout

The aim of this study was to determine the food webs structure of a large Patagonian river in two river sections (Upstream and Midstream) and to evaluate isotopic overlap between native and introduced species. We used stable isotope analyses of δ15N and δ13C and stomach content. The Upstream section had a more complex food webs structure with a greater richness of macroinvertebrates and fish species than Midstream. Upstream basal resources were dominated by filamentous algae. Lake Trout were found to have a higher trophic position than all other fish species in that area although, the most abundant fish species, were Rainbow Trout. Depending on the life stage, Rainbow Trout shifted from prey to competitor/predator. In the Midstream section, the base of the food webs was dominated by coarse particulate organic matter, and adult Rainbow Trout had the highest trophic level. Isotopic values changed among macroinvertebrates and fish for both areas. The two most abundant native and invasive species — Puyen and Rainbow Trout — showed an isotopic separation in Midstream but did not in Upstream areas. The presence of invasive fish that occupy top trophic levels can have a significant impact on native fish populations that have great ecological importance in the region.(AU)

El objetivo de este estudio fue determinar la estructura trófica de un gran río de la Patagonia en dos secciones (río arriba y medio) y evaluar la superposición isotópica entre especies nativas e introducidas. Utilizamos análisis de isótopos estables δ15N y δ13C y contenido estomacal. La sección río arriba tuvo una estructura de trama trófica más compleja, con mayor riqueza de macroinvertebrados y peces respecto de la sección media. Los recursos basales dominantes río arriba fueron las algas filamentosas. En esta área, la trucha de lago tuvo la posición trófica más alta entre los peces, aunque, las especies de peces más abundantes fueron las truchas arcoiris. Dependiendo del estadio, la trucha arcoiris cambió su rol de presa a competidor/depredador. En la sección media del río, la base de la trama trófica estuvo dominada por materia orgánica particulada gruesa y la trucha arcoíris adulta fue el depredador tope. Los valores isotópicos variaron entre zonas para invetebrados y peces. Las dos especies nativas e invasoras más abundantes, Puyen y trucha arcoiris, mostraron una separación isotópica en la sección media, pero no en secciones de río arriba. La presencia de peces invasores que ocupan una posición tope en los niveles tróficos puede tener un impacto significativo sobre las poblaciones de peces nativos de gran importancia ecológica en la región.(AU)

Multi-species okadaic acid contamination and human poisoning during a massive bloom of Dinophysis acuminata complex in southern Brazil.

On June 2016, a major bloom of Dinophysis acuminata complex was noticed over the coast of Paraná State (PR), southern Brazil, an area unprotected by any official monitoring program. Here we report the results of an extensive sampling effort that ultimately led PR authorities to issue the first State shellfish-harvesting ban due to multi-species okadaic acid (OA) contamination. During its peak, the bloom covered an area of 201 km2 (∼2.0-3.5 × 54.0 km), attaining unprecedentedly high cell densities along the shallow (<15 m) continental shelf (mean 2.2 × 105, maximum 2.1 × 106 cells L-1) and adjacent sandy beaches (mean 2.8 × 105, maximum 5.2 × 106 cells L-1). Only OA was detected in suspension (max. 188 ng L-1). Toxin levels measured in bivalves were several times greater than the regulatory limit of 160 ng g-1, reaching up to 3600 ng g-1 in Crassostrea gasar, by far the highest OA concentrations ever reported in oysters worldwide, 7700 ng g-1 in brown mussels, Perna perna, and lower levels in clams, Anomalocardia brasiliana, and mangrove mussels, Mytella spp. Nine cases of human intoxication were officially reported and five people were hospitalized with typical symptoms of Diarrhetic Shellfish Poisoning linked to the consumption of contaminated bivalves. All bivalves quickly converted most of the OA into its esterified form, DTX-3, and eliminated the toxins only a few weeks following the bloom, with C. gasar being the slowest-detoxifying species. Lower OA levels were accumulated in zooplankton, gastropods and several novel toxin vectors, including benthic organisms such as sand dollars Mellita quinquiesperforata and the ghost-shrimp Callichirus major, which may act as a good indicator of the presence of toxins in sandy beaches, and pelagic fish species that can serve as potential alternative sources of OA to humans (Chaetodipterus faber and Mugil liza). Monitoring toxin contamination in seafood other than bivalves is thus recommended to ensure comprehensive human health protection during massive Dinophysis blooms. Additionally, since OA was also present at low concentrations in the liver of Guiana dolphins Sotalia guianensis and penguins Spheniscus magellanicus, exposure to biotoxins should be considered in conservation actions involving threatened and near-threatened marine organisms in this region.

Revealing biases in the sampling of ecological interaction networks.

The structure of ecological interactions is commonly understood through analyses of interaction networks. However, these analyses may be sensitive to sampling biases with respect to both the interactors (the nodes of the network) and interactions (the links between nodes), because the detectability of species and their interactions is highly heterogeneous. These ecological and statistical issues directly affect ecologists' abilities to accurately construct ecological networks. However, statistical biases introduced by sampling are difficult to quantify in the absence of full knowledge of the underlying ecological network's structure. To explore properties of large-scale ecological networks, we developed the software EcoNetGen, which constructs and samples networks with predetermined topologies. These networks may represent a wide variety of communities that vary in size and types of ecological interactions. We sampled these networks with different mathematical sampling designs that correspond to methods used in field observations. The observed networks generated by each sampling process were then analyzed with respect to the number of components, size of components and other network metrics. We show that the sampling effort needed to estimate underlying network properties depends strongly both on the sampling design and on the underlying network topology. In particular, networks with random or scale-free modules require more complete sampling to reveal their structure, compared to networks whose modules are nested or bipartite. Overall, modules with nested structure were the easiest to detect, regardless of the sampling design used. Sampling a network starting with any species that had a high degree (e.g., abundant generalist species) was consistently found to be the most accurate strategy to estimate network structure. Because high-degree species tend to be generalists, abundant in natural communities relative to specialists, and connected to each other, sampling by degree may therefore be common but unintentional in empirical sampling of networks. Conversely, sampling according to module (representing different interaction types or taxa) results in a rather complete view of certain modules, but fails to provide a complete picture of the underlying network. To reduce biases introduced by sampling methods, we recommend that these findings be incorporated into field design considerations for projects aiming to characterize large species interaction networks.

Nutritional stress by means of high C:N ratios in the diet and starvation affects nitrogen isotope ratios and trophic fractionation of omnivorous copepods.

Nutritional stress, from feeding on low-quality diets or starvation, may cause changes in consumers' nitrogen isotope ratios (δ15N = 15N/14N) and trophic fractionation (∆15N = δ15Nconsumer - δ15Nfood source), however, research has shown mixed results in the magnitude and the direction of the change. This is potentially more complex for omnivores whose diets span a wide range of food resources. We conducted seasonal field samplings in Patagonian lakes and analyzed the relationship between seston (SES) quality parameters and the δ15N and ∆15N of an omnivorous copepod, Boeckella gracilipes (Bg). We also performed a 7-day laboratory starvation experiment, an extreme form of nutritional stress, to investigate if lack of food led to changes in δ15NBg values. Our field results showed that increasing values of the seston carbon to nitrogen ratio (C:NSES), chlorophyll a (Chl a), and δ15NSES were related to higher δ15NBg values. C:NSES and Chl a were also positively related to ∆15N; yet, C:NSES alone explained 70% of the variation. C:NSES values correlated with the presence of mixotrophic algae and ciliates that are key food resources for B. gracilipes. In our laboratory starvation experiment, the δ15NBg values increased significantly, pointing to use of internal N sources; yet, the change associated with starvation was less pronounced than that related to C:NSES changes in the field, suggesting depletion of the substrate pool in the former. We found that ∆15N values of omnivorous species consuming a low-quality diet would be higher than that from a conspecific with a high-quality diet; though fasting animals would show intermediate values.

Clarifying a trophic black box: stable isotope analysis reveals unexpected dietary variation in the Peruvian anchovy Engraulis ringens.

BACKGROUND: Small fishes play fundamental roles in pelagic ecosystems, channelling energy and nutrients from primary producers to higher trophic levels. They support globally important fisheries in eastern boundary current ecosystems like the Humboldt Current System (HCS) of the SE Pacific (Chile and Peru), where fish catches are the highest in the world (per unit area). This production is associated with coastal upwelling where fisheries target small pelagic fishes including the Peruvian anchovy (Engraulis ringens). The elevated biomass attained by small pelagics is thought to reflect their low trophic position in short/simple food chains. Despite their global importance, large gaps exist in our understanding of the basic ecology of these resources. For instance, there is an ongoing debate regarding the relative importance of phytoplankton versus animal prey in anchovy diet, and ecosystem models typically assign them a trophic position (TP) of ∼2, assuming they largely consume phytoplankton. Recent work based on both relative energetic content and stable isotope analysis (SIA) suggests that this value is too low, with δ 15N values indicating that anchovy TP is ca. 3.5 in the Peruvian HCS. METHODS: We characterised the trophic ecology of adult anchovies (n = 30), their putative prey and carnivorous jack mackerel (n = 20) captured from N Chile. SIA (δ 13C and δ 15N) was used to estimate the relative contribution of different putative prey resources. δ 15N was used to estimate population level trophic position. RESULTS: Anchovies showed little variability in δ 13C (-18.7 to -16.1‰) but varied greatly in δ 15N (13.8 to 22.8‰)-individuals formed two groups with low or high δ 15N values. When considered as a single group, mixing models indicated that anchovy diet was largely composed of zooplankton (median contribution: 95% credibility limits), with major contributions of crustacean larvae (0.61: 0.37-0.77) and anchovy (preflexion) larvae (0.15: 0.02-0.34), and the assimilation of phytoplankton was negligible (0.05: 0-0.22). The modal (95% credibility limits) estimate of TP for the pooled anchovy sample was 3.23 (2.93-3.58), overlapping with recent SIA-based estimates from Peru. When the two δ 15N groups were analysed separately, our results indicate that the lower δ 15N group largely assimilated materials from crustacean larvae (0.73: 0.42-0.88), with a TP of 2.91 (2.62-3.23). Mixing models suggested high δ 15N anchovies were cannibalistic, consuming anchovy preflexion larvae (0.55: 0.11-0.74). A carnivorous trophic niche was supported by high TP (3.79: 3.48-4.16), mirroring that of carnivorous juvenile jack mackerel (Trachurus murphyi; 3.80: 3.51-4.14). Our results support recent conclusions regarding high TP values of anchovy from Peru and reveal new insights into their trophic behaviour. These results also highlight the existence of cryptic trophic complexity and ecosystem function in pelagic food webs, classically considered as simple.

Coastal upwelling affects filter-feeder stable isotope composition across three continents.

Large-scale nutrient fertilisation by coastal upwelling promotes benthic productivity through energy subsidies from enhanced phytoplankton production, and predictions of alterations to upwelling under climate change have implications for benthic ecosystem functioning. We investigated the stable isotope compositions of two bioengineers of global significance, the mussels Perna perna and Mytilus galloprovincialis, from upwelling and non-upwelling sites in five upwelling systems. Samples from Brazil, South Africa and Oman exhibited lower δ13C values at upwelling sites than at non-upwelling sites, with clearer effects where upwelling is more intense and frequent. North West Africa showed variability, probably linked to Saharan dust input. We highlight the importance of upwelling to sustaining benthic primary consumers and the sensitivity of consumer diet to the intensity and frequency of upwelling within each region. These results have implications in relation to climate change scenario effects on upwelling events, with potential cascading effects on higher trophic levels and ecosystem functioning.

Approaches to integrating genetic data into ecological networks.

As molecular tools for assessing trophic interactions become common, research is increasingly focused on the construction of interaction networks. Here, we demonstrate three key methods for incorporating DNA data into network ecology and discuss analytical considerations using a model consisting of plants, insects, bats and their parasites from the Costa Rica dry forest. The simplest method involves the use of Sanger sequencing to acquire long sequences to validate or refine field identifications, for example of bats and their parasites, where one specimen yields one sequence and one identification. This method can be fully quantified and resolved and these data resemble traditional ecological networks. For more complex taxonomic identifications, we target multiple DNA loci, for example from a seed or fruit pulp sample in faeces. These networks are also well resolved but gene targets vary in resolution and quantification is difficult. Finally, for mixed templates such as faecal contents of insectivorous bats, we use DNA metabarcoding targeting two sequence lengths (157 and 407 bp) of one gene region and a MOTU, BLAST and BIN association approach to resolve nodes. This network type is complex to generate and analyse, and we discuss the implications of this type of resolution on network analysis. Using these data, we construct the first molecular-based network of networks containing 3,304 interactions between 762 nodes of eight trophic functions and involving parasitic, mutualistic and predatory interactions. We provide a comparison of the relative strengths and weaknesses of these data types in network ecology.