First record of a neonate bluntnose sixgill shark (Hexanchus griseus) from Baja California Sur, Mexico.

The bluntnose sixgill shark (Hexanchus griseus) is a wide-ranged deep-water shark species found off continental and insular shelves. Despite its global distribution, little is known about the reproductive ecology of the species, particularly with regard to the location and timing of important phenological events such as mating and pupping. In this study, we report the landing of a neonate H. griseus individual from an artisanal fishing camp in Baja California Sur, Mexico. This represents only the ninth confirmed record of the species from the Mexican Pacific and the first to report a neonate specimen in Mexican waters. We discuss this specimen in the context of the environmental conditions in which it was found, ultimately suggesting that these shallow coastal waters may be an important pupping ground for H. griseus in the region. Furthermore, the specimen was found during the winter months (whereas all previous reports have suggested H. griseus pups during the summer), implying regional variation in reproductive periodicity, or the presence of multiple reproductive events per year. This study provides novel insight into the reproductive biology of H. griseus and the ecological characteristics of the species in the Northern Mexican Pacific.

Morphometric and taxonomic approach to describe Heterospio variabilis (Annelida, Longosomatidae), a new species with three size-dependent morphotypes, from the Gulf of California, Eastern Pacific.

The Longosomatidae, a poorly known polychaete family, includes only 23 recognized species; in this study, based on morphometric and taxonomic analyses, we describe a new species with three morphotypes: Heterospio variabilis from the Gulf of California, Mexico. The specimens examined exhibit large morphological variations but were clearly separated from close species due to a unique combination of morphological characters: chaetiger 9 as the first elongated chaetiger, four to eight branchial pairs; chaetae from chaetiger 10 forming rings in two rows, posterior row with thin and robust capillaries, anterior row with subuluncini, aristate spines, acicular spines and thick acicular spines. With the discriminant analysis, carried out on 11 morphometric characters, the presence of three morphological groups were recognized (Wilks' lambda= 0.093, p = 0.0001). However, the variables selected to discriminate the specimens (partial Wilks' lambda > 0.57) were correlated to their size: number of branchiae, body width, prostomium width, rate length CH9/CH1-CH8, length CH1-CH8 and length CH9 (r > 0.5). So, we concluded that they belong to a single species with three morphotypes: morpho A with eight branchial pairs, morpho B with 5-6-7 pairs and morpho C with 4 pairs. No correlations between the distribution of the distinct morphotypes along the eastern gulf shelf and the environmental conditions where they settle were detected.

Equinodermos de la colección biológica del Laboratorio de Ecología Molecular, Microbiología y Taxonomía (LEMITAX) de la Universidad de Guadalajara, México / Echinoderms of the biological collection of the Laboratorio de Ecología Molecular, Microbiología y Taxonomía (LEMITAX) of the Universidad de Guadalajara, Mexico

Resumen Introducción: Las colecciones biológicas representan los cimientos para el conocimiento y manejo de la biodiversidad de una región. No obstante, en México, y en particular en el Pacífico central mexicano (PCM), las colecciones regionales enfocadas en equinodermos, son escasas. La colección biológica del Laboratorio de Ecología Molecular, Microbiología y Taxonomía (LEMITAX) pertenece al Centro Universitario de Ciencias Biológicas y Agropecuarias de la Universidad de Guadalajara, Jalisco, México y sirve como referencia de la biodiversidad marina de la región. Objetivo: Dar a conocer la riqueza de equinodermos resguardada en la colección del LEMITAX. Métodos: Los organismos depositados en LEMITAX se han recolectado mediante buceo libre, SCUBA, y arrastres de fondo con dragas biológicas en diversas áreas del Pacífico mexicano. Los especímenes están preservados en húmedo (alcohol al 70 %; Asteroidea, Echinoidea, Holothuroidea y Ophiuroidea) o en seco (Asteroidea y Echinoidea). Resultados: Los especímenes provienen de los estados de Sinaloa, Nayarit, Jalisco y Colima, incluyendo dos áreas naturales protegidas, el Parque Nacional Isla Isabel y el Santuario de las islas e islotes de Bahía de Chamela. La colección dispone de 20 761 ejemplares de equinodermos distribuidos en 75 especies (10 asteroideos, 17 ofiuroideos, 17 equinoideos y 31 holoturoideos). El estado mejor representado es Jalisco (64 especies) seguido de Nayarit (31), Colima (20) y Sinaloa (11). Bahía de Chamela es la mejor representada (60), seguido de Isla Isabel (22). Se aportan 34 registros nuevos, la mayor contribución es para Bahía de Chamela con 14 registros nuevos, seguido del estado de Jalisco (siete), Nayarit (cuatro), Colima (tres) e Isla Isabel (tres). Para el PCM, se reporta por primera vez la presencia de Astropecten ornatissimus, Luidia phragma, Cucumaria crax y Holothuria (Cystipus) casoae, lo que actualiza su riqueza de equinodermos a 197 especies. Se amplía el intervalo de distribución batimétrica de Ophiactis simplex, Ophiocomella alexandri y Holothuria (Cystipus) casoae, así como el intervalo de distribución geográfica de Cucumaria crax. Conclusiones: Las colecciones biológicas de las universidades contribuyen de manera sustancial al conocimiento de la biodiversidad, como se refleja en la colección LEMITAX, cuya revisión resultó en la actualización de la riqueza de equinodermos de la región.

Abstract Introduction: The biological collections represent the foundation for the knowledge and management of the biodiversity of a region. However, regional collections focused on echinoderms are scarce in Mexico, particularly in the Central Mexican Pacific (CMP). The biological collection of the Laboratorio de Ecología Molecular, Microbiología y Taxonomía (LEMITAX) belongs to the Centro Universitario de Ciencias Biológicas y Agropecuarias of the Universidad de Guadalajara, Jalisco, Mexico and it aims to serve as a reference for the region's marine biodiversity. Objective: To state the richness of echinoderms in the LEMITAX collection. Methods: The organisms deposited at the LEMITAX have been collected by SCUBA, free-diving, and bottom trawls with biological dredges in different areas of the Mexican Pacific. The specimens are wet-preserved (70 % ethanol; Asteroidea, Echinoidea, Holothuroidea, and Ophiuroidea) or dried (Asteroidea and Echinoidea). Results: The specimens are from the states of Sinaloa, Nayarit, Jalisco, and Colima, including two natural protected areas (NPAs), the Isabel Island National Park and the sanctuary of the Islands and Islets of Bahía de Chamela. The collection has 20 761 specimens of echinoderms distributed in 75 species (10 asteroids, 17 ophiuroids, 17 echinoids, and 31 holothuroids). The best-represented state is Jalisco (64 species), followed by Nayarit (31), Colima (20), and Sinaloa (11). Concerning the NPAs, Chamela is the best represented (60), followed by Isabel Island (22). Thirty-four new records are added; the largest contribution is for Chamela, with 14 new records, followed by the state of Jalisco (seven), Nayarit (four), Colima (three), and Isabel Island (three). For the CMP, the presence of Astropecten ornatissimus, Luidia phragma, Cucumaria crax, and Holothuria (Cystipus) casoae, is reported for the first time, updating the echinoderm richness to 197 species. The bathymetric distribution range of Ophiactis simplex, Ophiocomella alexandri, and Holothuria (Cystipus) casoae is extended, as well as the geographic range of Cucumaria crax. Conclusions: The biological collections deposited in the universities contribute substantially to the knowledge of biodiversity, as reflected in the LEMITAX collection, whose revision resulted in the updating of the echinoderm richness in the region.

Size at sexual maturity, seasonal variation by maturity stages, and fecundity of the spotted round ray (Urobatis maculatus) and the thorny stingray (Urotrygon rogersi) from the northern tropical eastern Pacific.

Round rays (family: Urotrygonidae) are commonly caught as by-catch by shrimp trawl fisheries in the tropical eastern Pacific (TEP). However, little information on their life history and catch species composition exists for most round ray species, preventing the evaluation of the impact of fishing on their populations. The mean size at sexual maturity (DW50), seasonal variation by maturity stages, and fecundity for two round ray species caught during shrimp trawl research cruises in the south-eastern Gulf of California (northern TEP) were estimated using a multi-model approach and inference for the first time, to determine the part of the population of each species that is being affected by shrimp trawling. Disc width (DW) ranged from 7.0 to 30.9 cm for the spotted round ray (Urobatis maculatus), and 7.2-33.5 cm for the thorny stingray (Urotrygon rogersi), with females reaching larger sizes than males in both species. The DW50 was estimated at 12.8 and 11.8 cm DW for the males and females of U. maculatus, respectively, whereas for U.rogersi, it was 15.0 and 18.4 cm DW for males and females, respectively. Embryos were found in females ≥14.5 cm DW in both species. The maximum fecundity was five embryos for U. maculatus (mean = 3.1 ± 0.2 S.E., mode = 4), and six embryos for U. rogersi (mean = 3.0 ± 0.3 S.E., mode = 2). Fecundity and embryo size did not vary with maternal size. Male and female immature and mature individuals for both species, including pregnant females, were found in the catches in all seasons of the year. Our results can help determine the vulnerability of the studied species populations to fishing pressure from shrimp trawling in the northern TEP and guide the development of future monitoring strategies and conservation actions for these species, if necessary.

Combined use of SAR images and numerical simulations to identify the source and trajectories of oil spills in coastal environments.

Remote sensing data and numerical simulation are important tools to rebuild any oil spill accident letting to identify its source and trajectory. Through these tools was identified an oil spill that affected Oaxacan coast in October 2022. The SAR images were processed with a standard method included in SNAP software, and the numerical simulation was made using Lagrangian transport model included in GNOME software. With the combining of these tools was possible to discriminate the look-alikes from true oil slicks; which are the main issue when satellite images are used. Obtained results showed that 4.3m3 of crude oil were released into the ocean from a punctual point of oil pollution. This oil spill was classified such as a small oil spill. The marine currents and weathering processes were the main drivers that controlled the crude oil displacement and its dispersion. It was estimated in GNOME that 1.6 m3 of crude oil was floating on the sea (37.2 %), 2.4 m3 was evaporated into the atmosphere (55.8 %) and 0.3 m3 reached the coast of Oaxaca (7 %). This event affected 82 km of coastline, but the most important touristic areas as well as turtle nesting zones were not affected by this small crude oil spill. Results indicated that the marine-gas-pump number 3 in Salina Cruz, Oaxaca, is a punctual point of oil pollution in the Southern Mexican Pacific Ocean. Further work is needed to assess the economic and ecological damage to Oaxacan coast caused by this small oil spill.

Taxonomical and functional diversity dynamics of conspicuous echinoderms in the northeastern tropical Pacific over a decade.

Understanding what determines spatio-temporal changes in echinoderm assemblages from an integrative perspective that considers biodiversity, species evenness, and species' niches could permit superior community-scale characterizations of habitat resilience to disturbance. Such an approach was taken herein by tracking a Central Mexican Pacific echinoderm assemblage between 2012 and 2021, and higher richness, diversity, evenness, and functional entity counts were associated with more heterogeneous benthic assemblages. Echinoderm taxonomic composition was influenced by ENSO events, with higher functional diversity found during La Niña events. Conservation strategies should focus on species with unique functional traits to maintain the balance of coral community functionality.

Isolation and characterization of novel microsatellite loci for the Eastern Pacific marine sponge Mycale cecilia by Illumina MiSeq sequencing.

BACKGROUND: Mycale cecilia is an abundant Eastern Tropical Pacific sponge living in a wide variety of habitats, including coral reefs where it may directly interact with corals. It is also known to possess secondary metabolites of pharmacological value. These aspects highlight the importance of having a better understanding of its biology, and genetic and population diversity. METHODS AND RESULTS: In the present study, we isolated and characterized twelve novel microsatellite loci by Illumina MiSeq sequencing. The loci were tested in 30 specimens collected from two coral reef localities (La Paz, Baja California Sur and Isabel Island, Nayarit) from the Mexican Pacific using M13(-21) labeling. All loci were polymorphic, with two to nine alleles per locus. Expected heterozygosities varied from 0.616 to 0.901. Eleven loci were tested and successfully amplified in M. microsigmatosa from the Gulf of Mexico. CONCLUSION: Here we report the first microsatellite loci developed for a sponge species from the Eastern Pacific coast. These molecular markers will be used for population genetic studies of M. cecilia, and potentially in other congeneric species; particularly in vulnerable marine areas that require protection, such as coral reefs.

Towards reef restoration in Zihuatanejo, Guerrero, México: lessons learned

Introduction: Coral reef structures in Zihuatanejo, Guerrero are well-preserved. The coverage of living corals, near 60 % at several locations, makes them comparable to other coral reefs in the states of Oaxaca, Jalisco, and Nayarit and with high potential to promote their conservation. Objective: To present the outcome of 12 years of research in coral communities from Zihuatanejo, Guerrero, as a justifying argument for the current conservation efforts in the area. Methods: We developed a baseline on the conservation status of the reef structures, bioerosion processes and the source of major natural and anthropogenic impacts. We assessed the genetic diversity of the coral zooxanthellae symbionts, the outcome of a technique of coral transplantation to recover the coverage of living corals and the local ecological knowledge to involve local inhabitants to promote conservation. Results: At least five coral reefs remain exposed to a medium-low level of impact by bioerosion and anthropization. Coral transplantation experiments made in the area showed records of transplant survival nearing 90 %. Although the warming of the sea surface temperature that occurred during the El Niño of 2015-2016 caused coral bleaching and mortality in several coral populations in this area, there were no affectations attributed to this phenomenon in other locations. This response was not related to the level of exposure to anthropogenic impacts, and the presence of thermal resistant zooxanthellae was assessed using molecular tools, confirming the existence of zooxanthellae of the genus Durusdinium. The analysis of local ecological knowledge of the inhabitants of Zihuatanejo showed that they keep elaborate knowledge on the ecology of coral reefs. This is complemented with scientific knowledge that will encourage community participation in conservation strategies. Conclusions: A long-term multidisciplinary strategy is required for coral reef conservation that encompasses: 1) assessing the role of the overall holobiont in the thermal resistance of corals from this area and 2) establishing restoration strategies of coral reefs that include the local knowledge about marine ecology, for the establishment of coral reef protection and management schemes put in place by local inhabitants.

Introducción: Los arrecifes coralinos de Zihuatanejo Guerrero están bien conservados. La cobertura de corales vivos, cerca del 60 %, los hace comparables a otras comunidades coralinas presentes en Oaxaca, Jalisco y Nayarit y con un alto potencial para promover su conservación. Objetivo: Presentar los resultados de 12 años de investigación en las comunidades coralinas de Zihuatanejo, Guerrero, como un argumento que justifica los esfuerzos actuales de conservación en el área. Métodos: Desarrollamos una línea base del estado de conservación de la estructura arrecifal, los procesos de bioerosión y las fuentes principales de impactos naturales y antropogénicos. Evaluamos la diversidad genética de los simbiontes zooxantelados de los corales, el resultado de una técnica de trasplante de corales para recuperar la cobertura de corales vivos y el conocimiento ecológico local para desarrollar estrategias de conservación con participación local. Resultados: Cinco de esas comunidades coralinas permanecen expuestas a un nivel de impacto medio a bajo por bioerosión y antropización. Los experimentos de trasplante de corales en el área mostraron una supervivencia cercana al 90 %. Aunque el calentamiento de la temperatura superficial del mar ocurrido durante el evento El Niño 2015-16 causó blanqueamiento y mortalidad coralina en algunas poblaciones de corales del área, no hubo afectaciones atribuidas a este fenómeno en otras. Esta respuesta no se relacionó con el nivel de exposición a impactos antropogénicos y la presencia de poblaciones de zooxantelas fue examinada usando herramientas moleculares, confirmando la existencia de una población del género Durusdinium. El análisis del conocimiento ecológico local de los habitantes de Zihuatanejo mostró que estos resguardan conocimientos complejos sobre la ecología de las comunidades coralinas. Este conocimiento es complementario al conocimiento científico y servirá para promover estrategias de participación ciudadana en la conservación de las comunidades coralinas. Conclusiones: Se requiere una estrategia multidisciplinaria de largo plazo para la conservación de las comunidades coralinas que incluya: 1) examinar el papel del holobionte completo en la resistencia térmica de los corales de esta área y 2) establecer estrategias de restauración en arrecifes coralinos que incluyan el conocimiento ecológico local para el establecimiento de esquemas de protección y manejo de los arrecifes coralinos a cargo de los habitantes locales.

Testing the effectiveness of natural and artificial substrates for coral reef restoration at Isla Isabel National Park, Mexico

Introduction: The branching coral Pocillopora is the main reef-building species in the Eastern Tropical Pacific (ETP) region. However, their populations have been threatened due to the intense effect of thermal-stress events in the last three decades. As a mitigating response, active restoration strategies have been developed. However, it has not been possible to establish specific protocols along the ETP's reefs. Objective: To evaluate the efficiency of two different substrates (natural vs. artificial), through coral growth comparison (extension rate and tissue area) in three Pocillopora coral morphospecies within a year. Methods: Coral growth was estimated by two techniques: extension rate and tissue area of P. cf. verrucosa, P. cf. capitata, and P. cf. damicornis every three months during a year. Results: The extension rate and superficial area growth vary among the coral morphospecies P. cf. verrucosa (16.33 mm yr-1 and 168.49 mm2 yr-1), P. cf. capitata (16.25 mm yr-1 and 176.83 mm2 yr-1), and P. cf. damicornis (12.38 mm yr-1 and 87.62 mm2 yr-1). The data reveals that substrate type did not affect Pocillopora growth, yet there was an effect caused by seasonal changes. Conclusions: This study demonstrates that coral restoration can be implemented using both natural and artificial substrata, with no differences in coral growth. We recommend the implementation of coral reef restoration programs, highlighting the importance of initiate during the warm season due to optimal growth performance of P. cf. verrucosa and P. cf capitata species, which improves the effectiveness of management actions in Isla Isabel National Park.

Introducción: Los corales ramificados del género Pocillopora son los constructores arrecifales más importantes del Pacífico Tropical Oriental (PTO). Sin embargo, sus poblaciones han disminuido por efectos de eventos de estrés térmico ocurridos las últimas décadas. Por ello, se han desarrollado estrategias de restauración activa como respuesta de mitigación, pero no ha sido posible establecer protocolos específicos para estas especies en el PTO. Objetivo: Evaluar la eficiencia de dos tipos de sustrato (natural vs. artificial) con base en la comparación del crecimiento de coral (tasa de extensión y área de tejido) en tres morfoespecies de Pocillopora a lo largo de un año. Métodos: Las estimaciones del crecimiento coralino se hicieron con dos técnicas (extensión lineal y área superficial) en P. cf. verrucosa, P. cf. capitata and P.cf. damicornis cada tres meses durante un año. Resultados: Las tasa de extensión y crecimiento del área superficial variaron entre las morfoespecies de P. cf. verrucosa (16.33 mm año-1 y 168.49 mm2 año-1), P. cf. capitata (16.25 mm año -1 y 176.83 mm2 año-1), y P.cf. damicornis (12.38 mm año-1 y 87.62 mm2 año-1). Los resultados mostraron que los tipos de sustratos no afectaron el crecimiento de los corales Pocillopora, aunque existió un efecto causado por el cambio de la estación climática, donde la estación cálida promueve un incremento su crecimiento. Conclusiones: Este estudio demuestra que la restauración de corales puede ser implementada con sustrato artificial o natural, sin diferencias en el crecimiento de corales entre ellos. Nosotros recomendamos continuar con la implementación de los programas de restauración de arrecifes de coral, resaltando, la importancia de iniciarlos en la estación cálida cuando existe un desempeño más óptimo en el crecimiento, particularmente de las especies P. cf. verrucosa y P. cf. capitata, lo cual ayudará a mejorar la efectividad de las acciones de manejo en el Parque Nacional Isla Isabel.

Palabras clave: Isla Isabel; coral hermatípico; Pacífico Central Mexicano Central; restauración arrecifal.

Comparison of fish assemblages recorded by visual census and video census / Comparación de ensamblajes de peces registrados por censo visual y censo por video

Abstract Introduction: Underwater visual censuses are the basis of many studies on fish ecology, however, a series of limitations and errors influence the traditional visual estimation of fish richness and abundance. Video techniques have been proposed to mitigate such errors, but there are few studies that compare the effectiveness of both methods. Objective: To compare the estimates obtained through the traditional census and the video census of the fish community of two localities in the central Mexican Pacific. Methods: We studied the fish community of two bays of Huatulco, Oaxaca, Mexico. We established sampling points in each bay and applied a traditional census and a diver-operated video census. We used comparison tests and analysis of similarity tests to compare richness, abundance and diversity by locality; and permutation tests for the same parameters at each sampling point. Results: Both censuses provide similar estimates regarding the richness, abundance, and diversity by locality and by sampling points. There were no statistically significant differences between traditional census and a diver-operated video census in terms of richness, abundance, and diversity. Conclusions: Video census using the diver-operated video technique can be used as a complement or as an alternative to traditional census. Its use can provide a more complete assessment, increase data acquisition, and implement long-term monitoring programs in areas where there are economic limitations for its operation.

Resumen Introducción: Los censos visuales submarinos son la base de muchos estudios sobre ecología de peces, sin embargo, una serie de limitaciones y errores influyen en la estimación visual tradicional de la riqueza y abundancia de peces. Se han propuesto las técnicas de video para mitigar tales errores, pero existen pocos estudios que comparen la efectividad de ambos métodos. Objetivo: Comparar las estimaciones obtenidas mediante el censo tradicional y el video censo de la comunidad de peces de dos localidades del Pacífico central mexicano. Métodos: Se estudió la comunidad de peces de dos bahías de Huatulco, Oaxaca, México. Se establecieron puntos de muestreo en cada bahía y se aplicó el censo tradicional y video censo operado por buzo. Se emplearon pruebas de comparación y análisis de pruebas de similitud para comparar riqueza, abundancia y diversidad por localidad; y pruebas de permutación para los mismos parámetros en cada punto de muestreo. Resultados: Ambos censos proporcionan estimaciones similares en cuanto a la riqueza, abundancia y diversidad por localidad y por punto de muestreo. No existieron diferencias estadísticamente significativas entre el censo tradicional y video censo operado por buzo respecto a riqueza, abundancia y diversidad. Conclusiones: El video censo mediante la técnica de video operado por buzo puede utilizarse como complemento o como alternativa al censo tradicional. Su uso puede proporcionar una evaluación más completa, aumentar la adquisición de datos e implementar programas de monitoreo a largo plazo en áreas donde existen limitaciones económicas para su operación.

Trace metal concentrations in California sea lions from rookeries exposed to different levels of coastal urbanization in Baja California, Mexico.

Concentrations of total mercury, total selenium, and cadmium ([THg], [TSe], [Cd]) were determined in hair of California sea lion (Zalophus californianus) pups from four islands of the Gulf of California and the Baja California Pacific coast (NG, CG, NP, and CP) to identify geographical differences and the effect of Se against Hg toxicity (TSe:THg molar ratio). THg displayed a strong north-south trend for both ecoregions, while TSe presented a significantly high concentration only for CG. TSe:THg molar ratios decreased when [THg] increased, with the lowest ratios presenting in NG pups, in which [THg] exceeded toxicological thresholds of concern. [Cd] presented similar values at all study sites except CG, which presented the lowest level. The present study shows that proximity to urbanized coastal areas has a strong influence on [THg] in pups, while [TSe] and [Cd] are probably more related to the physiological requirements of the species, and environmental conditions.

Fish community diversity in a coastal zone at southeastern Gulf of California, Mexico.

Although the southeast region of the Gulf of California has a high fish diversity, due to the high biological productivity, the coastal area of Nayarit has few studies in this regard. The main objective of this work is to describe the variability of the structure of the ichthyofauna in the coastal zone of Nayarit during an annual cycle. Biological samples were collected at 10 stations during February, May, July, and December 2014. The temperature, depth, salinity, and organic material and carbonates in sediments were also recorded. The analysis of diversity includes three facets: ecological, taxonomic, and functional. A total of 82 species belonging to 56 genera, 31 families, 11 orders, and two classes were identified. The most abundant species included Selene peruviana, Stellifer wintersteenorum, Cathorops sp., and Larimus argenteus. Of the total of identified species, 62% were considered as rare according to their abundance and frequency. Although the environmental variables analyzed were variable, all diversity indices did not reveal an evident spatio-seasonal pattern. Likewise, most values of average taxonomic distinctness presented the expected values. However, some values showed a low taxonomic diversity. The indices of functional diversity showed a stable functional richness and redundancy in the attributes of the species.

Mercury maternal transfer in two placental sharks and a yolk-sac ray from Baja California Sur, Mexico.

Total mercury (THg) concentrations were measured in muscle and liver of two placental viviparous sharks, the Pacific sharpnose shark (Rhizoprionodon longurio) and the brown smooth-hound (Mustelus henlei); as well as in the muscle, liver, and yolk of the yolk-sac viviparous speckled guitarfish (Pseudobatos glaucostigmus) in Baja California Sur. The aim was to determine which factors could be involved in maternal transfer and resultant maternal and embryonic THg concentration. Higher THg concentrations were found in pregnant females compared to embryos paired tissues. THg concentrations of embryo tissues decreased with total length (TL), except for the muscle of the Pacific sharpnose shark. THg concentrations of embryo muscle was positively related to THg concentration in the muscle of pregnant females. Embryos TL, muscle THg concentration of pregnant females, percentage of THg concentration in embryos, along with the reproductive strategy are relevant factors required to improve our understanding of THg concentration in embryo tissues.

Relationship between the distribution of vegetation and the environment in the coastal embryo dunes of Jalisco, México.

Background: The poorly developed soils of the embryo dunes imply little capacity for plant support, however, the adaptation mechanisms of plants respond sensitively to environmental variations, even when these variations are small, which results in a set of specialized habitats and flora that are rarely shared with other terrestrial ecosystems. The coastal dunes of the Mexican Pacific remain vaguely studied, this is why this research explored the relationship between environmental properties and the presence of plant species in the embryo dunes of the coast of Jalisco, Mexico. Methods: Twenty-nine sites were sampled, one or two sites per embryo dune, with a random stratified design. Geomorphological and vegetation data were collected at site. Laboratory determinations included soil color, particle size, organic matter, pH, electrical conductivity, magnetite content, and moisture retention. Statistical analysis included correlation analysis to identify relationships between environmental variables; principal component analysis (PCA) and cluster analysis to group dune sites by environmental properties; canonical correspondence analysis (CCA) to determine a possible significant relationship between the presence of plant species and environmental variables; cluster analysis to group dune sites by presence/absence of plant species and correlate both clusters to validate the relationship between them, the salient aspects of this relationship were described and the spatial distribution of the groups was mapped. Results: Eleven plant species were identified, six of them exclusive to the embryo dunes and the rest ubiquitous. The incipient development of these soils is reflected in a low content of organic matter, silt, clay, and moisture retention, with scattered data on granulometry, electrical conductivity, organic matter, and magnetite. Some significant correlations were found between some environmental properties, and the CCA showed a significant relationship between the presence of plant species and environmental variables (p-value of the Monte Carlo test = 0.026). The cluster analysis of dune sites according to environmental variables and the cluster analysis by presence/absence of plant species produces the formation of five groups of sites with significant environmental differences and five groups of sites with significant floristic differences. A significant connection (r = 0.471, p = 0.01) between the two clustering schemes also evidences the meaningful relationship between the presence of plant species and the environmental characteristics of the embryo dunes of Jalisco, Mexico. Differences in habitat preferences were observed among plant species exclusive to the embryo dunes; thus, Abronia maritima, Uniola pittieri, and Pectis arenaria showed a preference for embryo dunes with poor edaphic conditions, in contrast to Okenia hypogaea, Canavalia rosea, and Scaevola plumieri, which were mostly found in embryo dunes with higher fertility.

Coral calcification and carbonate production in the eastern tropical Pacific: The role of branching and massive corals in the reef maintenance.

Hermatypic corals have the potential to construct calcium carbonate (CaCO3 ) reef-framework, maintain habitats tridimensionality and contribute to both the biogeochemical and the geo-ecological functionality of coral reefs. However, in the past decades, coral reef growth capacity has been affected by multiple and cumulative anthropogenic stressors, threating the reef functionality and their ecosystem goods and services provision to humankind. This study evaluated temporal changes in geobiological growth characteristics as a function of live coral cover, calcification rate (extension rate and skeletal density) and coral carbonate production at Islas Marias archipelago from the eastern tropical Pacific, using historical data obtained in 2007 (López-Pérez et al., 2015, Marine Ecology, 37, 679) and data obtained through field and laboratory research between 2015 and 2018. Overall, live coral cover decreased (82%), where Pocillopora spp. corals reduced from 26% in 2007 to 4% in 2018, in contrast, Pavona spp. declined from 4.1% to 3.7% over the same period. Coral carbonate production ranged between 1.78 and 10.65 kg CaCO3  m-2  yr-1 , with a significant difference (threefold) between reef zones (shallow vs deep), highlighting the higher carbonate production at deep-reef sites. Coral cover, carbonate production and sclerocronological characteristics showed a decrease rate (between 30 and 60%) associated with thermal anomaly events such as La Niña (2010-2011) and El Niño (2014-2016), with positive sights of recovery (twofold) during the following years 2017-2018. This study provides evidence that massive Pavona and branching Pocillopora corals are key reef-building species at Islas Marias archipelago, due to their capability of sustaining live coral coverage and carbonate through thermal disturbance periods. Revealing, that corals at mid-water depths (>10 m) may significantly contribute to the long-term stability of biogenic reef-framework, and geo-ecological functionality of the eastern tropical Pacific reefs.

Mercury concentrations and stable isotopes (δ15N and δ13C) in fish muscle indicate human impacts in tropical coastal lagoons.

Coastal lagoons are essential nursery habitats of many marine fishes, but they are often sites of intense human activities that impact water quality and potentially the fish using these habitats. We compared the variability in nutrient uptake (using δ15N and δ13C) and total mercury (THg) levels in juveniles and adults of three common species in two lagoons on the central Mexican coast of the Pacific Ocean during the wet and dry seasons. One of three species, Achirus mazatlanus had higher THg, δ15N, and δ13C levels in the lagoon with the greatest wastewater inputs (Barra de Navidad). Delta13C varied seasonally for all three species and THg was higher in the dry season for Lutjanus argentiventris and in males of A. mazatlanus. Our results demonstrate that mercury and stable isotopes can identify impacts of human activities on estuarine ichthyofauna and the importance of understanding seasonal and spatial variability of measures that could impact monitoring and predictions of impacts in these lagoons.

Phylogenetic position of Acanthobothrium cleofanus (Cestoda: Onchoproteocephalidea) using molecular evidence.

Despite the large number of species described to date for the onchoprotepcephalid genus Acanthobothrium (207), only 16 named species have a genetic sequence. With this background, specimens of adult cestodes of the stingray Hypanus longus were collected off San Blas, Nayarit, and onchoproteocephalid larvae in the carangid fish Trachinotus rhodopus from Puerto Ángel, Oaxaca, both located on the Pacific coast of Mexico. The objective of this work is to investigate the phylogenetic position of these adults and larvae using nuclear ribosomal markers (18S rDNA and 28S rDNA). Morphologically, adult specimens were identified as Acanthobothrium cleofanus; larvae were identified only to family level. The phylogenetic position of both taxa was investigated based on the information of two nuclear molecular markers analyzed under Parsimony (PA) and Bayesian Inference (BI) methods. The newly generated sequences of A. cleofanus from Nayarit are identical to the sequences of several samples of Acanthobothrium sp. collected in the Mexican Pacific, which sequence are available in GenBank; DNA sequences obtained from onchoproteocephalid larva clearly place this taxon within Acanthobothrium but representing an independent lineage. In the resulting phylogenetic trees, Uncibilocularis okei was found nested within Acanthobothrium with an unstable position depending on the optimality criteria, indicating the need for more molecular analyzes with a greater number of species of both genera prior to define its phylogenetic relationships.

Notomastusbermejoi, a new species of Capitellidae (Annelida, Polychaeta) from the Gulf of California, with morphological remarks on species with hooks in thoracic chaetigers.

Notomastusbermejoi sp. nov. from the Gulf of California shelf is described, illustrated, and compared with its congeners bearing hooded hooks in thoracic chaetigers. This new species is characterized by the presence of a prostomial palpode, only notopodia in the first chaetiger, hooded hooks in neuropodia of chaetiger 11, and its distinct methyl green staining pattern consisting of: chaetigers 1-4 slightly stained, chaetigers 5-10 with green bands encircling the segments, and a darker, solid, green band encircling the body in chaetigers 11-12. It is mainly distributed in the central Gulf of California in fine sand bottoms (62-96%) at 32-106.4 m depth, tolerating a wide range of temperature (13.2-17.59 °C), dissolved oxygen (0.8-4.93 ml/L), and organic carbon (3.0-7.2%). The type material and original descriptions of Notomastus species with hooks in thoracic chaetigers were examined; an identification key and tables with morphological distinctive characteristics, methyl green staining patterns, and geographic distribution of these close species are provided.

Genetic variability of Sargassum liebmannii on the coast of Jalisco in the central Mexican Pacific revealed by molecular markers and morphological traits

BACKGROUND Sargassum liebmannii is widely distributed throughout rocky, coastal upwelling areas in the tropical Mexican Pacific. This brown algae is of great environmental and industrial importance. However, no information is available that documents the genetic or phenotypic variability of the species, which is needed to determine how it may react to environmental variation related to climate change. In this study, S. liebmannii specimens were collected from the coast of Jalisco, Mexico, and molecular and morphological characterization was conducted. Intraspecific variability was estimated according to the study areas. RESULTS The inter-simple sequence repeat (ISSR) markers indicated a polymorphism percentage of 95%. The Shannon index and Nei index showed relatively low values among the populations (0.3569 and 0.081, respectively). On the other hand, the genetic differentiation coefficient indicated inter- and intrapopulation values of 36.69% and 63.31%, respectively. The Jaccard similarity coefficient was used to determine the degree of similarity among individuals by geographical area. The morphological characteristics and environmental variables that were used to correlate phenotypes and genotypes indicated that S. liebmannii showed low genetic flow because of the presence of geographical barriers due to substrate that was not optimal for algal development. CONCLUSIONS The ISSR markers were useful for detecting genetic differences among S. liebmannii individuals. The results indicate that a coupled genotypic-phenotypic study is beneficial for documenting the variation present in the little-studied algal species. These studies may be used in future research to clarify taxonomic controversies while generating additional genomic information

New microsatellite loci for estimating genetic diversity and structure in Octopus hubbsorum from Nayarit, México.

BACKGROUND: Octopus hubbsorum Berry, 1953 is the most important species for commercial fishing in the Mexican Pacific. However, there is a lack of information regarding population structure that could have important management implications. We tested 44 microsatellite loci in O. hubbsorum by cross-amplification from O. bimaculatus. METHODS AND RESULTS: Genetic diversity and structure was tested over 30 octopus sampled from Santa Cruz de Miramar (Nayarit, México). A total of 11 loci were successfully amplified. All loci were polymorphic with the number of effective alleles ranging from 2.13 to 23.14, while three loci significantly deviated from Hardy-Weinberg equilibrium. No significant LD was observed between pairs of loci (P ≥ 0.05). The application of the new markers in a O. hubbsorum population from Santa Cruz de Miramar Nayarit, México, did not showed Wahlund or isolate breaking effects due to the mixing of distinct populations. CONCLUSIONS: The loci were useful to estimate levels of pairwise relatedness and to discard the presence of recent demographic bottlenecks in the population. We consider that eight microsatellites are adequate from the 11 amplified loci.