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1.
Methods Enzymol ; 295: 316-30, 1998.
Artigo em Inglês | MEDLINE | ID: mdl-9750225

RESUMO

We have described two examples of time-resolved photoacoustic calorimetry for the study of heme protein transient intermediates. Before photoacoustic calorimetry, determining thermodynamic information on short-lived intermediates was difficult. Along with being sensitive to enthalpic and volume changes, photoacoustic calorimetry can detect conformational changes in a time-resolved manner. In complex protein systems, the interpretation of the structural origins of a conformational change is sometimes difficult. Site-directed mutagenesis has been used successfully to identify the residues that play important roles in the ligand binding to both Mb and cytochrome P450cam. In both systems the hydration state of salt bridges gave rise to volume changes that were identified through mutagenesis of the residues involved. With its increasing popularity and the power of site-directed mutagenesis, time-resolved photoacoustic calorimetry is fast becoming a technique to probe conformational dynamics in proteins.


Assuntos
Calorimetria/métodos , Hemeproteínas/química , Acústica/instrumentação , Calorimetria/instrumentação , Cânfora 5-Mono-Oxigenase/química , Cânfora 5-Mono-Oxigenase/efeitos da radiação , Hemeproteínas/efeitos da radiação , Lasers , Modelos Químicos , Mioglobina/química , Mioglobina/efeitos da radiação , Fotólise , Termodinâmica , Transdutores
2.
Biochemistry ; 37(13): 4317-24, 1998 Mar 31.
Artigo em Inglês | MEDLINE | ID: mdl-9556346

RESUMO

Step-scan time-resolved Fourier transform infrared spectroscopy with a time resolution of 5 micros was applied to the carbon monoxide complex of cytochrome P-450cam (CYP101) to study the bimolecular ligand-rebinding process after flash photolysis. Spectral changes in the CO ligand stretch vibration band and in the protein amide I' band were monitored simultaneously. In substrate complexes having the camphor C-8, C-9, and C-10 methyl groups, rebinding of the ligand and the relaxation of the protein proceed at the same rate within experimental errors. For substrate complexes missing the methyl groups, the relaxation fo the protein tends to relax slightly faster than the CO ligand rebinding to the heme iron. compared to the (1R)-camphor and the camphane complex, the bimolecular rebinding rate constant for P-450 bound with substrates lacking the methyl groups are increased by a factor of 10-40. An unusual signal at about 1719 cm-1 was found in the difference spectrum of the photolyzed minus nonphotolyzed CO complex which has not ben reported for other heme proteins so far. This signal is strongly pronounced in wild-type P-450cam bound with (1R)-camphor or camphane and in the D251N mutant bound with (1R)-camphor. In contrast, substrate-free P-450 and the norbornane and norcamphor complexes reveal only a very weak signal or a changed band shape. On the basis of the crystal structure data, we suggest that this signal originates from the rearrangement of the hydrogen-bonding pattern or the protonation state of the salt link between Asp297, Arg299, and the heme propionate group.


Assuntos
Cânfora 5-Mono-Oxigenase/química , Monóxido de Carbono/química , Canfanos/metabolismo , Cânfora/metabolismo , Cânfora 5-Mono-Oxigenase/metabolismo , Cânfora 5-Mono-Oxigenase/efeitos da radiação , Monóxido de Carbono/metabolismo , Monóxido de Carbono/efeitos da radiação , Cinética , Ligantes , Modelos Moleculares , Norbornanos/metabolismo , Fotólise , Conformação Proteica , Espectroscopia de Infravermelho com Transformada de Fourier/métodos , Especificidade por Substrato
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