Phylogenomics uncovers early hybridization and adaptive loci shaping the radiation of Lake Tanganyika cichlid fishes.

Lake Tanganyika is the oldest and phenotypically most diverse of the three East African cichlid fish adaptive radiations. It is also the cradle for the younger parallel haplochromine cichlid radiations in Lakes Malawi and Victoria. Despite its evolutionary significance, the relationships among the main Lake Tanganyika lineages remained unresolved, as did the general timescale of cichlid evolution. Here, we disentangle the deep phylogenetic structure of the Lake Tanganyika radiation using anchored phylogenomics and uncover hybridization at its base, as well as early in the haplochromine radiation. This suggests that hybridization might have facilitated these speciation bursts. Time-calibrated trees support that the radiation of Tanganyika cichlids coincided with lake formation and that Gondwanan vicariance concurred with the earliest splits in the cichlid family tree. Genes linked to key innovations show signals of introgression or positive selection following colonization of lake habitats and species' dietary adaptations are revealed as major drivers of colour vision evolution. These findings shed light onto the processes shaping the evolution of adaptive radiations.

Hipocrecimiento severo y síndrome 2q37 / Severe low growth and 2q37 syndrome

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The relevance of purebred information for predicting genetic merit of survival at birth of crossbred piglets.

The objective of this study was to infer (co)variance components for piglet survival at birth in purebred and crossbred pigs. Data were from 13,643 (1,213 litters) crossbred and 30,919 (3,162 litters) purebred pigs, produced by mating the same 168 purebred boars to 460 Large White-derived crossbred females and 1,413 purebred sows, respectively. The outcome variable was piglet survival at birth as a binary trait. A Bayesian bivariate threshold model was implemented via Gibbs sampling. Flat priors were assigned to the effects of sex, parity of the dam, litter size, and year-month of birth. Gaussian priors were assigned to litter, dam, and sire effects. Marginal posterior means (SD) of the sire and dam variances for liability of piglet survival in purebred were 0.018 (0.008) and 0.077 (0.020), respectively. For crossbred, sire and dam variance estimates were 0.030 (0.018) and 0.120 (0.034), respectively. The posterior means (SD) of the heritability of liability of survival in purebred and crossbred and of the genetic correlation between these traits were 0.049 (0.023), 0.091 (0.054), and 0.248 (0.336), respectively. The greatest 95% confidence region (-0.406, 0.821) for the genetic correlation between purebred and crossbred liabilities of piglet survival included zero. Results suggest that the expected genetic progress for piglet survival in crossbreds when selection is based on purebred information may be nil.

Photosynthetic and biochemical activities in flag leaves of a newly developed superhigh-yield hybrid rice (Oryza sativa) and its parents during the reproductive stage.

Responses of net photosynthetic rates to intercellular CO(2) concentration (P (n)/C (i) curves) and photochemical characteristics were investigated in flag leaves of newly developed superhigh-yield hybrid rice (Oryza sativa L.) LiangYouPeiJiu (LYPJ) and its maternal PeiAi64S (PA64S) and paternal WuMang9311 (WM9311) lines grown in the field during the reproductive stage. The results showed that photosynthetic functions, such as the electron transport activities of photosystems and photophosphorylation, assessed in vivo from P (n)/C (i) curves under field conditions declined more or earlier than those obtained in vitro. The degradation of polypeptides of thylakoid membranes was slower than those for P (Ca=360) (light-saturated net photosynthetic rate measured at 360 mumol mol(-1)) and CE (carboxylation efficiency, obtained from the initial slope of the P (n)/C (i) curve). The initial inhibition of the PSII electron transport and oxygen-evolving activity induced by senescence occurred before the degradation of the oxygen-evolving complex. In comparison, LYPJ had intermediate photosynthetic functions in the early stage of leaf development, but greater photochemical activities in the mid and late stages. WM9311 showed a similar pattern of changes but lower values, and PA64S had higher values in the early stage but showed a faster rate of senescence than LYPJ. These findings implied that the hybrid LYPJ demonstrated intermediate photosynthetic activities between its parents in the early stage of leaf development, whereas it had higher photosynthetic activities than its parents in the mid and late stages, which may be responsible for its high yield.

Cytogenetic characterization and fae1 gene variation in progenies from asymmetric somatic hybrids between Brassica napus and Crambe abyssinica.

Sexual progenies of asymmetric somatic hybrids between Brassica napus and Crambe abyssinica were analyzed with respect to chromosomal behavior, fae1 gene introgression, fertility, and fatty-acid composition of the seed. Among 24 progeny plants investigated, 11 plants had 38 chromosomes and were characterized by the occurrence of normal meiosis with 19 bivalents. The other 13 plants had more than 38 chromosomes, constituting a complete chromosomal set from B. napus plus different numbers of additional chromosomes from C. abyssinica. The chromosomes of B. napus and C. abyssinica origin could be clearly discriminated by genomic in situ hybridization (GISH) in mitotic and meiotic cells. Furthermore, meiotic GISH enabled identification of intergenomic chromatin bridges and of asynchrony between the B. napus and C. abyssinca meiotic cycles. Lagging, bridging and late disjunction of univalents derived from C. abyssinica were observed. Analysis of cleaved amplified polymorphic sequence (CAPS) markers derived from the fae1 gene showed novel patterns different from the B. napus recipient in some hybrid offspring. Most of the progeny plants had a high pollen fertility and seed set, and some contained significantly greater amounts of seed erucic acid than the B. napus parent. This study demonstrates that a part of the C. abyssinica genome can be transferred into B. napus via asymmetric hybridization and maintained in sexual progenies of the hybrids. Furthermore, it confirms that UV irradiation improves the fertility of the hybrid and of its sexual progeny via chromosomal elimination and facilitates the introgression of exotic genetic material into crop species.

Intermediate fertile Triticum aestivum (+) Agropyron elongatum somatic hybrids are generated by low doses of UV irradiation.

We report the production and characterization of somatic hybrids between Triticum aestivum L. and Agropyron elongatum (Host) Nevishi (the synonym is Thinopyrum ponticum). Asymmetric protoplast fusion was performed between Agropyron elongatum protoplasts irradiated with a low UV dose and protoplasts of wheat taken from nonregenerable suspension cultures. More than 40 green plantlets were obtained from 15 regenerated clones and one of them produced seeds. The phenotypes of the hybrid plants and seeds were intermediate between wheat and Agropyron elongatum. All of the regenerated calli and plants were verified as intergeneric hybrids on the basis of morphological observation and analysis of isozyme, cytological, 5SrDNA spacer sequences and random amplified polymorphic DNA (RAPD). RFLP analysis of the mitochondrial genome revealed evidence of random segregation and recombination of mtDNA.

Antioxidant metabolism during acclimation of Begonia x erythrophylla to high light levels.

This study examined the influence of high light levels on antioxidant metabolism and the photosynthetic properties of Begonia x erythrophylla leaves. The pigment composition of shaded leaves and those developing in full sunlight was typical of shade- and sun-leaves, respectively. After 28 d in full sunlight, the preformed leaves of shade plants transferred to full sunlight (transferred-leaves) showed photo-bleaching with lower Chl (a + b) content and Chl a : Chl b ratios than shade-leaves, with Chl (a + b) : carotenoid ratios not significantly different. The variable/maximal fluorescence (Fv/Fm) of sun-leaves was not significantly different from that of shade-leaves, but transferred-leaves had reduced Fv : Fm ratios. Light response curves for the electron transport rate (ETR), the oxidation state of photosystem II (qP) and non-photochemical quenching (NPQ) showed significant differences between the three leaf types, with transferred-leaves not able to acclimate completely to full sunlight, having lower ETR, qP and NPQ values at high light levels than sun-leaves. Transfer to full sunlight caused a rapid increase in H2O2 and lipid hyperoxides, and a slight increase in protein oxidation. Ascorbate and glutathione levels decreased rapidly, as did the size of the total glutathione pool and, in addition to the general oxidation of proteins, rapid decreases in both the initial and total activities of chloroplastic fructose-1,6-bisphosphatase and glyceraldehyde-3-phosphate dehydrogenase were observed. These results suggest that a more oxidizing cellular environment is the likely cause of the photo-bleaching observed upon transfer of shade-leaves to full sunlight. Acclimation of transferred-leaves to full sunlight involved gradual increases in the activities of enzymes involved in antioxidant metabolism, including superoxide dismutase, catalase, glutathione reductase, ascorbate peroxidase, dehydroascorbate reductase and monodehydroascorbate reductase, but the levels of these enzymes still remained at levels lower than those found in sun-leaves.

[Effect of chronic low-intensity gamma irradiation on embryogenesis in the silkworm (Bombyx mori L.)]. / Vliianie khronicheskogo gamma-oblucheniia maloi moshchnosti na émbriogenez tutovogo shelkopriada (Bombyx mori L.).

Gamma irradiation of a grain during embryogenesis at an intensity only 100 times exceeding that of the natural radioactive background reduces by 4-7 h the average time of embryogenesis for different species and hybrids of thesilworm embryo. The 10- and 40-time increase in the radiation intensity decreases the stimulatory effect and leads to the delay in the development.

[Phenomenon of parental resistance and its genetic regulation]. / Fenimen roditel'skoi rezistentnosti i ego geneticheskaia reguliatsiia.

Lymphocytes of mice F1 (CBA X M523) and F1 (A X M523) transplanted to 1000 R irradiated CBA or A mice responded to the test antigens--SRBC or S. typhi Vi-antigen--by formation of 100--1000 times less antibody forming cells than in syngeneic recipients. An intermediate result is achieved when the lymphoid cells are transplanted to the irradiated M523 mice. Lymphocytes of mice F1 (A X CBA), F1 (CBA X C57Bl/6), or F1 (A X A.CA) developed a similar immune response in the irradiated syngeneic mice and in both parental lines. The ability of parental line M523 to respond to SRBC was the same as in the other lines studied when examined in situ or in adoptive transfer experiments. The stem hemopoietic cells of mice F1 (CBA X M523) develop in the spleen of CBA mice 2--2.5 times less hemopoietic colonies than in the spleen of syngeneic animals. A conclusion was drawn that mutation M523 in CBA mice inhibited the proliferation and differentiation of hemopoietic and lymphoid cells in the irradiated nonsyngeneic recipients.

[Effect of mouse genotype on the hematopoietic stem cell count. II. The number of hematopietic stem cells in BALB/c and CC57BR strain mice differing by the level of endogenous colony formation]. / Vliianie genotipa myshei na chislo stvolovykh krovetvornykh kletok. Soobshchenie II. Kolichestvo stvolovykh krovetvornykh kletok u myshei linii BALB/c i CC57BR, razlichaiushchikhsia po urovniu éndogennogo kolonieobrazovaniia.

The number of stem hematopoietic cells in the hematopoietic organs of mice of BALB/c and CC57BR strains and (CC57BRXBALB/c)F1 hybrids was studied by the method of exogenous colony-forming units. The assay of migration of stem cells from the bone marrow to the spleen was carried out. It was found that the spleen and the bone marrow of mice of the studied genotypes contain approximately the same relative number of hematopoietic stem cells. The number of stem cells which migrate from the bone marrow to the spleen is greater in the mice of BALB/c strain than in the CC57BR mice.

[Contibution of the X chromosme to the increased resistance of inbred Drosophila melanogaster hybrids to physical effects]. / O vklade X-khromosomy v povyshenie ustoichivosti mezhlineinykh gibridom Drosophila melanogaster k nekotorym fizicheskim vozdeistviiam.

Effects of high sub-lethal temperature and UV-irradiation on surviving of inbred lines of Drosophila melanogaster and its F1 hybrids derived from reciprocal crosses between these lines are investigated. High resistance of F1 hybrids to these factors was observed as compared with that of parental inbred lines. D. melanogaster females in inbred lines and F1 hybrids were more resistant than males. Differences in the resistance between females and males were more pronounced in hybrids.

[Action of Co60 gamma radiation on the nucleic acid concentration and ribonuclease activity in the splenic tissues of inbred and hybrid mice]. / Deistvie gamma-izluchenii Co60 na kontsentratsiiu nukleinovykh kislot i aktivnost' ribonukleaz v tkaniakh selezenki inbrednykh i gibridnykh myshei

The spleen tissue radiation injury expressed in the organ weight loss, nucleic acid concentration decrease and ribonuclease activity increase was observed to a greater extent in mice of the AKR line and to a less extent in those of C57BL line; C57BL X AKR hybrids occupied an intermediate position. It shows that animal radiosensitivity is probably determined by the genotype.