Differences in leaf and root litter decomposition in tropical montane rainforests are mediated by soil microorganisms not by decomposer microarthropods.

Background: Plant litter decomposition is a key process in carbon and nutrient cycling. Among the factors determining litter decomposition rates, the role of soil biota in the decomposition of different plant litter types and its modification by variations in climatic conditions is not well understood. Methods: In this study, we used litterbags with different mesh sizes (45 µm, 1 mm and 4 mm) to investigate the effect of microorganisms and decomposer microarthropods on leaf and root litter decomposition along an altitudinal gradient of tropical montane rainforests in Ecuador. We examined decomposition rates, litter C and N concentrations, microbial biomass and activity, as well as decomposer microarthropod abundance over one year of exposure at three different altitudes (1,000, 2,000 and 3,000 m). Results: Leaf litter mass loss did not differ between the 1,000 and 2,000 m sites, while root litter mass loss decreased with increasing altitude. Changes in microbial biomass and activity paralleled the changes in litter decomposition rates. Access of microarthropods to litterbags only increased root litter mass loss significantly at 3,000 m. The results suggest that the impacts of climatic conditions differentially affect the decomposition of leaf and root litter, and these modifications are modulated by the quality of the local litter material. The findings also highlight litter quality as the dominant force structuring detritivore communities. Overall, the results support the view that microorganisms mostly drive decomposition processes in tropical montane rainforests with soil microarthropods playing a more important role in decomposing low-quality litter material.

Litter Mixing Alters Microbial Decomposer Community to Accelerate Tomato Root Litter Decomposition.

Mixing plant litters of multiple species can alter litter decomposition, a key driver of carbon and nutrient cycling in terrestrial ecosystems. Changes in microbial decomposer communities is proposed as one of the mechanisms explaining this litter-mixture effect, but the underlying mechanism is unclear. In a microcosm litterbag experiment, we found that, at the early stage of decomposition, litter mixing promoted tomato root litter decomposition, thus generating a synergistic nonadditive litter-mixture effect. The transplanting decomposer community experiment showed that changes in microbial decomposer communities contributed to the nonadditive litter-mixture effect on tomato root litter decomposition. Moreover, litter mixing altered the abundance and diversity of bacterial and fungal communities on tomato root litter. Litter mixing also stimulated several putative keystone operational taxonomic units (OTUs) in the microbial correlation network, such as Fusarium sp. fOTU761 and Microbacterium sp. bOTU6632. Then, we isolated and cultured representative isolates of these two taxa, named Fusarium sp. F13 and Microbacterium sp. B26. Subsequent in vitro tests found that F13, but not B26, had strong decomposing ability; moreover, these two isolates developed synergistic interaction, thus promoted litter decomposition in coculture. Addition of F13 or B26 both promoted the decomposing activity of the resident decomposer community on tomato root litter, confirming their importance for litter decomposition. Overall, litter mixing promoted tomato root litter decomposition through altering microbial decomposers, especially through stimulating certain putative keystone taxa. IMPORTANCE Microbial decomposer community plays a key role in litter decomposition, which is an important regulator of soil carbon and nutrient cycling. Though changes in decomposer communities has been proposed as one of the potential underlying mechanisms driving the litter-mixture effects, direct evidence is still lacking. Here, we demonstrated that litter mixing stimulated litter decomposition through altering microbial decomposers at the early stage of decomposition. Moreover, certain putative keystone taxa stimulated by litter mixing contributed to the nonadditive litter-mixture effect. In vitro culturing validated the role of these taxa in litter decomposition. This study also highlights the possibility of regulating litter decomposition through manipulating certain microbial taxa.

Leaf litter identity rather than diversity shapes microbial functions and microarthropod abundance in tropical montane rainforests.

In tropical forest ecosystems leaf litter from a large variety of species enters the decomposer system, however, the impact of leaf litter diversity on the abundance and activity of soil organisms during decomposition is little known. We investigated the effect of leaf litter diversity and identity on microbial functions and the abundance of microarthropods in Ecuadorian tropical montane rainforests. We used litterbags filled with leaves of six native tree species (Cecropia andina, Dictyocaryum lamarckianum, Myrcia pubescens, Cavendishia zamorensis, Graffenrieda emarginata, and Clusia spp.) and incubated monocultures and all possible two- and four-species combinations in the field for 6 and 12 months. Mass loss, microbial biomass, basal respiration, metabolic quotient, and the slope of microbial growth after glucose addition, as well as the abundance of microarthropods (Acari and Collembola), were measured at both sampling dates. Leaf litter diversity significantly increased mass loss after 6 months of exposure, but reduced microbial biomass after 12 months of exposure. Leaf litter species identity significantly changed both microbial activity and microarthropod abundance with species of high quality (low C-to-N ratio), such as C. andina, improving resource quality as indicated by lower metabolic quotient and higher abundance of microarthropods. Nonetheless, species of low quality, such as Clusia spp., also increased the abundance of Oribatida suggesting that leaf litter chemical composition alone is insufficient to explain variation in the abundances of soil microarthropods. Overall, the results provide evidence that decomposition and microbial biomass in litter respond to leaf litter diversity as well as litter identity (chemical and physical characteristics), while microarthropods respond only to litter identity but not litter diversity.

Tropical herbivorous phasmids, but not litter snails, alter decomposition rates by modifying litter bacteria.

Consumers can alter decomposition rates through both feces and selective feeding in many ecosystems, but these combined effects have seldom been examined in tropical ecosystems. Members of the detrital food web (litter-feeders or microbivores) should presumably have greater effects on decomposition than herbivores, members of the green food web. Using litterbag experiments within a field enclosure experiment, we determined the relative effects of common litter snails (Megalomastoma croceum) and herbivorous walking sticks (Lamponius portoricensis) on litter composition, decomposition rates, and microbes in a Puerto Rican rainforest, and whether consumer effects were altered by canopy cover presence. Although canopy presence did not alter consumers' effects, focal organisms had unexpected influences on decomposition. Decomposition was not altered by litter snails, but herbivorous walking sticks reduced leaf decomposition by about 50% through reductions in high quality litter abundance and, consequently, lower bacterial richness and abundance. This relatively unexplored but potentially important link between tropical herbivores, detritus, and litter microbes in this forest demonstrates the need to consider autotrophic influences when examining rainforest ecosystem processes.

Woody encroachment slows decomposition and termite activity in an African savanna.

Woody encroachment can lead to a complete switch from open habitats to dense thickets, and has the potential to greatly alter the biodiversity and ecological functioning of grassy ecosystems across the globe. Plant litter decomposition is a critical ecosystem process fundamental to nutrient cycling and global carbon dynamics, yet little is known about how woody encroachment might alter this process. We compared grass decay rates of heavily encroached areas with adjacent nonencroached open areas in a semi-arid South African savanna using litterbags that allowed or excluded invertebrates. We also assessed the effect of woody encroachment on the activity of termites- dominant decomposer organisms in savanna systems. We found a significant reduction in decomposition rates within encroached areas, with litter taking twice as long to decay compared with open savanna areas. Moreover, invertebrates were more influential on grass decomposition in open areas and termite activity was substantially lower in encroached areas, particularly during the dry season when activity levels were reduced to almost zero. Our results suggest that woody encroachment created an unfavourable environment for invertebrates, and termites in particular, leading to decreased decomposition rates in these areas. We provide the first quantification of woody encroachment altering the functioning of African savanna ecosystems through the slowing of aboveground plant decomposition. Woody encroachment is intensifying across the globe, and our results suggest that substantial changes to the carbon balance and biodiversity of grassy biomes could occur.

Land use not litter quality is a stronger driver of decomposition in hyperdiverse tropical forest.

In hyperdiverse tropical forests, the key drivers of litter decomposition are poorly understood despite its crucial role in facilitating nutrient availability for plants and microbes. Selective logging is a pressing land use with potential for considerable impacts on plant-soil interactions, litter decomposition, and nutrient cycling. Here, in Borneo's tropical rainforests, we test the hypothesis that decomposition is driven by litter quality and that there is a significant "home-field advantage," that is positive interaction between local litter quality and land use. We determined mass loss of leaf litter, collected from selectively logged and old-growth forest, in a fully factorial experimental design, using meshes that either allowed or precluded access by mesofauna. We measured leaf litter chemical composition before and after the experiment. Key soil chemical and biological properties and microclimatic conditions were measured as land-use descriptors. We found that despite substantial differences in litter quality, the main driver of decomposition was land-use type. Whilst inclusion of mesofauna accelerated decomposition, their effect was independent of land use and litter quality. Decomposition of all litters was slower in selectively logged forest than in old-growth forest. However, there was significantly greater loss of nutrients from litter, especially phosphorus, in selectively logged forest. The analyses of several covariates detected minor microclimatic differences between land-use types but no alterations in soil chemical properties or free-living microbial composition. These results demonstrate that selective logging can significantly reduce litter decomposition in tropical rainforest with no evidence of a home-field advantage. We show that loss of key limiting nutrients from litter (P & N) is greater in selectively logged forest. Overall, the findings hint at subtle differences in microclimate overriding litter quality that result in reduced decomposition rates in selectively logged forests and potentially affect biogeochemical nutrient cycling in the long term.

Leaf Litter Chemistry Drives the Structure and Composition of Soil Testate Amoeba Communities in a Tropical Montane Rainforest of the Ecuadorian Andes.

We investigated the role of leaf litter chemistry and richness in affecting testate amoeba communities of tropical rainforest in the Ecuadorian Andes. Litterbags containing leaf litter from four dominating tree species (Clusia sp., Myrcia pubescens, Graffenrieda emarginata, and Cecropia andina) with richness 1, 2, and 4 species were established and exposed in the field for 12 months at 2000 m a.s.l. Chemical elements and compounds of leaf litter were analyzed before exposure. At the end of exposure, microbial biomass and litter mass loss were measured, and living testate amoeba species number, density, biomass, and community composition were determined. In total, 125 testate amoeba species colonized the litter in litterbags. The results suggest that high litter nitrogen and low lignin concentrations are indicators of high litter quality for testate amoebae density and species richness. Their species number and density significantly declined in the order 1 > 4 > 2 leaf litter species and varied with leaf litter chemistry being at a maximum in high-quality single leaf litter species and low in low-quality leaf litter. Further, the addition of litter of high-quality to low-quality litter increased testate amoebae biomass and density; however, the values did not exceed the ones in single high-quality litter treatments. Moreover, the structure of testate amoeba communities varied with litter chemistry, with Fe, Na, lignin, and litter C-to-N ratio being of major importance, and indicating that litter chemistry reflects habitat quality for testate amoebae. Overall, the data show that leaf litter chemistry overrides leaf litter richness in structuring testate amoeba communities.

Decomposition rate and enzymatic activity of composted municipal waste and poultry manure in the soil in a biofuel crops field.

BACKGROUND: Biofuel crops are gaining importance because of the need to replace non-renewable sources. Also, due to the increasing amounts of wastes generated, there is the need to recycle them to the soil, both to fertilize crops and to improve soil physical properties through organic matter increase and microbiological changes in the rhizosphere. We therefore studied the influence of six biofuel crops (elephant grass, giant cane, sugarcane, blue gum, black cottonwood, willow) on the decomposition rate and enzymatic activity of composted municipal solid waste and poultry manure. Organic amendments were incubated in the field (litterbag method), buried near each plant or bare soil. Biomass decrease and dehydrogenase, urease and acid phosphatase level in amendments was monitored over a 180-day period. Soil under the litterbags was analysed for the same enzymatic activity and organic matter fractions (last sampling). After 365 days, a fractionation of organic matter was carried out in both amendments and soil under the litterbags. RESULTS: For compost, willow and sugarcane generally led to the greatest enzymatic activity, at the end of the experiment. For manure, dehydrogenase activity decreased sharply with time, the smallest value near sugarcane, while phosphatase and urease generally presented the highest values, at the beginning or after 90 days' incubation. Clustering showed that plant species could be grouped based on biomass and enzymes measured over time. CONCLUSIONS: Plant species influenced the decomposition rate and enzymatic activities of the organic amendments. Overall, mineralization of both amendments was associated with a greater urease activity in soils. Dehydrogenase activity in manure was closely associated with urease activity. © 2016 Society of Chemical Industry.

Differential contribution of soil biota groups to plant litter decomposition as mediated by soil use.

Plant decomposition is dependant on the activity of the soil biota and its interactions with climate, soil properties, and plant residue inputs. This work assessed the roles of different groups of the soil biota on litter decomposition, and the way they are modulated by soil use. Litterbags of different mesh sizes for the selective exclusion of soil fauna by size (macro, meso, and microfauna) were filled with standardized dried leaves and placed on the same soil under different use intensities: naturalized grasslands, recent agriculture, and intensive agriculture fields. During five months, litterbags of each mesh size were collected once a month per system with five replicates. The remaining mass was measured and decomposition rates calculated. Differences were found for the different biota groups, and they were dependant on soil use. Within systems, the results show that in the naturalized grasslands, the macrofauna had the highest contribution to decomposition. In the recent agricultural system it was the combined activity of the macro- and mesofauna, and in the intensive agricultural use it was the mesofauna activity. These results underscore the relative importance and activity of the different groups of the edaphic biota and the effects of different soil uses on soil biota activity.

How do microlocal environmental variations affect microbial activities of a Pinus halepensis litter in a Mediterranean coastal area?

Mediterranean coastal ecosystems suffer many different types of natural and anthropogenic environmental pressure. Microbial communities, major conductors of organic matter decomposition are also subject to these environmental constraints. In this study, our aim was to understand how microbial activities vary at a small spatio-temporal scale in a Mediterranean coastal environment. Microbial activities were monitored in a Pinus halepensis litter collected from two areas, one close to (10 m) and one far from (300 m) the French Mediterranean coast. Litters were transferred from one area to the other using litterbags and studied via different microbial indicators after 2, 5 and 13 months. Microbial Basal Respiration, qCO2, certain enzyme activities (laccase, cellulase, ß-glucosidase and acid phosphatase) and functional diversity via Biolog microplates were assayed in litterbags left in the area of origin as well as in litterbags transferred from one area to the other. Results highlight that microbial activities differ significantly in this short spatial scale over time. The influence of microlocal conditions more intensified for litters situated close to the sea, especially during summer seems to have a stressful effect on microbial communities, leading to less efficient functional activities. However, microbial activities were more strongly influenced by temporal variations linked to seasonality than by location.

Metal and nutrient dynamics in decomposing tree litter on a metal contaminated site.

In a forest on sandy, metal polluted soil, we examined effects of six tree species on litter decomposition rates and accompanied changes in metal (Cd, Zn) and nutrient (base cations, N, C) amounts. Decomposition dynamics were studied by means of a litterbag experiment lasting for 30 months. The decomposition peak occurred within the first year for all tree species, except for aspen. During litter decomposition, high metal litter types released part of their accumulated metals, whereas low metal litter types were characterized by a metal enrichment. Base cations, N and C were released from all litter types. Metal release from contaminated litter might involve risks for metal dispersion towards the soil. On the other hand, metal enrichment of uncontaminated litter may be ecologically relevant as it can be easily transported or serve as food source.

Cellulase and xylanase activity during the decomposition of three aquatic macrophytes in a tropical oxbow lagoon

Due to the connection between enzymatic activity and degradation of different fractions of organic matter, enzyme assays can be used to estimate degradation rates of particulate and dissolved organic carbon in freshwater systems. The aim of this study was to quantify and model the enzymatic degradation involving the decomposition of macrophytes, describing temporal activity of cellulases (EC 3.2.1.4 and EC 3.2.1.91) and xylanase (EC 3.2.1.8) during in situ decomposition of three aquatic macrophytes (Salvinia sp., Eichhornia azurea and Cyperus giganteus) on the surface and water-sediment interface (w-s interface) of an oxbow lagoon (Óleo lagoon) within a natural Brazilian Savanna Reserve. Overall, the enzymatic degradation of aquatic macrophytes in Óleo lagoon occurred during the whole year and was initiated together with leaching. Xylanase production was ca. 5 times higher than cellulase values due to easy access to this compound by cellulolytic microorganisms. Enzymatic production and detritus mass decay were similar on the surface and w-s interface. Salvinia sp. was the most recalcitrant detritus, with low mass decay and enzymatic activity. E. azurea and C. giganteus decomposition rates and enzymatic production were high and similar. Due to the physicochemical homogeneity observed in the Óleo lagoon, the differences between the decay rates of each species are mostly related with detritus chemical quality.

Decomposição e dinâmica de liberação de nitrogênio e fósforo de frações vegetais de Salvinia auriculata Aubl em um reservatório da Amazônia legal / Decomposition and release dynamics of nitrogen and phosphorous from vegetal fractions of Salvinia auriculata Aubl in a Legal Amazon reservoir

Este estudo teve como objetivo determinar os coeficientes de decomposição da parte submersa (PS) e aérea (PA) de Salvinia auriculata em duas profundidades da coluna de água (superfície e sedimento). Também visou avaliar o rendimento do processo de perda de massa assim como a evolução temporal dos teores de fósforo e nitrogênio. As macrófitas foram separadas em partes; em seguida, foram secas até peso constante. Os materiais vegetais foram depositados em sacos de decomposição e incubados no reservatório da UHE Lajeado, Tocantins. As análises dos resultados de perda de massa revelaram que não houve diferenças significativas entre os PA-sed e PA-sup (p > 0,05), entretanto, os PA-sed foram significativamente diferentes dos PS-sed (p < 0,05) e dos PS-sup (p < 0,01). Os PA-sed apresentaram k = 0,0102 dia-1 e as incubadas na superfície (PA-sup) um k = 0,0067 dia-1, os PS-sed apresentaram um k = 0,0027 dia-1 e os PS-sup um k = 0,0040 dia-1. Durante os primeiros dias de decomposição foram liberadas grandes concentrações de fósforo e nitrogênio pelo processo de lixiviação; a partir do 14º dia foi observada uma tendência de aumento nas concentrações de nitrogênio, fato provavelmente relacionado com o enriquecimento dos detritos pela biomassa microbiana.

This study aimed to determine the decomposition coefficients of the submerged (SP) and aerial part (AP) of S. auriculata at two different depths within water column (surface and sediment). It also quantified the decomposition yield of S. auriculata and the temporal changes of nitrogen and phosphorous content of the remaining biomass. The macrophytes were fractionated in parts and were dried in sequence until attaining constant weight. The litterbags with plant material were incubated in the reservoir of UHE Lajeado. The results of mass loss showed that there were no significant differences among the AP-sed and AP-sur (p > 0.05). However, the AP-sed was significantly different from SP-sed (p < 0.05) and SP-sur (p < 0.01). The AP-sed presented a decay coefficient (k) of 0.0102 day-1 and AP-sur a k of 0.0067 day-1. The SP-sed presented a k of 0.0027 day-1 and the SP-sur 0.0040 day-1. It was also noticed that during the first days of decomposition great amounts of nitrogen and phosphorous were solubilized. This event was related to the leachate process; from the 14th day of decomposition, an increasing trend was observed in nitrogen concentrations. This fact was probably related to detritus enrichment by microbial colonization.

Cellulase and xylanase activity during the decomposition of three aquatic macrophytes in a tropical oxbow lagoon.

Due to the connection between enzymatic activity and degradation of different fractions of organic matter, enzyme assays can be used to estimate degradation rates of particulate and dissolved organic carbon in freshwater systems. The aim of this study was to quantify and model the enzymatic degradation involving the decomposition of macrophytes, describing temporal activity of cellulases (EC 3.2.1.4 and EC 3.2.1.91) and xylanase (EC 3.2.1.8) during in situ decomposition of three aquatic macrophytes (Salvinia sp., Eichhornia azurea and Cyperus giganteus) on the surface and water-sediment interface (w-s interface) of an oxbow lagoon (Óleo lagoon) within a natural Brazilian Savanna Reserve. Overall, the enzymatic degradation of aquatic macrophytes in Óleo lagoon occurred during the whole year and was initiated together with leaching. Xylanase production was ca. 5 times higher than cellulase values due to easy access to this compound by cellulolytic microorganisms. Enzymatic production and detritus mass decay were similar on the surface and w-s interface. Salvinia sp. was the most recalcitrant detritus, with low mass decay and enzymatic activity. E. azurea and C. giganteus decomposition rates and enzymatic production were high and similar. Due to the physicochemical homogeneity observed in the Óleo lagoon, the differences between the decay rates of each species are mostly related with detritus chemical quality.

Biodiversity and decomposition in experimental grassland ecosystems.

We examined the impact of biodiversity on litter decomposition in an experiment that manipulated plant species richness. Using biomass originating from the experimental species richness gradient and from a species used as a common substrate, we measured rates of decomposition in litterbags in two locations: in situ in the experiment plots and in an adjacent common garden. This allowed us to separate the effects of litter quality and decomposition location on decomposition. We found that plant species richness had a significant, but minor negative effect on the quality (nitrogen concentration) of the biomass. Neither litter type nor location had a consistent effect on the rate of carbon and nitrogen loss over a 1-year period. Thus, the increased productivity and corresponding lower soil available nitrogen levels observed in high diversity plots do not lead to faster litter decomposition or faster nitrogen turnover. This supports the hypothesis that increased productivity corresponding with higher species richness results in increased litter production, higher standing litter pools and a negative feedback on productivity, because of an increased standing nitrogen pool in the litter.

Kinetics of microbial degradation of vascular plant material in two wetland ecosystems.

Vascular plant decomposition was followed during two different years in one freshwater and one marine wetland in southeastern Georgia, USA, using a modified litterbag technique. Chemical analysis of plant material revealed different rates of decomposition for different components of the plant material (soluble components, α-cellulose, hemicellulose, and lignin) and, further, that rates of decomposition of each component changed over time, such that the specific rate of decay for each fraction decreased as decomposition proceeded. Three mathematical models which differen in their treatment of the biochemical heterogeneity of vascular plant detritus were investigated with regard to their relative abilities to describe decomposition kinetics from the field incubations as well as from laboratory microcosm studies with radiolabeled plant material. A decaying coefficient model, which treats plant detritus as a single component but allows for a decreasing specific decomposition rate as material ages, was most successful in describing kinetics of decomposition. This model accomodates the changes in quality of vascular plant detritus resulting from preferential decomposition of more labile components (e.g., non-lignocellulosic material and holocellulose) and the relative accumulation of more refractory components (e.g., lignin) observed with time. The model also accomodates the potential transformation of various plant components into more refractory compounds (humification) during the decomposition process.