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1.
Front Cell Infect Microbiol ; 14: 1421018, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-38938884

RESUMO

Introduction: Porphyromonas gingivalis and Porphyromonas endodontalis belong to the Bacteroidota phylum. Both species inhabit the oral cavity and can be associated with periodontal diseases. To survive, they must uptake heme from the host as an iron and protoporphyrin IX source. Among the best-characterized heme acquisition systems identified in members of the Bacteroidota phylum is the P. gingivalis Hmu system, with a leading role played by the hemophore-like HmuY (HmuYPg) protein. Methods: Theoretical analysis of selected HmuY proteins and spectrophotometric methods were employed to determine the heme-binding mode of the P. endodontalis HmuY homolog (HmuYPe) and its ability to sequester heme. Growth phenotype and gene expression analysis of P. endodontalis were employed to reveal the importance of the HmuYPe and Hmu system for this bacterium. Results: Unlike in P. gingivalis, where HmuYPg uses two histidines for heme-iron coordination, other known HmuY homologs use two methionines in this process. P. endodontalis HmuYPe is the first characterized representative of the HmuY family that binds heme using a histidine-methionine pair. It allows HmuYPe to sequester heme directly from serum albumin and Tannerella forsythia HmuYTf, the HmuY homolog which uses two methionines for heme-iron coordination. In contrast to HmuYPg, which sequesters heme directly from methemoglobin, HmuYPe may bind heme only after the proteolytic digestion of hemoglobin. Conclusions: We hypothesize that differences in components of the Hmu system and structure-based properties of HmuY proteins may evolved allowing different adaptations of Porphyromonas species to the changing host environment. This may add to the superior virulence potential of P. gingivalis over other members of the Bacteroidota phylum.


Assuntos
Proteínas de Bactérias , Heme , Porphyromonas endodontalis , Porphyromonas gingivalis , Tannerella forsythia , Heme/metabolismo , Porphyromonas gingivalis/metabolismo , Porphyromonas gingivalis/genética , Tannerella forsythia/metabolismo , Tannerella forsythia/genética , Proteínas de Bactérias/metabolismo , Proteínas de Bactérias/genética , Porphyromonas endodontalis/metabolismo , Porphyromonas endodontalis/genética , Humanos , Regulação Bacteriana da Expressão Gênica , Ligação Proteica , Ferro/metabolismo
2.
Shanghai Kou Qiang Yi Xue ; 30(4): 350-354, 2021 Aug.
Artigo em Chinês | MEDLINE | ID: mdl-34693425

RESUMO

PURPOSE: Porphyromonas endodontalis (P.e) is the dominant bacterium in the infected canal of pulpal and periapical disease.Lipopolysaccharides (LPS) in the outer membrane of the cell wall is an important toxicity factor of P.e. In this study, the effect of P.e-LPS on osteoblast differentiation was studied, and the pathogenic mechanism of P.e-LPS in periapical bone resorption disease was explored. METHODS: Porphyromonas endodontalis was cultured under anaerobic conditions. P.e-LPS was extracted by thermophenol water method, and then the extracted LPS was qualitatively analyzed by gel limulireagent method. Preosteoblast cell line MC3T3-E1 were induced to differentiate into osteoblasts by osteoblast differentiation medium (50 µg/mL ascorbic acid,6 mmol/L beta-glycerphosphate). Expressions of osteogenic differentiation genes including distal-less homeobox 5(DLX5), runt-related transcription factor 2(Runx2), Osterix, bone sialoprotein (BSP), OCN(osteocalcin) and Collagen were detected by RT-PCR. The activity of alkaline phosphatase(ALP), alizarin red staining and Von Kossa staining were used to determine the mineralization level of osteoblasts.The expression of TOLL-like receptor-4 (TLR-4), the receptor of P.e-LPS, was silenced by siRNA transfection. SPSS 11.0 software package was used for statistical analysis of the data. RESULTS: The mRNA expressions of osteogenic differentiation genes including DLX5, Runx2, Osterix, OCN, BSP, and Collagen were significantly decreased after treated with P.e-LPS (10 µg/mL) for 3 d, compared with the control group(P<0.05).After treated with P.e-LPS (10 µg/mL) for 7 d or 14 d, respectively, ALP and alizarin red staining intensity was decreased. P.e-LPS was applied to the si-TLR-4 transfection group and the control group for 7,14 and 21 d, respectively. Compared with the control group, the expression level of osteogenic differentiation genes, ALP, alizarin red staining and Von Kossa staining intensity of si-TLR-4 group were significantly higher than those of the control group (P<0.05). CONCLUSIONS: P.e-LPS inhibits the differentiation of osteoblasts through TLR-4 receptor, thus participating in bone resorption process of periapical lesions.


Assuntos
Osteogênese , Porphyromonas endodontalis , Diferenciação Celular , Lipopolissacarídeos/farmacologia , Osteoblastos , Porphyromonas endodontalis/genética
3.
Vet Rec ; 186(14): 450, 2020 04 18.
Artigo em Inglês | MEDLINE | ID: mdl-32066637

RESUMO

BACKGROUND: Non-healing bovine foot lesions, including non-healing white line disease, non-healing sole ulcer and toe necrosis, are an increasingly important cause of chronic lameness that are poorly responsive to treatment. Recent studies have demonstrated a high-level association between these non-healing lesions and the Treponema phylogroups implicated in bovine digital dermatitis (BDD). However, a polymicrobial aetiology involving other gram-stain-negative anaerobes is suspected. METHODS: A PCR-based bacteriological survey of uncomplicated BDD lesions (n=10) and non-healing bovine foot lesions (n=10) targeting Fusobacterium necrophorum, Porphyromonas endodontalis, Dichelobacter nodosus and Treponema pallidum/T. paraluiscuniculi was performed. RESULTS: P. endodontalis DNA was detected in 80.0% of the non-healing lesion biopsies (p=<0.001) but was entirely absent from uncomplicated BDD lesion biopsies. When compared to the BDD lesions, F. necrophorum was detected at a higher frequency in the non-healing lesions (33.3% vs 70.0%, respectively), whereas D. nodosus was detected at a lower frequency (55.5% vs 20.0%, respectively). Conversely, T. pallidum/T. paraluiscuniculi DNA was not detected in either lesion type. CONCLUSION: The data from this pilot study suggest that P. endodontalis and F. necrophorum should be further investigated as potential aetiological agents of non-healing bovine foot lesions. A failure to detect syphilis treponemes in either lesion type is reassuring given the potential public health implications such an infection would present.


Assuntos
Doenças dos Bovinos/microbiologia , Dermatite Digital/microbiologia , Infecções por Fusobacterium/veterinária , Sífilis/veterinária , Infecções por Treponema/veterinária , Animais , Bovinos , DNA Bacteriano/isolamento & purificação , Feminino , Infecções por Fusobacterium/microbiologia , Fusobacterium necrophorum/genética , Fusobacterium necrophorum/isolamento & purificação , Projetos Piloto , Reação em Cadeia da Polimerase/veterinária , Porphyromonas endodontalis/genética , Porphyromonas endodontalis/isolamento & purificação , Sífilis/microbiologia , Treponema pallidum/genética , Treponema pallidum/isolamento & purificação , Infecções por Treponema/microbiologia , Reino Unido
4.
Chin J Dent Res ; 20(3): 145-152, 2017.
Artigo em Inglês | MEDLINE | ID: mdl-28808698

RESUMO

OBJECTIVE: To analyse the microbiome composition of health and gingivitis in Chinese undergraduates with high-throughput sequencing. METHODS: Sequencing of 16S rRNA gene amplicons was performed with the MiSeq system to compare subgingival bacterial communities from 54 subjects with gingivitis and 12 periodontally healthy controls. RESULTS: A total of 1,967,372 sequences representing 14 phyla, 104 genera, and 96 species were detected. Analysis of similarities (Anosim) test and Principal Component Analysis (PCA) showed significantly different community profiles between the health control and the subjects with gingivitis. Alpha-diversity metrics were significantly higher in the subgingival plaque of the subjects with gingivitis compared with that of the healthy control. Overall, the relative abundance of 35 genera and 46 species were significantly different between the two groups, among them 28 genera and 45 species showed higher relative abundance in the subjects with gingivitis, whereas seven genera and one species showed a higher relative abundance in the healthy control. The genera Porphyromonas, Treponema, and Tannerella showed higher relative abundance in the subjects with gingivitis, while the genera Capnocytophaga showed higher proportions in health controls. Porphyromonas gingivalis, Prevotella intermedia and Porphyromonas endodontalis had higher relative abundance in gingivitis. Among them, Porphyromonas gingivalis was most abundant. CONCLUSION: Our results revealed significantly different microbial community composition and structures of subgingival plaque between subjects with gingivitis and healthy controls. Subjects with gingivitis showed greater taxonomic diversity compared with periodontally healthy subjects. The proportion of Porphyromonas, especially Porphyromonas gingivalis, may be associated with gingivitis subjects aged between 18 and 21 years old in China. Adults with gingivitis in this age group may have a higher risk of developing periodontitis.


Assuntos
Gengivite/microbiologia , Microbiota/genética , Adolescente , Povo Asiático , Bacteroidetes/genética , Capnocytophaga/genética , Estudos de Casos e Controles , China , Feminino , Humanos , Masculino , Porphyromonas/genética , Porphyromonas endodontalis/genética , Porphyromonas gingivalis/genética , Prevotella intermedia/genética , Análise de Componente Principal , RNA Ribossômico 16S/genética , Treponema/genética , Adulto Jovem
5.
Clin Infect Dis ; 65(1): 1-5, 2017 07 01.
Artigo em Inglês | MEDLINE | ID: mdl-28379309

RESUMO

Background: Methanogens are antibiotic-resistant anaerobic archaea that escape routine detection in clinical microbiology. We hypothesized that methanogens are part of the anaerobic community that cause brain abscess. Methods: Methanogens were investigated in 1 index sample using specific polymerase chain reaction (PCR) sequencing and culture. The pathogenesis of a methanogen isolate was assessed in a mouse model. Archaea-specific quantitative (q) PCR and metagenomics were used to detect specific archaeal sequences in brain abscess samples and controls. Results: In 1 index sample, routine culture found Porphyromonas endodontalis and Streptococcus intermedius, and specific culture found Methanobrevibacter oralis susceptible to metronidazole and fusidic acid. Archaea-targeted PCR sequencing and metagenomics confirmed M. oralis along with 14 bacteria, including S. intermedius. Archaea-specific qPCR yielded archaea in 8/18 brain abscess specimens and 1/27 controls (P < .003), and metagenomics yielded archaea, mostly methanogens, in 28/32 brain abscess samples, and no archaea in 71 negative controls (P < 10-6). Infection of mice brains yielded no mortality in 14 controls and death in 17/22 M. oralis-inoculated mice (P < 10-6), 32/95 S. intermedius-inoculated mice (P < 10-6), and 75/104 mice inoculated with M. oralis mixed with S. intermedius (P < 10-6) 7 days post-inoculation. Conclusion: Methanogens belong to the anaerobic community responsible for brain abscess, and M. oralis may participate in the pathogenicity of this deadly infection. In mice, a synergy of M. oralis and S. intermedius was observed. Antibiotic treatment of brain abscess should contain anti-archaeal compounds such as imidazole derivatives in most cases.


Assuntos
Abscesso Encefálico/microbiologia , Methanobrevibacter/genética , Adolescente , Adulto , Idoso , Idoso de 80 Anos ou mais , Animais , Abscesso Encefálico/mortalidade , Criança , Pré-Escolar , DNA Arqueal/genética , DNA Bacteriano/genética , Modelos Animais de Doenças , Feminino , Humanos , Lactente , Recém-Nascido , Camundongos , Pessoa de Meia-Idade , Porphyromonas endodontalis/genética , Reação em Cadeia da Polimerase em Tempo Real , Estudos Retrospectivos , Streptococcus intermedius/genética , Adulto Jovem
6.
J Contemp Dent Pract ; 18(1): 44-48, 2017 01 01.
Artigo em Inglês | MEDLINE | ID: mdl-28050984

RESUMO

INTRODUCTION: Apical periodontitis usually results from bacterial accumulation and contamination occurring in the root-canal system, and extending beyond the apical foramen to involve the periapical tissues. Literature has a paucity of the studies that stress on the division and analysis of the pulp canal segments. The reason for this disparity might be the technique used for collecting the samples from the pulp canals. Hence, we carried out the present study to evaluate the microbial flora in the apical part of the roots with necrotic pulp canals. MATERIALS AND METHODS: The present study included the assessment of 40 freshly extracted teeth that had necrotized pulpal tissue along with the presence of periapical periodontal lesions. Removal of the soft tissue lesions attached to the root portion of the teeth along with apical periodontal lesions was done with the help of scalpel blade, after rinsing them with a sterile solution of saline. Thorough cleaning of the root surfaces was done with hydrogen peroxide followed by rapid disinfection with the help of sodium hypochlorite at varying concentrations. Sectioning of the root portion of all the specimens with the help of a disk was done perpendicular to the long axis of the teeth at a distance of roughly 5 to 6 mm from the teeth's apicalmost point. Cryotubes were used for transferring the specimens of apical portions containing 1 mL of buffer and were subjected to immediate frozen processing at a temperature of -20°C. A 10 K-type file was used for the initial collection of the samples followed by subsequent incubation of the files and paper pints in the incubation cabinet. Subsequent deoxyribonucleic acid (DNA) extraction from the samples was done following the procedure described by Siqueira et al. Paster et al's modification of the reverse-capture checkerboard assay was used in the present study. Semiquantitative data were used for overcoming the difficulties arising due to obtaining the counts of the polymerase chain reaction (PCR)-based analysis of specimens. RESULTS: A positive result for the 16S ribosomal ribonucleic acid (rRNA) gene primer was observed only in two examined specimens of all the samples of the apical portion of the root canals in the present study. Negative result was shown by all the control group specimens, which were sterile samples. Presence of bacteria was confirmed by PCR in 38 out of 40 examined specimens. Amount of bacterial taxa, out of these 24 samples, ranged up to 6. Pseudoramibacter alactolyticus, Porphyromonas endodontalis, Dialister oral species, Bacteroidetes species, Streptococcus species, Olsenella uli, Synergistes species, Fusobacterium nucleatum, Parvimonas micra, Treponema denticola, and Filifactor alocis were the specific species detected. Bacteroidetes species was the only species that were detected at levels at or above 105. Heavy bacterial infections were noticed in more than 45% of the cases at the periradicular part of the root canals. CONCLUSION: Microbial flora of the apical segment of the root with necrotized pulp tissue comprises a vast variety of pathogenic bacteria. CLINICAL SIGNIFICANCE: For better prognosis of the treatment of such cases, adequate knowledge of the microbial flora of the root, especially the apical portion is necessary.


Assuntos
Periodontite Periapical/microbiologia , Ápice Dentário/microbiologia , Raiz Dentária/microbiologia , Bacteroidetes/genética , Bacteroidetes/isolamento & purificação , Fusobacterium nucleatum/genética , Fusobacterium nucleatum/isolamento & purificação , Humanos , Reação em Cadeia da Polimerase , Porphyromonas endodontalis/genética , Porphyromonas endodontalis/isolamento & purificação , RNA Ribossômico 16S , Streptococcus/genética , Streptococcus/isolamento & purificação , Treponema denticola/genética , Treponema denticola/isolamento & purificação
7.
Mol Oral Microbiol ; 30(4): 295-306, 2015 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-25601649

RESUMO

Porphyromonas endodontalis lipopolysaccharide (LPS) is considered to be correlated with the progression of bone resorption in periodontal and periapical diseases. Wnt5a has recently been implicated in inflammatory processes, but its role is unclear as a P. endodontalis LPS-induced mediator in osteoblasts. Tribbles homolog 3 (TRIB3) encodes a pseudokinase and has been linked to inflammation in certain situations. Here, we found that P. endodontalis LPS induced Wnt5a expression in a dose- and time-dependent manner and it also upregulated translocation, phosphorylation and transcriptional activity of nuclear factor-κB (NF-κB) in MC3T3-E1 cells. Bay 11-7082 blocked the translocation of NF-κB and Wnt5a expression induced by P. endodontalis LPS. Chromatin immunoprecipitation assay further established that induction of Wnt5a by P. endodontalis LPS was mediated through the NF-κB p65 subunit. Additionally, P. endodontalis LPS increased expression of TRIB3 in osteoblasts after 10 h simulated time. Overexpression of TRIB3 enhanced NF-κB phosphorylation and Wnt5a induction, whereas knockdown of TRIB3 inhibited NF-κB phosphorylation and Wnt5a expression in P. endodontalis LPS-stimulated osteoblasts. These results suggest that P. endodontalis LPS has the ability to promote the expression of Wnt5a in mouse osteoblasts, and this induction is mainly mediated by NF-κB pathway. TRIB3 seems to modulate the sustained expression of Wnt5a in osteoblasts stimulated by P. endodontalis LPS, as well as regulating NF-κB phosphorylation.


Assuntos
Lipopolissacarídeos/fisiologia , NF-kappa B/metabolismo , Osteoblastos/metabolismo , Porphyromonas endodontalis/patogenicidade , Proteínas Wnt/metabolismo , Transporte Ativo do Núcleo Celular , Animais , Linhagem Celular , Técnicas de Silenciamento de Genes , Camundongos , NF-kappa B/genética , Nitrilas/farmacologia , Fosforilação/efeitos dos fármacos , Porphyromonas endodontalis/efeitos dos fármacos , Porphyromonas endodontalis/genética , Transdução de Sinais/efeitos dos fármacos , Sulfonas/farmacologia , Proteínas Wnt/genética , Proteína Wnt-5a
8.
J Endod ; 40(3): 339-44, 2014 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-24565649

RESUMO

INTRODUCTION: Susceptibility to beta-lactamic agents has changed among anaerobic isolates from acute endodontic infections. The aim of the present study was to determine the prevalence of the cfxA/cfxA2 gene in Prevotella spp., Porphyromonas spp., and Parviomonas micra strains and show its phenotypic expression. METHODS: Root canal samples from teeth with acute endodontic infections were collected and Porphyromonas, Prevotella, and Parvimonas micra strains were isolated and microbiologically identified with conventional culture techniques. The susceptibility of the isolates was determined by the minimum inhibitory concentration of benzylpenicillin, amoxicillin, and amoxicillin + clavulanate using the E-test method (AB BIODISK, Solna, Sweden). The presence of the cfxA/cfxA2 gene was determined through primer-specific polymerase chain reaction. The nitrocefin test was used to determine the expression of the lactamase enzyme. RESULTS: Prevotella disiens, Prevotella oralis, Porphyromonas gingivalis, and P. micra strains were susceptible to benzylpenicillin, amoxicillin, and amoxicillin + clavulanate. The cfxA/cfxA2 gene was detected in 2 of 29 isolates (6.9%). Simultaneous detection of the cfxA/cfxA2 gene and lactamase production was observed for 1 Prevotella buccalis strain. The gene was in 1 P. micra strain but was not expressed. Three strains were positive for lactamase production, but the cfxA/cfxA2 gene was not detected through polymerase chain reaction. CONCLUSIONS: There is a low prevalence of the cfxA/cfxA2 gene and its expression in Porphyromonas spp., Prevotella spp., and P. micra strains isolated from acute endodontic infections. Genetic and phenotypic screening must be performed simultaneously to best describe additional mechanisms involved in lactamic resistance for strict anaerobes.


Assuntos
Doenças da Polpa Dentária/microbiologia , Peptostreptococcus/fisiologia , Porphyromonas/fisiologia , Prevotella/fisiologia , Resistência beta-Lactâmica/fisiologia , Amoxicilina/farmacologia , Combinação Amoxicilina e Clavulanato de Potássio/farmacologia , Antibacterianos/farmacologia , Infecções por Bacteroidaceae/microbiologia , Cefalosporinas , Infecções por Bactérias Gram-Positivas/microbiologia , Humanos , Indicadores e Reagentes , Testes de Sensibilidade Microbiana , Penicilina G/farmacologia , Peptostreptococcus/genética , Fenótipo , Porphyromonas/genética , Porphyromonas endodontalis/genética , Porphyromonas endodontalis/fisiologia , Porphyromonas gingivalis/genética , Porphyromonas gingivalis/fisiologia , Prevotella/genética , Prevotella intermedia/genética , Prevotella intermedia/fisiologia , Prevotella nigrescens/genética , Prevotella nigrescens/fisiologia , Resistência beta-Lactâmica/genética , Inibidores de beta-Lactamases/farmacologia , beta-Lactamases/análise , beta-Lactamases/genética
9.
J Oral Maxillofac Surg ; 70(7): 1507-14.e1-6, 2012 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-22326171

RESUMO

PURPOSE: Small subunit rRNA sequencing and phylogenetic analysis were used to identify cultivable and uncultivable microorganisms present in the dental plaque of symptomatic and asymptomatic partially erupted third molars to determine the prevalence of putative periodontal pathogens in pericoronal sites. MATERIALS AND METHODS: Template DNA prepared from subgingival plaque collected from partially erupted symptomatic and asymptomatic mandibular third molars and healthy incisors was used in polymerase chain reaction with broad-range oligonucleotide primers to amplify 16S rRNA bacterial and archaeal genes. Amplicons were cloned, sequenced, and compared with known nucleotide sequences in online databases to identify the microorganisms present. RESULTS: Two thousand three hundred two clones from the plaque of 12 patients carried bacterial sequences from 63 genera belonging to 11 phyla, including members of the uncultivable TM7, SR1, and Chloroflexi, and difficult-to-cultivate Synergistetes and Spirochaetes. Dialister invisus, Filifactor alocis, Fusobacterium nucleatum, Porphyromonas endodontalis, Prevotella denticola, Tannerella forsythia, and Treponema denticola, which have been associated with periodontal disease, were found in significantly greater abundance in pericoronal compared with incisor sites. Dialister invisus and F nucleatum were found in greater abundance in sites exhibiting clinical symptoms. The archaeal species, Methanobrevibacter oralis, which has been associated with severe periodontitis, was found in 3 symptomatic patients. CONCLUSIONS: These findings have provided new insights into the complex microbiota of pericoronitis. Several bacterial and archaeal species implicated in periodontal disease were recovered in greater incidence and abundance from the plaque of partially erupted third molars compared with incisors, supporting the hypothesis that the pericoronal region may provide a favored niche for periodontal pathogens in otherwise healthy mouths.


Assuntos
Archaea/classificação , Placa Dentária/microbiologia , Bactérias Gram-Negativas/classificação , Dente Serotino/microbiologia , Pericoronite/microbiologia , RNA Arqueal/análise , RNA Bacteriano/análise , RNA Ribossômico 16S/análise , Archaea/genética , Bacteroides/genética , Bacteroides/isolamento & purificação , Fusobacterium/genética , Fusobacterium/isolamento & purificação , Fusobacterium nucleatum/genética , Fusobacterium nucleatum/isolamento & purificação , Bacilos Gram-Negativos Anaeróbios Retos, Helicoidais e Curvos/classificação , Bacilos Gram-Negativos Anaeróbios Retos, Helicoidais e Curvos/genética , Bacilos Gram-Negativos Anaeróbios Retos, Helicoidais e Curvos/isolamento & purificação , Bactérias Gram-Negativas/genética , Humanos , Incisivo/microbiologia , Methanobrevibacter/genética , Methanobrevibacter/isolamento & purificação , Filogenia , Porphyromonas endodontalis/genética , Porphyromonas endodontalis/isolamento & purificação , Prevotella/genética , Prevotella/isolamento & purificação , Streptococcus/genética , Streptococcus/isolamento & purificação , Erupção Dentária , Treponema denticola/genética , Treponema denticola/isolamento & purificação
10.
J Periodontol ; 82(12): 1767-75, 2011 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-21513472

RESUMO

BACKGROUND: Microbial agents in root canal systems can induce periodontal inflammation. The aims of this study are to detect anaerobic microorganisms in endodontic-periodontal lesions, determine the genetic diversity among them, and assess the simultaneous colonization of the pulp and periodontal microenvironments by a single clone. METHODS: Twenty-seven teeth of patients with endodontic-periodontal lesions were selected. Samples were spread on an agar-blood medium, the detection of each species was performed using a polymerase chain reaction, and the determination of the simultaneous presence of the same species in the microenvironments by one or more clones was determined using arbitrarily primed PCR. RESULTS: Prevotella intermedia (Pi) was the most prevalent species of the colonies in periodontal pockets, whereas Porphyromonas gingivalis (Pg) and Pi were the more prevalent in root canals. Isolates of Pi and Pg were simultaneously identified in root canals and periodontal pockets. Eighteen percent of teeth exhibited the simultaneous colonization by Pg, Tannerella forsythia (previously T. forsythensis), and Porphyromonas endodontalis in the pulp and periodontal microenvironments. The presence of these species was noted even in niches from which no colonies were isolated. Seventeen different genotypes were found in periodontal and pulp sites, with the majority of sites colonized by one or two different genotypes. A high degree of genotype similarity was found for samples of Pg isolated from only one site as well as for those isolated from both microenvironments. CONCLUSION: Different clones of Pi and Pg with a high intraspecific genotype similarity were found to colonize the same anatomic sites in endodontic-periodontal infections.


Assuntos
Bactérias Anaeróbias/genética , Cavidade Pulpar/microbiologia , Periodontite Periapical/microbiologia , Bolsa Periodontal/microbiologia , Adulto , Bactérias Anaeróbias/classificação , Bacteroides/genética , Bacteroides/isolamento & purificação , Biodiversidade , Distribuição de Qui-Quadrado , Células Clonais , Feminino , Humanos , Masculino , Pessoa de Meia-Idade , Tipagem Molecular , Porphyromonas endodontalis/genética , Porphyromonas endodontalis/isolamento & purificação , Porphyromonas gingivalis/genética , Porphyromonas gingivalis/isolamento & purificação , Prevotella intermedia/genética , Prevotella intermedia/isolamento & purificação
11.
J Clin Microbiol ; 48(6): 2250-2, 2010 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-20392909
12.
Oral Microbiol Immunol ; 22(6): 419-28, 2007 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-17949346

RESUMO

BACKGROUND: Terminal restriction fragment length polymorphism (T-RFLP) analysis is commonly used to analyze microbial communities, including oral microflora. However, accurate identification of terminal restriction fragment (T-RF) origins is prevented by unpredictable errors in sizing, thus necessitating the clone library analysis. To minimize sizing errors, we proposed optimizing the size definition of internal standards. METHODS: GeneScan-1000 ROX was regenerated as an internal standard by redefining the fragment sizes in terms of molecular weight (MW) based on their mobility relative to 6-carboxyfluorescein (FAM) -labeled restriction fragments derived from the 16S recombinant RNA gene of Porphyromonas gingivalis. Using the new size definition, the average sizing error among eight oral bacteria from six phyla was estimated and compared with that of the conventional method. Microbial communities isolated from saliva were analyzed using the new MW size definition. Bacterial species were assigned to peaks using TRFMA, a Web-based tool for T-RFLP analysis, and compared with those identified in a clone library analysis. RESULTS: Using the new size definition, the average sizing error for 40 T-RFs was drastically reduced from 2.42 to 0.62 bases, and large sizing errors (more than two bases) were eliminated. More than 90% of the total bacterial clones detected by the clone library analysis were assigned by T-RFLP. CONCLUSION: The size definition of the newly constructed internal standards reduced fragment sizing errors and allowed for accurate assignment of bacteria to peaks by the T-RFLP analysis. This provided a more effective means for studying microbial communities, including the oral microflora.


Assuntos
DNA Bacteriano/análise , Bactérias Gram-Negativas/classificação , Bactérias Gram-Positivas/classificação , Filogenia , Polimorfismo de Fragmento de Restrição/genética , Actinomycetaceae/classificação , Actinomycetaceae/genética , Fluoresceínas , Corantes Fluorescentes , Fusobacterium nucleatum/classificação , Fusobacterium nucleatum/genética , Biblioteca Gênica , Bactérias Gram-Negativas/genética , Bactérias Gram-Positivas/genética , Humanos , Peso Molecular , Neisseria mucosa/classificação , Neisseria mucosa/genética , Reação em Cadeia da Polimerase , Porphyromonas endodontalis/classificação , Porphyromonas endodontalis/genética , Porphyromonas gingivalis/classificação , Porphyromonas gingivalis/genética , RNA Bacteriano/genética , RNA Ribossômico 16S , Análise de Sequência de DNA , Streptococcus mutans/classificação , Streptococcus mutans/genética , Treponema denticola/classificação , Treponema denticola/genética , Veillonella/classificação , Veillonella/genética
13.
Oral Microbiol Immunol ; 20(4): 211-5, 2005 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-15943764

RESUMO

he aim of this study was to investigate the presence of four black-pigmented bacteria, Porphyromonas gingivalis, Porphyromonas endodontalis, Prevotella intermedia and Prevotella nigrescens, in endodontic infections by culture and polymerase chain reaction (PCR) analyses. Microbial samples were obtained from 50 teeth with untreated necrotic pulps (primary infection) and from 50 teeth with failing endodontic treatment (secondary infection). Microbiological strict anaerobic techniques were used for serial dilution, plating, incubation, and identification. For PCR detection, the samples were analyzed using species-specific primers of 16S rDNA and the downstream intergenic spacer region. Culture and PCR detected the test species in 13/100 and 50/100 of the study teeth, respectively. The organisms were cultured from 11/50 (22%) of primarily infected root canal samples and from 2/50 (4%) of secondary root canal samples. PCR detection identified the target species in 32/50 (64%) and 18/50 (36%) of primary and secondary infections, respectively. P. gingivalis was rarely isolated by culture methods (1%), but was the most frequently identified test species by PCR (38%). Similarly, P. endodontalis was not recovered by culture from any tooth studied, but was detected by PCR in 25% of the sampled teeth. PCR-based identification also showed higher detection rates of P. intermedia (33%) and P. nigrescens (22%) than culture (13%). In conclusion, P. gingivalis, P. endodontalis, P. intermedia, and P. nigrescens were identified more frequently in teeth with necrotic pulp than in teeth with failing endodontic treatment. Also, a higher frequency of black-pigmented species was detected by PCR than by culture.


Assuntos
Infecções por Bacteroidaceae/microbiologia , Necrose da Polpa Dentária/microbiologia , Falha de Restauração Dentária , Porphyromonas/isolamento & purificação , Prevotella/isolamento & purificação , Técnicas de Tipagem Bacteriana , Contagem de Colônia Microbiana , DNA Bacteriano/análise , Feminino , Humanos , Masculino , Reação em Cadeia da Polimerase , Porphyromonas/genética , Porphyromonas/patogenicidade , Porphyromonas endodontalis/genética , Porphyromonas endodontalis/isolamento & purificação , Porphyromonas endodontalis/patogenicidade , Porphyromonas gingivalis/genética , Porphyromonas gingivalis/isolamento & purificação , Porphyromonas gingivalis/patogenicidade , Prevotella/genética , Prevotella/patogenicidade , Prevotella intermedia/genética , Prevotella intermedia/isolamento & purificação , Prevotella intermedia/patogenicidade , Prevotella nigrescens/genética , Prevotella nigrescens/isolamento & purificação , Prevotella nigrescens/patogenicidade
14.
FEMS Immunol Med Microbiol ; 43(2): 233-9, 2005 Feb 01.
Artigo em Inglês | MEDLINE | ID: mdl-15681153

RESUMO

A method for nucleic acid amplification, loop-mediated isothermal amplification (LAMP) was employed to develop a rapid and simple detection system for periodontal pathogen, Porphyromonas gingivalis. A set of six primers was designed by targeting the 16S ribosomal RNA gene. By the detection system, target DNA was amplified and visualized on agarose gel within 30 min under isothermal condition at 64 degrees C with a detection limit of 20 cells of P. gingivalis. Without gel electrophoresis, the LAMP amplicon was directly visualized in the reaction tube by addition of SYBR Green I for a naked-eye inspection. The LAMP reaction was also assessed by white turbidity of magnesium pyrophosphate (a by-product of LAMP) in the tube. Detection limits of these naked-eye inspections were 20 cells and 200 cells, respectively. Although false-positive DNA amplification was observed from more than 10(7) cells of Porphyromonas endodontalis, no amplification was observed in other five related oral pathogens. Further, quantitative detection of P. gingivalis was accomplished by a real-time monitoring of the LAMP reaction using SYBR Green I with linearity over a range of 10(2)-10(6) cells. The real-time LAMP was then applied to clinical samples of dental plaque and demonstrated almost identical results to the conventional real-time PCR with an advantage of rapidity. These findings indicate the potential usefulness of LAMP for detecting and quantifying P. gingivalis, especially in its rapidity and simplicity.


Assuntos
Técnicas Bacteriológicas , Placa Dentária/microbiologia , Técnicas de Amplificação de Ácido Nucleico/métodos , Periodontite/microbiologia , Porphyromonas gingivalis/isolamento & purificação , Benzotiazóis , DNA Bacteriano/análise , DNA Bacteriano/genética , DNA Ribossômico/análise , DNA Ribossômico/genética , Diaminas , Eletroforese em Gel de Ágar , Reações Falso-Positivas , Genes de RNAr , Humanos , Compostos Orgânicos/química , Porphyromonas endodontalis/genética , Porphyromonas endodontalis/isolamento & purificação , Porphyromonas gingivalis/genética , Quinolinas , RNA Ribossômico 16S/genética , Sensibilidade e Especificidade
15.
J Clin Microbiol ; 42(11): 5298-301, 2004 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-15528728

RESUMO

Three Porphyromonas species (Porphyromonas asaccharolytica, P. endodontalis, and the novel species that is the subject of the present report, P. uenonis) are very much alike in terms of biochemical characteristics, such as enzyme profiles and cellular fatty acid contents. P. asaccharolytica is distinguished from the other two species by virtue of production of alpha-fucosidase and glyoxylic acid positivity. The novel species is difficult to differentiate from P. endodontalis phenotypically and was designated a P. endodontalis-like organism for some time. However, P. endodontalis is recovered almost exclusively from oral sources and also grows poorly on Biolog Universal Agar, both characteristics that are in contrast to those of the other two organisms. Furthermore, P. uenonis is glycerol positive in the Biolog AN Microplate system. Both P. asaccharolytica and P. uenonis are positive by 13 other tests in the Biolog system, whereas P. endodontalis is negative by all of these tests. P. asaccharolytica grew well in both solid and liquid media without supplementation with 5% horse serum, whereas the other two species grew poorly without supplementation. Sequencing of 16S rRNA revealed about 10% divergence between the novel species and P. endodontalis but less than 2% sequence difference between the novel species and P. asaccharolytica. Subsequent DNA-DNA hybridization studies documented that the novel organism was indeed distinct from P. asaccharolytica. We propose the name Porphyromonas uenonis for the novel species. We have recovered P. uenonis from four clinical infections in adults, all likely of intestinal origin, and from the feces of six children.


Assuntos
Infecções por Bacteroidaceae/microbiologia , Fezes/microbiologia , Intestinos/microbiologia , Porphyromonas/classificação , Adulto , Técnicas de Tipagem Bacteriana , Criança , DNA Bacteriano/análise , Humanos , Dados de Sequência Molecular , Hibridização de Ácido Nucleico , Porphyromonas/genética , Porphyromonas/crescimento & desenvolvimento , Porphyromonas/metabolismo , Porphyromonas endodontalis/classificação , Porphyromonas endodontalis/genética , RNA Ribossômico 16S , Análise de Sequência de DNA
16.
Int Endod J ; 36(11): 774-9, 2003 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-14641442

RESUMO

AIM: To investigate the effect of black-pigmented Bacteroides on the expression of interleukin (IL)-8 gene in human pulp fibroblasts and osteoblasts. METHODOLOGY: The supernatants of Porphyromonas endodontalis, P. gingivalis and Prevotella intermedia were used to evaluate IL-8 gene expression in human pulp fibroblasts and osteoblasts. The levels of mRNAs were measured by the quantitative reverse transcriptase-polymerase chain reaction (RT-PCR) analysis. RESULTS: Investigations of the time-dependence of IL-8 mRNA expression in black-pigmented Bacteroides-treated pulp fibroblasts and osteoblasts revealed a rapid accumulation of the transcript after 2 h of exposure, and remained elevated throughout the 24-h incubation period. In addition, IL-8 mRNA gene expression was also found in human osteoblasts stimulated with black-pigmented Bacteroides. However, black-pigmented Bacteroides was found to be more effective in the induction of IL-8 mRNA gene expression in osteoblasts than in pulp fibroblasts (P < 0.05). CONCLUSIONS: Black-pigmented Bacteroides are capable of amplifying the local immune response and promoting pulpal/periapical tissue inflammation by stimulating pulp fibroblasts and osteoblasts to express IL-8.


Assuntos
Bacteroidaceae/genética , Polpa Dentária/imunologia , Fibroblastos/imunologia , Regulação Bacteriana da Expressão Gênica/genética , Interleucina-8/genética , Osteoblastos/imunologia , Análise de Variância , Linhagem Celular Tumoral , Células Cultivadas , Polpa Dentária/microbiologia , Fibroblastos/microbiologia , Humanos , Osteoblastos/microbiologia , Porphyromonas endodontalis/genética , Porphyromonas gingivalis/genética , Prevotella intermedia/genética , RNA Mensageiro/genética , Fatores de Tempo
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