Novel land uses shape meta-community structures in neighbouring native forests: Dataset across Uruguay.

The presented datasets relate to the research article entitled "Native forest meta-community structures in Uruguay shaped by novel land use types in their surroundings" [Ramírez and Säumel; Ecology and Evolution, 2022]. The datasets include field survey data on woody species presence and absence from 384 plots at 32 permanent monitoring sites of native forests across the Oriental Republic of Uruguay (South America). We compiled different methods from meta-community studies, remote sensing and landscape ecology to explore how woody species communities are influenced by land use change from local to regional scale. We describe the diverse woody species composition in native forests across Uruguay and structure of metacommunities of woody species. Data on woody species diversity inform landscape planning, land-use management, policy and governance and can be used for further meta-analysis with other local, regional or global data sets.

Native forest metacommunity structures in Uruguay shaped by novel land-use types in their surroundings.

We explore the effect of land-use change from extensively used grasslands to intensified silvi- and agricultural monocultures on metacommunity structure of native forests in Uruguay. We integrated methods from metacommunity studies, remote sensing, and landscape ecology to explore how woody species distribution was influenced by land-use change from local to regional scale. We recorded richness and composition of adult and juvenile woody species from 32 native forests, created land-use maps from satellite image to calculate spatial metrics at landscape, class, and patch levels. We also analyzed the influence of land use pattern, climate, topography, and geographic distance between sites (d) on metacommunity, and created maps to visualize species richness and (dis)similarity between communities across the country. Woody species communities were distributed in a discrete pattern across Uruguay. Precipitation and temperature seasonality shaped species distribution pattern. Species richness and community dissimilarity increased from West to East. Latitude did not influence these patterns. Number of patches, landscape complexity, and interspersion and juxtaposition indexes determine woody species distribution at landscape level. Increasing areas covered by crops and timber plantation reduced species richness and increased community dissimilarity. The spatial metrics of native forest fragments at patch level did not influence metacommunity structure, species richness, and community dissimilarity. In conclusion, Uruguayan native forests display a high range of dissimilarity. Pressure of neighborhood land uses was the predominant factor for species assemblages. Conserving landscape structures that assure connectivity within and among native forest patches is crucial. On sites with rare target species, the creation of alliances between governmental institution and landowner complemented by incentives for biodiversity conservation provides opportunities to advance in species protection focused on those less tolerant to land-use change.

Fragmentation and matrix contrast favor understory plants through negative cascading effects on a strong competitor palm.

Understanding the patterns and processes driving biodiversity maintenance in fragmented tropical forests is urgently needed for conservation planning, especially in species-rich forest reserves. Of particular concern are the effects that habitat modifications at the landscape scale may have on forest regeneration and ecosystem functioning: a topic that has received limited attention. Here, we assessed the effects of landscape structure (i.e., forest cover, open area matrices, forest fragmentation, and mean inter-patch isolation distance) on understory plant assemblages in the Los Tuxtlas Biosphere Reserve, Mexico. Previous studies suggest that the demographic burst of the strong competitor palm Astrocaryum mexicanum in the core area of this reserve limits plant recruitment and imperils biodiversity conservation within this protected area. Yet, the local and landscape predictors of this palm, and its impact on tree recruitment at a regional scale are unknown. Thus, we used structural equation modeling to assess the direct and cascading effects of landscape structure on stem and species density in the understory of 20 forest sites distributed across this biodiversity hotspot. Indirect paths included the effect of landscape structure on tree basal area (a proxy of local disturbance), and the effects of these variables on A. mexicanum. Density of A. mexicanum mainly increased with decreasing both fragmentation and open areas in the matrix (matrix contrast, hereafter), and such an increase in palm density negatively affected stem and species density in the understory. The negative direct effect of matrix contrast on stem density was overridden by the indirect positive effects (i.e., through negative cascading effects on A. mexicanum), resulting in a weak effect of matrix contrast on stem density. These findings suggest that dispersal limitation and negative edge effects in more fragmented landscapes dominated by open areas prevent the proliferation of this palm species, enhancing the diversity and abundance of understory trees. This "positive" news adds to an increasing line of evidence suggesting that fragmentation may have some positive effects on biodiversity, in this case by preventing the proliferation of species that can jeopardize biodiversity conservation within tropical reserves.

Landscape-level effects on aboveground biomass of tropical forests: A conceptual framework.

Despite the general recognition that fragmentation can reduce forest biomass through edge effects, a systematic review of the literature does not reveal a clear role of edges in modulating biomass loss. Additionally, the edge effects appear to be constrained by matrix type, suggesting that landscape composition has an influence on biomass stocks. The lack of empirical evidence of pervasive edge-related biomass losses across tropical forests highlights the necessity for a general framework linking landscape structure with aboveground biomass. Here, we propose a conceptual model in which landscape composition and configuration mediate the magnitude of edge effects and seed-flux among forest patches, which ultimately has an influence on biomass. Our model hypothesizes that a rapid reduction of biomass can occur below a threshold of forest cover loss. Just below this threshold, we predict that changes in landscape configuration can strongly influence the patch's isolation, thus enhancing biomass loss. Moreover, we expect a synergism between landscape composition and patch attributes, where matrix type mediates the effects of edges on species decline, particularly for shade-tolerant species. To test our conceptual framework, we propose a sampling protocol where the effects of edges, forest amount, forest isolation, fragment size, and matrix type on biomass stocks can be assessed both collectively and individually. The proposed model unifies the combined effects of landscape and patch structure on biomass into a single framework, providing a new set of main drivers of biomass loss in human-modified landscapes. We argue that carbon trading agendas (e.g., REDD+) and carbon-conservation initiatives must go beyond the effects of forest loss and edges on biomass, considering the whole set of effects on biomass related to changes in landscape composition and configuration.

Influence of landscape structure on Euglossini composition in open vegetation environments / Influência da estrutura da paisagem na composição de Euglossini em ambientes com vegetação aberta

Abstract The fauna of Euglossini bees is poorly known in savanna regions, making it difficult to understand how these bees use open vegetation environments. The aim of this study was to evaluate the influence of landscape structure on species abundance and composition of Euglossini bees in naturally heterogeneous savanna landscapes. Nine sites were sampled monthly using six traps with chemical baits. Three aromatic essences (eucalyptol, methyl salicylate and vanillin) were used to attract the Euglossini. Surrounding environmental conditions were measured using three independent variables, calculated in multiple scales: index of local vegetation and two landscape indices (Shannon Diversity and area-weighted shape). We compared the competing hypotheses through model selection based on Second-order Akaike Information Criterion (AICc). The four competing hypothesis were: (1) The local vegetation complexity favors Euglossini bees species richness and/or abundance (local vegetation hypothesis); (2) The proportion of the native vegetation types favors Euglossini bees species richness and/or abundance (habitat amount hypothesis); (3) Higher landscape diversity shall increase species richness of Euglossini bees (landscape heterogeneity hypothesis); (4) More complex landscape configuration shall favor the Euglossini bees richness and/or abundance (landscape heterogeneity hypothesis). We sampled 647 individuals belonging to six species of two distinct genera. Our results support the habitat amount hypothesis since bees’ abundance was strongly related with the proportion of habitat in the surrounding landscape. This may be related to the availability of floral and nesting resources in some types of savanna vegetation.

Resumo A fauna das abelhas da tribo Euglossini é pouco conhecida em regiões de savana, tornando difícil a compreensão de como essas abelhas usam ambientes com vegetação aberta. O objetivo desse estudo foi avaliar a influência da estrutura da paisagem na abundância e composição de espécies de abelhas Euglossini em paisagens naturalmente heterogêneas de savana. Nove locais foram amostrados mensalmente utilizando seis armadilhas com iscas químicas. As essências eucaliptol, salicilato de metila e vanilina foram utilizadas para atrair os machos de Euglossini. As condições ambientais foram medidas usando três variáveis, calculadas em múltiplas escalas: índice de vegetação local e dois índices de paisagem (diversidade de Shannon e o índice de forma ponderado pela área). Através da seleção de modelos baseada no critério de informação de Akaike de segunda ordem (AICc) comparamos as hipóteses alternativas: (1) Vegetação local mais complexa favorece as abelhas Euglossini (hipótese da vegetação local); (2) A proporção dos tipos de vegetação nativas favorece as abelhas Euglossini (hipótese da quantidade habitat); (3) A diversidade da paisagem favorece a riqueza de espécies de abelhas Euglossini (hipótese da heterogeneidade da paisagem); (4) Configuração mais complexa da paisagem favorece a riqueza e/ou abundância de abelhas Euglossini (hipótese da heterogeneidade paisagem). Nós amostramos 647 indivíduos pertencentes a seis espécies de dois gêneros distintos. Nossos resultados apoiam a hipótese de quantidade de habitat já que a abundância das abelhas foi fortemente relacionada com a proporção de habitat nas paisagens circundantes. Esses resultados podem estar relacionados com a disponibilidade de recursos florais e substratos para nidificação em alguns tipos de savana.

Efectos de la estructura del paisaje y de la vegetación en la diversidad de murciélagos filostómidos (Chiroptera: Phyllostomidae) de Oaxaca, México / Effects of landscape and vegetation structure on the diversity of phyllostomid bats (Chiroptera: Phyllostomidae) in Oaxaca, Mexico

The tropical forest fragmentation is known to affect the spatial structure of the landscape and habitat. These alterations can modify the attributes of bat assemblages, however, this phenomenon has been little studied and understood. In this work we evaluated the structure of landscape (i.e. composition and configuration) and vegetation, and its relationship with assemblage- and population-level characteristics of phyllostomid bats in a tropical rainforest of Southeastern Mexico. For this, we previously selected 12 sites located in continuous and fragmented forests, where bats were captured using mist nets during a two years sampling effort (144 nights). Bats relative abundance, species richness (diversity of order 0, 0D), Shannon diversity index (¹D) and Simpson index (²D) were evaluated in all sites, and their relationship with seven measures of landscape structure and seven measures of vegetation structure was described using a Hierarchical Partitioning Analysis. A total of 1 840 individuals of 29 species of phyllostomid bats were captured in this period. Differences in the assemblages were manifested only in the relative abundance and not in the richness of the species. The assemblages of fragmented forest exhibited greater variation in species composition and a greater abundance of frugivorous and nectarivorous bats in comparison with the assemblages of continuous forest. The landscape configuration was related to the assemblage- and population-level attributes, contrasting with previous studies where the composition was a key element. At habitat level, tree density and canopy cover determined the abundance of bats. Nectarivorous and frugivorous bats were mostly found in disturbed vegetation landscapes, primarily due to landscape configuration (e.g. edge density). This phenomenon could be a response to the availability of food in primary and intermediate successional stages, which are characterized by an abun-dance of food value.

La fragmentación de bisques tropicales altera la estructura especial del paisaje y del habitat . Estas alteraciones pueden modificar los atributos de las agregaciones de murciélagos, sin embargo este fenómeno ha sido poco estudiado y comprendido. Se evaluó la estructura del paisaje (i.e. composición y configuración) y vegetación, y sus relaciones con características a nivel de agregación (ensamble) y población de murciélagos filostómidos en una selva tropical del sureste de México. Se encontró que las modificaciones en las agregaciones solo se manifiestan en la abundancia relativa y no en la riqueza de especies. La configuración del paisaje fue un elemento relacionado con los atributos a nivel de ensamble y de población, contrastando con estudios previos donde la composición fue un elemento clave. A nivel de hábitat se encontró que la densidad arbórea y cobertura del dosel determinan la abundancia de murciélagos. Los murciélagos nectarívoros y frugívoros prefieren paisajes con vegetación alterada y están relacionados principalmente con la configuración del paisaje. Este fenómeno podría ser una respuesta a la disponibilidad de alimento en ambientes sucesionales primarios e intermedios, que se caracterizan por una alta proliferación de plantas con potencial alimenticio.