Genomic Regions Associated with Resistance to Gastrointestinal Parasites in Australian Merino Sheep.

The objective of this study was to identify genomic regions and genes associated with resistance to gastrointestinal nematodes in Australian Merino sheep in Uruguay, using the single-step GWAS methodology (ssGWAS), which is based on genomic estimated breeding values (GEBVs) obtained from a combination of pedigree, genomic, and phenotypic data. This methodology converts GEBVs into SNP effects. The analysis included 26,638 animals with fecal egg count (FEC) records obtained in two independent parasitic cycles (FEC1 and FEC2) and 1700 50K SNP genotypes. The comparison of genomic regions was based on genetic variances (gVar(%)) explained by non-overlapping regions of 20 SNPs. For FEC1 and FEC2, 18 and 22 genomic windows exceeded the significance threshold (gVar(%) ≥ 0.22%), respectively. The genomic regions with strong associations with FEC1 were located on chromosomes OAR 2, 6, 11, 21, and 25, and for FEC2 on OAR 5, 6, and 11. The proportion of genetic variance attributed to the top windows was 0.83% and 1.9% for FEC1 and FEC2, respectively. The 33 candidate genes shared between the two traits were subjected to enrichment analysis, revealing a marked enrichment in biological processes related to immune system functions. These results contribute to the understanding of the genetics underlying gastrointestinal parasite resistance and its implications for other productive and welfare traits in animal breeding programs.

Identification of Candidate Genes and Pathways Linked to the Temperament Trait in Sheep.

Temperament can be defined as the emotional variability among animals of the same species in response to the same stimulus, grouping animals by their reactivity as nervous, intermediate, or calm. Our goal was to identify genomic regions with the temperament phenotype measured by the Isolation Box Test (IBT) by single-step genome-wide association studies (ssGWAS). The database consisted of 4317 animals with temperament records, and 1697 genotyped animals with 38,268 effective Single Nucleotide Polymorphism (SNP) after quality control. We identified three genomic regions that explained the greatest percentage of the genetic variance, resulting in 25 SNP associated with candidate genes on chromosomes 6, 10, and 21. A total of nine candidate genes are reported for the temperament trait, which is: PYGM, SYVN1, CAPN1, FADS1, SYT7, GRID2, GPRIN3, EEF1A1 and FRY, linked to the energetic activity of the organism, synaptic transmission, meat tenderness, and calcium associated activities. This is the first study to identify these genetic variants associated with temperament in sheep, which could be used as molecular markers in future behavioral research.

Nutritional strategies, performance, digestibility, and carcass traits of Santa Ines and Rabo Largo breeds in a tropical climate.

The aim of this study was to compare the performance, intake, digestibility, ruminal parameters, carcass traits, and the yield of commercial cuts of Santa Ines (SI) and Rabo Largo (RL) breeds fed diets with high or low roughage-to-concentrate ratio (R:C) under a tropical climate. Twenty lambs from each breed were individually housed in covered pens and fed the experimental diets for 58 days. The diets were formulated to meet the growth requirements of lambs with a roughage-to-concentrate ratio of 70:30 and 30:70. Significant interactions of breed × diet for nutrient intake were observed (P < 0.05), with SI lambs fed low R:C diet showing higher intake of dry matter, organic matter, crude protein, and total carbohydrates compared to RL lambs fed the same diet. SI lambs fed high R:C diet had higher intake of neutral detergent fiber than RL lambs (P < 0.05). SI lambs displayed better average daily gain and feed efficiency, regardless of diet (P < 0.05). Carcass traits and gastrointestinal components were influenced by breed and diet (P < 0.05). SI lambs fed low R:C diet showed higher subcutaneous fat thickness and better carcass finishing compared to RL lambs (P < 0.05). SI breed lambs exhibited better growth performance, carcass traits, and gastrointestinal characteristics, even when fed diets with a high roughage-to-concentrate ratio.

Image analysis to automatically classify anemia based on Famacha score in sheep using ocular conjunctiva images.

Haemonchus contortus is the most pathogenic blood-feeding parasitic in sheep, causing anemia and consequently changes in the color of the ocular conjunctiva, from the deep red of healthy sheep to shades of pink to practically white of non-healthy sheep. In this context, the Famacha method has been created for detecting sheep unable to cope with the infection by H. contortus, through visual assessment of ocular conjunctiva coloration. Thus, the objectives of this study were (1) to extract ocular conjunctiva image features to automatically classify Famacha score and compare two classification models (multinomial logistic regression-MLR and random forest-RF) and (2) to evaluate the applicability of the best classification model on three sheep farms. The dataset consisted of 1,156 ocular conjunctiva images from 422 animals. RF model was used to segment the images, i.e., to select the pixels that belong to the ocular conjunctiva. After segmentation, the quantiles (1%, 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, and 99%) of color intensity in each image channel (red, blue, and green) were determined and used as explanatory variables in the classification models, and the Famacha scores 1 (non-anemic) to 5 (severely anemic) were the target classes to be predicted (scores 1 to 5, with 162, 255, 443, 266, and 30 images, respectively). For objective 1, the performance metrics (precision and sensitivity) were obtained using MLR and RF models considering data from all farms randomly split. For objective 2, a leave-one-farm-out cross-validation technique was used to assess prediction quality across three farms (farms A, B, and C, with 726, 205, and 225 images, respectively). The RF provided the best performances in predicting anemic animals, as indicated by the high values of sensitivity for Famacha score 3 (80.9%), 4 (46.2%), and 5 (60%) compared to the MLR model. The precision of the RF was 72.7% for Famacha score 1 and 62.5% for Famacha score 2. These results indicate that is possible to successfully predict Famacha score, especially for scores 2 to 4, in sheep via image analysis and RF model using ocular conjunctiva images collected in farm conditions. As expected, model validation excluding entire farms in cross-validation presented a lower prediction quality. Nonetheless, this setup is closer to reality because the developed models are supposed to be used across farms, including new ones, and with different environments and management conditions.

Adaptive dynamics of indigenous sheep in Canary Islands, Spain: A machine learning approach.

The objective of the study was to characterize the adaptive profile of Ibero-American sheep of the Canaria breed, evaluating the possible changes in thermoregulatory responses and coat characteristics to which the animals are exposed in the different seasons of the year. Data collected over a period of 12 months were analyzed, with information being observed in the interval of 15 days of each month, in 23 adult ewes kept in an intensive breeding system. The rectal temperature (RT) of Canaria ewes was higher (P < 0.001) in the summer and spring seasons. In contrast, the respiratory rate (RR) of the animals was higher in autumn. The surface temperature (ST) of the herd was lower during the spring. It was observed that the hair length (HL) and the hair density (NH) did not vary during the seasons. However, the hair diameter (HD) and the coat thickness (CT) varied, being in the spring, the season in which the animals had the highest HD and autumn, the season in which they had the lowest. The performance was similar throughout the seasons (P > 0.05). The morphological variables of the coat presented 63.8% of original cases grouped, which may characterize the morphological responses of the coat of these animals as an important trait of the adaptive profile of the breed, whereas the opposite occurred for thermoregulatory responses. The variables most used by the herd and that were most important were autumn (CT, NH, HD, HR, RT, and HL), summer (ST and RR), spring (RR, ST, and RT), and winter (RT, HD, HR, and RR). Sheep of the Canaria breed have an adaptive profile that dynamically uses thermoregulatory and morphological responses, molding themselves according to climate changes resulting from seasonal periods on the Island of Tenerife, Spain. The Canaria sheep stood out for the modification of the morphological characteristics of the coat, especially during autumn and spring, and can be considered an excellent genetic resource with excellent adaptive characteristics for arid environments such as those found in the Canary Islands.

A genome-wide comparison between selected and unselected Valle del Belice sheep reveals differences in population structure and footprints of recent selection.

About three decades of breeding and selection in the Valle del Belìce sheep are expected to have left several genomic footprints related to milk production traits. In this study, we have assembled a dataset with 451 individuals of the Valle del Belìce sheep breed: 184 animals that underwent directional selection for milk production and 267 unselected animals, genotyped for 40,660 single-nucleotide polymorphisms (SNPs). Three different statistical approaches, both within (iHS and ROH) and between (Rsb) groups, were used to identify genomic regions potentially under selection. Population structure analyses separated all individuals according to their belonging to the two groups. A total of four genomic regions on two chromosomes were jointly identified by at least two statistical approaches. Several candidate genes for milk production were identified, corroborating the polygenic nature of this trait and which may provide clues to potential new selection targets. We also found candidate genes for growth and reproductive traits. Overall, the identified genes may explain the effect of selection to improve the performances related to milk production traits in the breed. Further studies using high-density array data, would be particularly relevant to refine and validate these results.

Toward assessing the role of dietary fatty acids in lamb's neurological and cognitive development.

Understanding and measuring sheep cognition and behavior can provide us with measures to safeguard the welfare of these animals in production systems. Optimal neurological and cognitive development of lambs is important to equip individuals with the ability to better cope with environmental stressors. However, this development can be affected by nutrition with a special role from long-chain fatty acid supply from the dam to the fetus or in lamb's early life. Neurological development in lambs takes place primarily during the first two trimesters of gestation. Through late fetal and early postnatal life, the lamb brain has a high level of cholesterol synthesis. This rate declines rapidly at weaning and remains low throughout adulthood. The main polyunsaturated fatty acids (PUFA) in the brain are ω-6 arachidonic acid and ω-3 docosahexaenoic acid (DHA), which are elements of plasma membranes' phospholipids in neuronal cells. DHA is essential for keeping membrane integrity and is vital for normal development of the central nervous system (CNS), and its insufficiency can damage cerebral functions and the development of cognitive capacities. In sheep, there is evidence that supplying PUFA during gestation or after birth may be beneficial to lamb productive performance and expression of species-specific behaviors. The objective of this perspective is to discuss concepts of ruminant behavior and nutrition and reflect on future research directions that could help to improve our knowledge on how dietary fatty acids (FA) relate to optimal neurological and cognitive development in sheep.

Classification Performance of Machine Learning Methods for Identifying Resistance, Resilience, and Susceptibility to Haemonchus contortus Infections in Sheep.

This study investigated the feasibility of using easy-to-measure phenotypic traits to predict sheep resistant, resilient, and susceptible to gastrointestinal nematodes, compared the classification performance of multinomial logistic regression (MLR), linear discriminant analysis (LDA), random forest (RF), and artificial neural network (ANN) methods, and evaluated the applicability of the best classification model on each farm. The database comprised 3654 records of 1250 Santa Inês sheep from 6 farms. The animals were classified into resistant (2605 records), resilient (939 records), and susceptible (110 records) according to fecal egg count and packed cell volume. A random oversampling method was performed to balance the dataset. The classification methods were fitted using the information of age class, the month of record, farm, sex, Famacha© degree, body weight, and body condition score as predictors, and the resistance, resilience, and susceptibility to gastrointestinal nematodes as the target classes to be predicted considering data from all farms randomly. An additional leave-one-farm-out cross-validation technique was used to assess prediction quality across farms. The MLR and LDA models presented good performances in predicting susceptible and resistant animals. The results suggest that the use of readily available records and easily measurable traits may provide useful information for supporting management decisions at the farm level.

Characterization of nonpathological intrascleral cartilage in the domestic sheep (Ovis aries) / Caracterização de cartilagem intraescleral não patológica em ovinos (Ovis aries)

Birds, cartilaginous and teleost fish, reptiles, and some amphibians have intrascleral cartilage and/or bone; however, these are rarely reported in therian mammals. This study aimed to investigate and characterize a nonpathological formation of cartilage in the posterior sclera of sheep macroscopically, histologically, and by immunohistochemical exam (IHC). Ninety eyes from 45 domestic sheep were collected, underwent gross examination, fixed in formalin, and embedded in paraffin for the microscopical assessment. Sections with histological shreds of cartilage were selected to perform IHC to confirm the presence of cartilage. Intrascleral cartilage was detected in 60 eyeballs (66.66%) from 37 sheep (82.22%). A slight whitish thickening was grossly seen in the posterior sclera. The histologic exam revealed a few scattered, isolated chondrocytes to larger aggregates of cartilaginous islands in the posterior sclera. Eighteen (30%) of 60 eyeballs revealed marked anti-collagen type II immunolabeling. The development of cartilaginous structures in the eyes is considered rare in mammalian animals. The high occurrence of intrascleral cartilage in the examined sheep eyes suggests that this finding corresponds to an anatomical component of sheep sclera, despite the age, breed, or body condition.

Aves, peixes cartilaginosos e teleósteos e répteis, bem como alguns anfíbios possuem cartilagem e/ou osso intraescleral, contudo, isso é raramente descrito em marsupiais. O objetivo deste trabalho foi investigar e caracterizar a formação não patológica de cartilagem hialina na esclera posterior de ovinos, por exame macroscópico, histológico e imuno-histoquímico. Olhos de 45 ovinos foram coletados, submetidos a exame macroscópico, fixados em formalina a 10% tamponada e incluídos em parafina para o exame histológico. Amostras com evidência de formação cartilaginosa ao exame histológico foram selecionadas para a realização da técnica de imuno-histoquímica para confirmação. Cartilagem intraescleral foi detectada em 60 amostras oculares (66,66%) de 37 ovinos (82,22%), caracterizada na avaliação macroscópica como discretos espessamentos esbranquiçados na esclera posterior. O exame histológico revelou formações que variaram de condrócitos isolados e dispersos a grandes agregados, formando ilhas cartilaginosas na esclera. Dezoito (30%) de 60 bulbos oculares mostraram imunomarcação anti-colágeno tipo II. O desenvolvimento de estruturas cartilaginosas nos bulbos oculares é considerado raro em mamíferos. A identificação de cartilagem intraescleral em 66% dos olhos ovinos avaliados no estudo indica que a formação de cartilagem corresponde a um componente anatômico normal na esclera de ovinos, independente de idade, raça ou condição corporal.

Curvas de crecimiento en ovino de pelo colombiano en los departamentos de Córdoba y Cesar, Colombia

La producción ovina en los últimos años en Colombia, se considera como una actividad con miras a exportación de carne, por lo cual, es necesario conocer el desempeño productivo de las diferentes razas dedicadas a este propósito en las regiones, con un número considerable de animales respecto al inventario nacional; por lo tanto, el objetivo de esta investigación fue describir el crecimiento en ovinos de pelo colombiano en los departamentos de Córdoba y Cesar, Colombia. Se utilizaron 99 animales de los biotipos Sudán y Etíope. Fueron evaluados los modelos Gompertz, Von Bertalanffy, Brody y Logístico. Los parámetros para obtener las curvas de crecimiento fueron estimados por medio del procedimiento NLIN de SAS. Utilizando el modelo de mejor ajuste, se determinó el porcentaje y la edad de madurez. El modelo Brody fue el que mejor ajustó los datos. El sexo no tuvo efecto significativo sobre los parámetros estimados, mientras que el biotipo racial fue significativo para todos los parámetros estimados, con la excepción de ß 1 ; la zona presentó efecto significativo sobre ß 0 y ß 2 y la época solo para ß 1. De acuerdo con los parámetros de la curva Brody estimados y a los porcentajes y edades a la madurez, en las poblaciones en estudio, se debe mejorar la alimentación de los animales e implementar un programa de selección, con el fin de mejorar los pesos de los animales, al llegar a la edad adulta.

Sheep production in recent years in Colombia is considered as an activity for the exportation of meat, therefore, it is necessary to know the productive performance of the different breeds dedicated to this purpose in the regions with a considerable number of animals with respect to national inventory. Therefore, the purpose of this research was to describe the growth in Colombian hair sheep in the departments of Cordoba and Cesar, Colombia. 99 animals of the Sudan and Ethiopian biotypes were used. The Gompertz, Von Bertalanffy, Brody and Logistic models were evaluated. The parameters of the growth curves were estimated by the procedure NLIN of SAS. Using the best fit model, the percentage and age of maturity were determined. The Brody model was the one that best fit the data. Sex had no significant effect on the estimated parameters, while racial biotype was significant for all estimated parameters, with the exception of ß 1; the zone presented a significant effect on ß 0 and ß 2; and the season only for ß 1. According to the estimated parameters of the Brody curve and the percentages and ages at maturity, in the populations under study, the feeding of the animals should be improved and a conduct a selection program, in order to improve the weights of the animals at reach adulthood.

Single-Step Protocol for Isolating the Recombinant Extracellular Domain of the Luteinizing Hormone Receptor from the Ovis aries Testis.

The luteinizing hormone receptor (LHR) is a glycoprotein member of the G protein-coupled receptors superfamily. It participates in corpus luteum formation and ovulation in females and acts in testosterone synthesis and spermatogenesis in males. In this study, we extracted RNA from sheep testicles and synthetized the cDNA to amplify the gene lhr-bed. This gene consists of 762 bp and encodes 273 amino acids of the extracellular domain of LHR. The lhr-bed was cloned into pJET1.2/blunt, then subcloned into pCOLD II, and finally, transformed in E. coli BL21 (DE3) cells. Because the induced rLHR-Bed protein was found in the insoluble fraction, we followed a modified purification protocol involving induction at 25 °C, subjection to denaturing conditions, and on-column refolding to increase solubility. We confirmed rLHR-Bed expression by means of Western blot and mass spectrometry analysis. It is currently known that the structure stem-loop 5'UTR on pCOLD II vector is stable at 15 °C. We predicted and obtained RNAfold stability at 25 °C. We successfully obtained the recombinant LHR extracellular domain, with protein yields of 0.2 mg/L, and purity levels of approximately 90%, by means of a single chromatographic purification step. The method described here may be used to obtain large quantities of rLHR-Bed in the future.

New Insight into the Genome-Wide Diversity and Admixture of Six Colombian Sheep Populations.

Creole sheep represent a strategic genetic resource for populations living in marginal areas under financial restrictions on the American continent. Six Colombian sheep breeds (two wool (BCL-Boyacá and NCL-Nariño, 12 and 14 samples) and four hair (OPCE-Ethiopian, 54 samples; OPCS-Sudan, 74 samples; OPCP-Pelibeuy, 59 samples; OPCW-Wayúu, 24 samples) were genotyped using the Illumina Ovine SNP50 BeadChip. Data was also included from international 44 breeds from International Sheep Genomics Consortium (ISGC) and from data published in previous a previous work on the Caribbean and African breeds. Although geographically separated, wool (NCL, BCL) and hair types (OPCE, OPCS, OPCW) presented little genetic differentiation (FST 0.05) at a global level but several groups of animals separated suggesting local clustering due to geographical isolation. The OPCP underwent a recent crossing with Mexican Pelibuey, explaining its differentiation. Findings in this work such as the proximity to West African Djallonké (WAD) and Barbados Black Belly (BBB), suggest different introductions of African type animals from the Caribbean region on a pre-existing genetic basis formed by animals deriving from the first importations coming from Europe in colonial times. As expected, Colombian wool breeds showed, in particular in Admixture software results, a greater genomic component in common with European breeds and in particular with Iberian ones (Churra). This study provides a basis for future research into the genetic diversity within and between the Colombian sheep breeds analysed, and scientific data for policy decisions on Farm Animal Genetic Resources (FAnGR).

Neosporosis in sheep: A systematic review and meta-analysis of global seroprevalence and related risk factors.

Neosporosis is recognized as the main cause of abortions in cattle worldwide and there is an increasing concern about its role in ovine reproductive losses; however, epidemiological studies regarding neosporosis in sheep are still limited. This meta-analysis aimed to estimate the global pooled seroprevalence and associated risk factors of ovine neosporosis. In the current report, a comprehensive strategy of search and data collection from 7 worldwide databases was performed. A final set of 73 studies (80 datasets) published from 2000 to 2021 were selected based on inclusion criteria, comprising data on 35,740 sheep (corresponding to 37,565 evaluated samples) from 30 countries worldwide. The global pooled seroprevalence of Neospora caninum infection in sheep estimated by the random-effects model was 13% (95% CI, 10-15) and showed high heterogeneity (Q = 5147.15, I2 = 98%, p< 0.001). Furthermore, by meta-analyses of subgroups it was demonstrated for the first time that seroprevalence significantly varied between continents (highest in Africa; 20%, 95% CI, 4-44), WHO regions (highest in African Region; 42%, 95% CI, 36-48), countries (highest in Colombia; 79%, 95% CI, 61-92%) and diagnostic methods (highest by IFAT; 17%, 95% CI, 12-23). Meta-regression indicated significant increasing trends in the prevalence of ovine neosporosis with decrease in geographical latitude (coefficient = -0.013; p<0.001), whereas longitude did not influence it (coefficient = -0.001; p=0.365). Regarding associated risk factors, older sheep were more likely to be infected with N. caninum than younger ones (OR 1.42; 95% CI 1.08-1.87), and sheep bred under intensive or semi-intensive systems resulted less susceptible to be seropositive than those bred under extensive system (OR 0.65; 95% CI 0.42-0.99 and OR 0.74; 95% CI 0.62-0.89, respectively). Conversely, no apparent association was found between seroprevalence and other variables, such as sex (OR 1.06; 95% CI 0.9-1.24), the presence of dogs on the farm (OR 1.15; 95% CI 0.63-2.12) or the presence of abortion (OR 1.80; 95% CI 0.87-3.74). In conclusion, the seroprevalence of ovine neosporosis is widely and heterogeneously distributed throughout the world, and it is negatively associated with increasing geographical latitude. In addition, age and extensive production system represent risk factors, which suggest that the horizontal transmission route is relevant for this host species. It is recommended to pay more attention to this disease and emphasize the global need for more indexed studies concerning the seroprevalence and risk factors of ovine neosporosis to better understand the epidemiology of this coccidian infection.

Major differences between single or twin hair lambs in the immediate postpartum period: Metabolic and thermodynamic patterns detected by infrared thermography.

The objective was to evaluate the differences between hair lambs, born from single or twin births, regarding the latency periods for standing up and suckling, the vitality, glycemic, cortisol, and triiodothyronine concentrations, as well as the phenotypic characteristics related to the maintenance of homeothermy in the immediate postpartum. Single (n = 10) or twin (n = 12) Morada Nova lambs were evaluated after birth, during the first successful suckling (M0 = Timepoint 0), and at regular intervals of 20 min (M20, M40, M60). Lambs from single births had higher birth weight (3.09 vs 2.58 kg; P ≤ 0.05) and higher serum triiodothyronine concentration (267 vs 209 ng/dL; P ≤ 0.05) compared to twin lambs. There was a positive correlation between weight and blood glucose (0.57; P ≤ 0.05) for both single and twin lambs. The type of birth did not affect vitality, which was negatively associated with cortisol concentration (-0.53; P ≤ 0.05). Twin lambs had higher internal and ocular temperatures (39.29 vs 38.67 °C and 38.84 vs 38.13 °C; P ≤ 0.05, respectively). Body surface temperatures increased over time in both groups (P ≤ 0.05). An increase in the temperature of the hips region (ysingle = 27.88 + 0.019*time; R2 = 0.96; P = 0.019 and ytwin = 28.74 + 0.019*time; R2 = 0.94; P = 0.029) was observed for both single and twin lambs, which coincides with the region of brown adipose tissue deposition. The lowest absolute thermal variabilities between twin and single lambs in M0 and M60 were recorded in the midloin and integral dorsal area. The parturition type did not influence the latencies to stand up (P = 0.908) and for the first suckling (P = 0.888), and the vitality score (P = 0.353). Thus, single and twin lambs do not differ in neonatal behavior, but they presented specific metabolic strategies to regulate body temperature over time. Midloin and integral dorsal areas are anatomical regions suggested for use in serial thermographic monitoring. Infrared thermography may be an important complementary resource in neonatal care.

Impacts of short-term water restriction on Pelibuey sheep: physiological and blood parameters.

One of the projected effects of climate change is a reduction in rainfall in certain regions of the world. Hence, the agricultural and livestock sectors will have to cope with increasing incidences of water shortage while still maintaining productivity levels to feed an ever increasing global population. This short communication reports on the effect of a 2-week water stress on Pelibuey sheep in Cuba. Three treatments were compared, viz. supply of water ad libitum, water supplied once every 3 or 6 days. Following exposure to the water stress, the results showed no changes in sheep body weight or rectal temperature. However, respiration frequency was affected with water stress causing a reduction from 23.3 to 13.3 respirations per min in control and water-deprived animals, respectively. Furthermore, there was evidence for hemoconcentration in response to water stress (levels of hemoglobin increased from 9.2 to 13.1 g L-1 and hematocrits from 27.6 to 39.3% in the control group and animals restricted to water once every 6 days. The imposed water stress was also evident in the reduction of lymphocytes (from ±63 to 43%), and in increase of neutrophils (from approximately 38 to 54%) and leukocytes (from 3133 to 4933 per mm3). The results indicated a decline in the levels of antioxidants, i.e., SOD from approximately 13 to 10 U mg-1 protein and CAT activity from 23 to 9 U mg-1 protein. To the best of our knowledge, this is the first report on the response of Pelibuey sheep to short-term water shortage stress under Cuban environmental conditions.

Lentivirus Susceptibility in Brazilian and US Sheep with TMEM154 Mutations.

Small ruminant lentiviruses (SRLVs) affect sheep and goats worldwide. The major gene related to SRLV infections is the Transmembrane Protein Gene 154 (TMEM154). We estimated the haplotype frequencies of TMEM154 in the USA (USDA-ARS) and Brazil (Embrapa) Gene Banks by using two different SNP genotyping methodologies, FluidigmTM and KASPTM. We also genotyped the ZNF389_ss748775100 deletion variant in Brazilian flocks. A total of 1040 blood samples and 112 semen samples from 15 Brazilian breeds were genotyped with Fluidigm for the SNP ZNF389_ss748775100 and 12 TMEM154 SNPs. A total of 484 blood samples from the Santa Inês breed and 188 semen samples from 14 North American sheep breeds were genotyped with KASP for 6 TMEM154 SNPs. All the Brazilian samples had the "I/I" genotype for the ZNF389_ss748775100 mutation. There were 25 TMEM154 haplotypes distributed across the Brazilian breeds, and 4 haplotypes in the US breeds. Haplotypes associated with susceptibility were present in almost all breeds, which suggests that genetic testing can help to improve herd health and productivity by selecting non-susceptible animals as founders of the next generations. Fluidigm and KASP are reliable assays when compared with Beadchip arrays. Further studies are necessary to understand the unknown role of TMEM154 mutations, host-pathogen interaction and new genes associated with the clinical condition.

Chemical profile colostrum, quality refrigerated and frozen milk of santa inês sheep / Perfil químico do colostro, qualidade do leite refrigerado e congelado de ovelhas santa inês

The chemical composition of Santa Inês sheep colostrum was evaluated, as well as chilled milk (zero to 240 hours) and frozen milk for up to 70 days. Results of chemical composition (fat, protein, casein, lactose, total and degreased dry extract) and colostrum somatic cell count (SCC) were presented descriptively. The results of chemical composition and SCC and total bacterial count (TBC) of chilled and frozen milk were evaluated in a completely randomized design, the repetition of milk collection days and the treatments of the times when the milk was chilled and frozen. The comparison of the quality averages of chilled and frozen milk was performed by Tukey test, with a probability of 5.0 %. Santa Inês sheep colostrum showed high protein and fat content, demonstrating a high source of nutrients for lamb nutrition. Santa Inês sheep's milk can be stored for up to 240 hours without changes in chemical quality. Frozen milk from Santa Inês ewes for up to 70 days minus fat content; however, this form of milk preservation is viable. Refrigeration and freezing are alternatives that add value to the milk of Santa Inês ewes, but studies with previous preservation methods are necessary for greater quality assurance.

Avaliou-se a composição química do colostro de ovinos Santa Inês, leite refrigerado (zero a 240 horas) e leite congelado por até 70 dias. Os resultados de composição química (gordura, proteína, caseína, lactose, extrato seco total e desengordurado) e contagem de células somáticas do colostro (CCS) foram apresentados de forma descritiva. Os resultados da composição química, CCS e da contagem bacteriana total (CBT) do leite refrigerado e congelado foram avaliados em delineamento inteiramente casualizado. As repetições foram os dias de coleta do leite e os tratamentos os tempos em que o leite foi refrigerado e congelado. A comparação das médias de qualidade do leite resfriado e congelado foi realizada pelo teste de Tukey, com probabilidade de 5,0 %. O colostro de ovinos Santa Inês apresentou alto teor de proteína e gordura, demonstrando ser uma grande fonte de nutrientes para a nutrição de cordeiros. O leite de ovelha Santa Inês pode ser armazenado sob refrigeração por até 240 horas sem alterações da composição química. O leite congelado de ovelhas Santa Inês pode ser armazenado por até 70 dias, contudo ocorre alteração da composição química, principalmente nos teores de gordura. A refrigeração e o congelamento são alternativas que agregam valor ao leite de ovelhas Santa Inês, porém, mais estudos com estes métodos de preservação, são necessários para maior garantia de qualidade.

Nutritional and metabolic parameters of ewe lambs fed yeast in the diet containing fibrolytic enzyme / Parâmetros nutricionais e metabólicos de borregas alimentadas com leveduras na ração contendo enzima fibrolítica

This study aimed to evaluate the dry matter digestibility, intake and metabolic profile of ewe lambs fed active or inactive yeasts in the diet containing fibrolytic enzyme. Twenty crossbred animals with an average weight of 33.4kg and an average age of six months were distributed in a completely randomized design. The treatments consisted of yeasts: Control (no yeast), Milk Sacc X® (active yeast), Active Flora®(active yeast + inactive yeast) and Rumen Yeast®(inactive yeast). Analysis of variance and SNK test were applied with a significance level of 5% for type I error. There was no difference for dry matter intake between treatments (P>0.05). There was a significant trend (P=0.0596) for dry matter digestibility, with higher values for the control treatment. There was a significant trend for blood metabolites (P=0.0705), in which the diet containing Milk Sacc® was superior to the other treatments for total protein concentration. In addition, there was a statistical difference (P<0.05) for urea concentration, in which control and Active Flora® treatments were superior to the others. The inclusion of active or inactive yeasts in the diet for ewe lambs containing fibrolytic enzyme reduces dietary digestibility, without affecting the dry matter intake, in addition, it increases urea and total protein levels without causing liver or kidney damage in ewe lambs.

Objetivou-se avaliar a digestibilidade da matéria seca, consumo e perfil metabólico de borregas alimentadas com leveduras vivas e inativadas na ração contendo enzima fibrolítica. Foram utilizados vinte animais mestiços com peso médio de 33,4kg e idade média de seis meses, distribuídas em delineamento inteiramente casualizado. Os tratamentos consistiram nas leveduras: Controle (sem levedura), Milk Sacc X® (levedura ativa), Active Flora®(levedura viva mais levedura inativada) e Rúmen Yeast® (levedura inativa). Foi realizada à análise variância e teste SNK com nível de significância de 5% para o erro tipo I. Não houve diferença entre tratamentos para consumo de matéria seca com uso ou não de levedura na dieta (P>0,05). Houve tendência significativa (P=0,0596) para a digestibilidade da matéria seca sendo superior para com o tratamento sem inclusão de leveduras. Para os metabólitos sanguíneos houve tendência significativa (P=0,0705) sendo o Milk Sacc® superior aos demais tratamentos para concentração de proteínas totais. Além disso, houve diferença estatística (P<0,05) para concentração de ureia cujos tratamentos controle e Active Flora® foram superiores aos demais. A inclusão de leveduras vivas ou inativadas na dieta para borregas contendo enzima fibrolítica diminui a digestibilidade da dieta, sem afetar o consumo de matéria seca, além disso, aumenta teores de ureia e proteínas totais sem causar prejuízos hepáticos ou renais as borregas.

Exogenous enzymes in sheep diet: nutritional and physiological parameters

The objective of this study was to evaluate the effect of adding exogenous enzymes to the diet on nutrient intake and digestibility, nitrogen balance, ingestive behavior and rumen movement of ewe lambs. Five ewe lambs, Dorper x Santa Inês crossbred, with an average age of 7 ± 1 months, average weight of 36.40 ± 2.36 kg were assigned in a 5x5 Latin square design. The treatments consisted of adding exogenous enzymes to the concentrate: Allzyme, Fibrozyme®, Amaize®, Mix and Control. Analyses of variance were applied and means were compared by the SNK test, and non-parametric Kruskal Wallis test at 5% significance. The dry matter intake in relation to body weight, crude protein intake and nitrogen intake were higher with the use of amylolytic enzyme compared to the other treatments (p <0.05). Nitrogen balance was higher with the use of amylolytic enzymes and the Allzyme® enzyme complex (p <0.05). A longer time spent in total chewing was observed with the inclusion of fibrolytic and amylolytic enzymes without changes in rumen movement. The use of exogenous enzymes promotes better use of nutrients, with high digestibility of dry matter, neutral detergent fiber and crude protein.(AU)

Detection and Visualization of Heterozygosity-Rich Regions and Runs of Homozygosity in Worldwide Sheep Populations.

In this study, we chose 17 worldwide sheep populations of eight breeds, which were intensively selected for different purposes (meat, milk, or wool), or locally-adapted breeds, in order to identify and characterize factors impacting the detection of runs of homozygosity (ROH) and heterozygosity-rich regions (HRRs) in sheep. We also applied a business intelligence (BI) tool to integrate and visualize outputs from complementary analyses. We observed a prevalence of short ROH, and a clear distinction between the ROH profiles across populations. The visualizations showed a fragmentation of medium and long ROH segments. Furthermore, we tested different scenarios for the detection of HRR and evaluated the impact of the detection parameters used. Our findings suggest that HRRs are small and frequent in the sheep genome; however, further studies with higher density SNP chips and different detection methods are suggested for future research. We also defined ROH and HRR islands and identified common regions across the populations, where genes related to a variety of traits were reported, such as body size, muscle development, and brain functions. These results indicate that such regions are associated with many traits, and thus were under selective pressure in sheep breeds raised for different purposes. Interestingly, many candidate genes detected within the HRR islands were associated with brain integrity. We also observed a strong association of high linkage disequilibrium pattern with ROH compared with HRR, despite the fact that many regions in linkage disequilibrium were not located in ROH regions.