RESUMO
PROBLEM: The Brown Norway (BN) rat is a model of T-helper 2 immune diseases, and also a model of pregnancy disorders that include placental insufficiency, fetal loss, and pre-eclampsia-like symptoms. The aim of this study was to investigate the plasma proteomic/cytokine profile of pregnant BN rats in comparison to that of the Lewis (LEW) rat strain. METHOD OF STUDY: Plasma proteomics differences were studied at day 13 of pregnancy in pooled plasma samples by differential in-gel electrophoresis, and protein identification was performed by mass spectrometry. Key protein findings and predicted cytokine differences were validated by ELISA using plasma from rats at various pregnancy stages. Proteomics data were used for ingenuity pathway analysis (IPA). RESULTS: In-gel analysis revealed 74 proteins with differential expression between BN and LEW pregnant dams. ELISA studies confirmed increased maternal plasma levels of complement 4, prothrombin, and C-reactive protein in BN compared to LEW pregnancies. LEW pregnancies showed higher maternal plasma levels of transthyretin and haptoglobin than BN pregnancies. Ingenuity pathway analysis revealed that BN pregnancies are characterized by activation of pro-coagulant, reactive oxygen species, and immune-mediated chronic inflammation pathways, and suggested increased interleukin 6 and decreased transforming growth factor-ß1 as potential upstream events. Plasma cytokine analysis revealed that pregnant BN dams have a switch from anti- to pro-inflammatory cytokines with the opposite switch observed in pregnant LEW dams. CONCLUSION: Brown Norway rats show a maternal pro-inflammatory response to pregnancy that likely contributes to the reproductive outcomes observed in this rat strain.
Assuntos
Regulação da Expressão Gênica , Inflamação/imunologia , Complicações na Gravidez/imunologia , Prenhez/imunologia , Proteômica , Ratos Endogâmicos BN/imunologia , Ratos Endogâmicos Lew/imunologia , Trombofilia/imunologia , Animais , Eletroforese das Proteínas Sanguíneas , Proteínas Sanguíneas/análise , Citocinas/sangue , Feminino , Retardo do Crescimento Fetal/sangue , Retardo do Crescimento Fetal/genética , Retardo do Crescimento Fetal/imunologia , Predisposição Genética para Doença , Inflamação/sangue , Inflamação/genética , Tamanho da Ninhada de Vivíparos , Modelos Animais , Circulação Placentária , Insuficiência Placentária/sangue , Insuficiência Placentária/genética , Insuficiência Placentária/imunologia , Pré-Eclâmpsia/sangue , Pré-Eclâmpsia/genética , Pré-Eclâmpsia/imunologia , Gravidez , Complicações na Gravidez/sangue , Complicações na Gravidez/genética , Prenhez/sangue , Prenhez/genética , Proteômica/métodos , Ratos , Ratos Endogâmicos BN/genética , Ratos Endogâmicos Lew/genética , Especificidade da Espécie , Trombofilia/sangue , Trombofilia/genéticaRESUMO
Lewis (LEW) and Fischer 344 (F344) rats are considered a model of genetic vulnerability to drug addiction. We previously showed important differences in spatial learning and memory between them, but in contrast with previous experiments demonstrating cocaine-induced enhanced learning in Morris water maze (MWM) highly demanding tasks, the eight-arm radial maze (RAM) performance was not modified either in LEW or F344 rats after chronic cocaine treatment. In the present work, chronically cocaine-treated LEW and F344 adult rats have been evaluated in learning and memory performance using the Y-maze, two RAM protocols that differ in difficulty, and a reversal protocol that tests cognitive flexibility. After one of the RAM protocols, we quantified dendritic spine density in hippocampal CA1 neurons and compared it to animals treated with cocaine but not submitted to RAM. LEW cocaine treated rats showed a better performance in the Y maze than their saline counterparts, an effect that was not evident in the F344 strain. F344 rats significantly took more time to learn the RAM task and made a greater number of errors than LEW animals in both protocols tested, whereas cocaine treatment induced deleterious effects in learning and memory in the highly difficult protocol. Moreover, hippocampal spine density was cocaine-modulated in LEW animals whereas no effects were found in F344 rats. We propose that differences in addictive-like behavior between LEW and F344 rats could be related to differences in hippocampal learning and memory processes that could be on the basis of individual vulnerability to cocaine addiction.
Assuntos
Comportamento Animal/efeitos dos fármacos , Região CA1 Hipocampal/efeitos dos fármacos , Cocaína/farmacologia , Espinhas Dendríticas/efeitos dos fármacos , Inibidores da Captação de Dopamina/farmacologia , Aprendizagem em Labirinto/efeitos dos fármacos , Modelos Animais , Animais , Contagem de Células , Masculino , Ratos , Ratos Endogâmicos F344/genética , Ratos Endogâmicos F344/fisiologia , Ratos Endogâmicos Lew/genética , Ratos Endogâmicos Lew/fisiologia , Memória Espacial/efeitos dos fármacosRESUMO
BACKGROUND: Risk-taking, measured with laboratory tasks such as the Balloon Analog Risk Task (BART), is associated with real-life manifestations of risky behaviors, which may be an important component of inherited liability to alcohol use disorders. To identify genomic factors that influence these traits, the current study (i) characterized performance of a rodent version of the BART in multiple inbred rat strains, (ii) tested the degree to which performance was under genetic control, (iii) explored sex differences in performance, and (iv) evaluated the risk-taking behavior of F1 progeny of high-risk- and low-risk-taking strains to examine modes of inheritance. METHODS: Male and female rats (N = 100) from 5 inbred strains (Wistar-Furth, Fischer-344, Lewis, Spontaneously Hypertensive, Brown Norway) and Wistar-Furth × Fischer-344 hybrids were tested in the rat-BART, as well as in tests of locomotor activity, sucrose preference, and general motivation. RESULTS: About 55% of the variance in risk-taking behavior was attributable to heritable factors. The Fischer-344 strain was the most risk-taking and the most variable in responding. The mating of low-risk-taking Wistar-Furth and Fischer-344 rats produced progeny that behaved most like the Fischer-344 strain. Consistent with prior research in this laboratory (Jentsch et al., 2010), all rats were sensitive to changes in both risk and reinforcement parameters in the rat-BART; rats decreased voluntary risk-taking in the face of increasing risk and increased lever pressing when reinforcement probabilities were reduced. CONCLUSIONS: Our results endorse a moderately heritable pattern of risk-taking behavior in rats. The behavior of the hybrid progeny suggests a polygenic model with most gene effects transmitted by mode of dominant inheritance. The identification of high-risk and low-risk strains allows for isolation of quantitative trait loci associated with task performance and for probing the relationships between risk-taking and dimensions of alcohol use disorders.
Assuntos
Condicionamento Operante , Tomada de Decisões/fisiologia , Comportamento Impulsivo/genética , Atividade Motora , Assunção de Riscos , Animais , Feminino , Masculino , Ratos/genética , Ratos/psicologia , Ratos Endogâmicos F344/genética , Ratos Endogâmicos F344/psicologia , Ratos Endogâmicos Lew/genética , Ratos Endogâmicos Lew/psicologia , Ratos Endogâmicos SHR/genética , Ratos Endogâmicos SHR/psicologia , Ratos Endogâmicos WF/genética , Ratos Endogâmicos WF/psicologia , Reforço Psicológico , Fatores SexuaisRESUMO
To elucidate the source of neointimal cells, experimental fistulas were created in Lewis wild-type (WT) and transgenic rats that constitutively expressed the green fluorescent protein (GFP) in all tissues. Arteriovenous fistula (AVFs) were created by anastomosing the left renal vein to the abdominal aorta. The contribution of bone marrow (BM)-derived cells to the AVF neointima was examined in lethally irradiated WT rats that had been rescued with GFP BM cells. Neointimal cells in these chimeric rats were mostly GFP negative indicating the non-BM origin of those cells. Then, the contribution of arterial cells to the AVF neointima was assessed in a fistula made with a GFP aorta that had been implanted orthotopically into a WT rat. Most of the neointimal cells were also GFP negative demonstrating that AVF neointimal cells are not derived from the feeding artery. Finally to study local resident cells contribution to the formation of neointimal lesions, a composite fistula was created by interposing a GFP vein between the renal vein and the aorta in a WT recipient rat. GFP neointimal cells were only found in the transplanted vein. This study suggests that neointimal cells originate from the local resident cells in the venous limb of the fistula.
Assuntos
Artérias/citologia , Derivação Arteriovenosa Cirúrgica , Células da Medula Óssea/patologia , Neointima/patologia , Veias/citologia , Animais , Artérias/patologia , Derivação Arteriovenosa Cirúrgica/efeitos adversos , Proteínas de Fluorescência Verde/metabolismo , Microscopia Confocal , Ratos , Ratos Endogâmicos Lew/genética , Ratos Transgênicos , Células-Tronco , Veias/patologiaRESUMO
LEW and BN rats, that behave in opposite ways for their susceptibility to various immune-mediated diseases, provide a powerful model to investigate the molecular and genetic bases of immune system physiology and dysregulation. Using this model, we addressed the question of the genetic control of central nervous system autoimmunity, of xenobiotic-induced allergic diseases, and of T cell subsets that differ by their cytokine profiles. By linkage analysis and genetic dissection, using a panel of congenic rats, we identified a 120 Kb region on chromosome 9 that controls all these phenotypes, indicating that this region contains a gene or set of genes that plays an important role in the immune system homeostasis and susceptibility to immune mediated diseases. In this review, we will describe these rat genomics studies and will discuss the cellular and genetic factors that may be involved in the differences between these rat strains.
Assuntos
Modelos Animais de Doenças , Genômica/métodos , Doenças do Sistema Imunitário/genética , Ratos Endogâmicos BN/genética , Ratos Endogâmicos Lew/genética , Animais , Hipersensibilidade/genética , Doença Autoimune do Sistema Nervoso Experimental/genética , Ratos , Ratos Endogâmicos BN/imunologia , Ratos Endogâmicos Lew/imunologia , Subpopulações de Linfócitos T/imunologia , Subpopulações de Linfócitos T/metabolismoRESUMO
This study examined the effect of transfer of overlapping regions of chromosome 5 that includes (4A(+)) or excludes (4A(-)) the cytochrome P-450 4A (CYP4A) genes from the Lewis rat on the renal production of 20-hydroxyeicosatetraenoic acid (20-HETE) and the development of hypertension-induced renal disease in congenic strains of Dahl salt-sensitive (Dahl S) rats. The production of 20-HETE was higher in the outer medulla of 4A(+) than in Dahl S or 4A(-) rats. Mean arterial pressure (MAP) rose to 190 +/- 7 and 185 +/- 3 mmHg in Dahl S and 4A(-) rats fed a high-salt (HS) diet for 21 days but only to 150 +/- 5 mmHg in the 4A(+) strain. Protein excretion increased to 423 +/- 40 and 481 +/- 37 mg/day in Dahl S and 4A(-) rats vs. 125 +/- 15 mg/day in the 4A(+) strain. Baseline glomerular capillary pressure (Pgc) was lower in 4A(+) rats (38 +/- 1 mmHg) than in Dahl S rats (42 +/- 1 mmHg). Pgc increased to 50 +/- 1 mmHg in Dahl S rats fed a HS diet, whereas it remained unaltered in 4A(+) rats (39 +/- 1 mmHg). Baseline glomerular permeability to albumin (P(alb)) was lower in 4A(+) rats (0.19 +/- 0.05) than in Dahl S or 4A(-) rats (0.39 +/- 0.02). P(alb) rose to approximately 0.61 +/- 0.03 in 4A(-) and Dahl S rats fed a HS diet for 7 days, but it remained unaltered in the 4A(+) rats. The expression of transforming growth factor-beta2 was higher in glomeruli of Dahl S rats than in 4A(+) rats fed either a low-salt (LS) or HS diet. Chronic administration of a 20-HETE synthesis inhibitor (HET0016; 10 mg.kg(-1).day(-1) sc) reversed the fall in MAP and renoprotection seen in 4A(+) rats. These results indicate that the introgression of the CYP4A genes from Lewis rats into the Dahl S rats increases the renal formation of 20-HETE and attenuates the development of hypertension and renal disease.
Assuntos
Citocromo P-450 CYP4A/genética , Ratos Endogâmicos Dahl/genética , Ratos Endogâmicos Lew/genética , Animais , Mapeamento Cromossômico , Primers do DNA , Regulação Enzimológica da Expressão Gênica , Técnicas de Transferência de Genes , Ácidos Hidroxieicosatetraenoicos/metabolismo , Hipertensão/prevenção & controle , Córtex Renal/enzimologia , Medula Renal/enzimologia , Microssomos/enzimologia , Ratos , Albumina Sérica/metabolismo , Especificidade da EspécieRESUMO
BACKGROUND: Hypertension and diastolic heart failure are two common cardiovascular diseases that inflict heavy morbidity and mortality, yet relatively little is understood about their pathophysiology. The identification of quantitative trait loci for blood pressure is important in unveiling the causes of polygenic hypertension. Although Dahl salt-sensitive strain is also an excellent model for the study of diastolic heart failure, virtually nothing is known about the quantitative trait loci determining diastolic heart failure. Diastolic dysfunction often represents the onset of diastolic heart failure. METHODS: We first characterized the cardiac phenotype of Dahl salt-sensitive strain and normotensive Lewis control rats by echocardiography to ascertain diastolic function. We then analyzed corresponding features of four newly developed and two existing congenic strains, each of which carries a specific chromosome substitution of Dahl salt-sensitive strain by its Lewis homologue and each lowering blood pressure. RESULTS: Dahl salt-sensitive strain displayed diastolic dysfunction that was rectified in two of six congenic strains, designated as positive congenic strains, which represent the first rodent models exhibiting functional normalization of diastolic dysfunction caused by naturally occurring genetic variants. The two positive congenic strains also showed a reduction in left ventricular mass. In contrast, four of six congenic strains did not change diastolic function despite their blood pressure-lowering effects. CONCLUSION: Genes present in the replaced chromosome segments of the two positive congenic strains are not commonly known to affect blood pressure, diastolic function or left ventricular mass. Consequently, novel prognostic, diagnostic and therapeutic strategies for hypertensive diastolic heart failure likely emerge from this work.
Assuntos
Hipertensão/genética , Locos de Características Quantitativas , Disfunção Ventricular Esquerda/genética , Animais , Masculino , Ratos , Ratos Endogâmicos Dahl/genética , Ratos Endogâmicos Lew/genética , Ultrassonografia , Disfunção Ventricular Esquerda/diagnóstico por imagemRESUMO
Rats are employed to investigate the role of platelets in thrombus formation under flow conditions in vivo and to evaluate the pre-clinical potential of antiplatelet drugs. While Wistar and Sprague-Dawley (SD) strains are commonly used in thrombosis models, a number of rat strains have been established. Each strain possesses genetically unique characteristics such as hypertension, hyperglycemia or hyperlipidemia. The appropriate selection of a strain might have advantages for physiological and pharmacological studies. Comparative investigation of platelet aggregation among laboratory strains of rats is useful for the development of thrombosis models. In the present study, platelet aggregation response in eight laboratory rat strains, ACI, Brown Norway (BN), Donryu, Fischer 344 (F344), LEW, SD, Wistar and WKAH, were compared. Considerable strain differences were observed in ADP-, collagen- and TRAP-induced platelet aggregation. SD and BN are high-platelet-aggregation strains, while F344 and ACI are low-response strains. In the arteriovenous shunt thrombosis model, SD formed larger thrombi than F344 and Wistar rats. In the FeCl(3)-induced thrombosis model with the carotid artery, the time to occlusion of SD was significantly shorter than of F344 and ACI rats. F344 and ACI rats had significantly increased bleeding times compared with SD rat. The present study demonstrates that there are considerable strain differences in platelet aggregation among laboratory rats, which reflect thrombus formation.
Assuntos
Plaquetas , Modelos Animais de Doenças , Variação Genética , Agregação Plaquetária/genética , Ratos/genética , Trombose/genética , Difosfato de Adenosina/farmacologia , Animais , Derivação Arteriovenosa Cirúrgica , Tempo de Sangramento , Plaquetas/efeitos dos fármacos , Plaquetas/metabolismo , Cloretos , Colágeno/farmacologia , Avaliação Pré-Clínica de Medicamentos/métodos , Compostos Férricos , Fibrinolíticos/farmacologia , Inibidores da Agregação Plaquetária/farmacologia , Ratos Endogâmicos ACI/genética , Ratos Endogâmicos BN/genética , Ratos Endogâmicos F344/genética , Ratos Endogâmicos Lew/genética , Ratos Sprague-Dawley/genética , Ratos Wistar/genética , Receptores de Trombina/metabolismo , Especificidade da Espécie , Trombose/sangue , Trombose/induzido quimicamenteRESUMO
Inbred strains of the laboratory rat (Rattus norvegicus) are commonly used models in biomedical and behavioral research. Genetic contamination caused by breeding errors, incomplete inbreeding with residual allogenicity, mutation, and genetic drift all are known to contribute to substrain divergence. Therefore, colonies of inbred strains from various suppliers likely contain differing amounts of genetic variation. We used microsatellite markers to scan the genomes and compare the genetic composition of 3 Lewis substrains and 2 Wistar-Furth substrains obtained from 3 different suppliers. LEW/SsNHsd rats showed approximately 37% genomic difference as compared with LEW/MolTac rats, and 8% difference as compared with LEW/Crl rats. WF/NHsd rats demonstrated a difference of approximately 8% as compared with WF/CrCrl rats. Investigators should consider the background genetics of the particular strains for their research projects and should use strains from a single source when feasible.
Assuntos
Genoma , Repetições de Microssatélites , Ratos Endogâmicos Lew/genética , Ratos Endogâmicos WF/genética , Animais , Genótipo , Polimorfismo Genético , RatosRESUMO
High-molecular-weight kininogen (HK) and its domain 3 (D3) exhibit anticoagulant properties and inhibit platelet activation at low thrombin concentration in vitro. We hypothesized that the rapid occlusive thrombosis in HK-deficient (HKd) rats following endothelial injury of the aorta results from enhanced platelet aggregation by thrombin. The effects of D3 (G235-M357) or D3-derived peptides on thrombosis in vivo were tested. D3 and its exon 7C terminal peptide (E7CP, K270-Q292), expressed as glutathione S-transferase (GST) fusion proteins (GST-D3, GST-E7CP), or GST alone, as well as cleaved HK (HKa) or synthetic peptide E7CP, were infused intravenously 10 min before endothelial injury. Blood flow was reduced down to 10% of baseline flow within 28 +/- 5.2 min by a platelet-fibrin thrombus in GST-treated HKd rats compared with >240 min in GST-treated normal HK rats (wild type). GST-D3, GST-E7CP, HKa, or E7CP infusion prolonged the flow time to 233, >240, 223, and >240 min, respectively, in HKd rats. When GST-E7CP was infused 10 min after the injury, blood flow was maintained for >240 min. Thrombin-antithrombin concentrations were elevated by injury in HKd rats receiving GST from 35 to 55 microg/l and decreased with GST-E7CP, HKa, or E7CP reconstitution to 40, 15, and 9 microg/l, respectively. We conclude that HKd rats are prothrombotic and that HKa, kininogen D3, and its fragment E7CP modulate arterial thrombosis after endothelial injury.
Assuntos
Aorta/metabolismo , Endotélio Vascular/metabolismo , Fibrinolíticos/metabolismo , Cininogênio de Alto Peso Molecular/metabolismo , Fragmentos de Peptídeos/metabolismo , Trombose/metabolismo , Sequência de Aminoácidos , Animais , Animais Geneticamente Modificados , Antitrombina III , Aorta/efeitos dos fármacos , Aorta/lesões , Aorta/patologia , Aorta/fisiopatologia , Velocidade do Fluxo Sanguíneo , Modelos Animais de Doenças , Endotélio Vascular/efeitos dos fármacos , Endotélio Vascular/lesões , Endotélio Vascular/patologia , Endotélio Vascular/fisiopatologia , Fibrina/metabolismo , Fibrinolíticos/química , Fibrinolíticos/farmacologia , Fibrinolíticos/uso terapêutico , Glutationa Transferase/genética , Cininogênio de Alto Peso Molecular/química , Cininogênio de Alto Peso Molecular/genética , Cininogênio de Alto Peso Molecular/farmacologia , Cininogênio de Alto Peso Molecular/uso terapêutico , Masculino , Dados de Sequência Molecular , Fragmentos de Peptídeos/genética , Fragmentos de Peptídeos/farmacologia , Peptídeo Hidrolases/sangue , Agregação Plaquetária , Estrutura Terciária de Proteína , Ratos , Ratos Endogâmicos Lew/genética , Proteínas Recombinantes de Fusão/metabolismo , Fluxo Sanguíneo Regional , Trombina/metabolismo , Trombose/patologia , Trombose/fisiopatologia , Trombose/prevenção & controleRESUMO
Lewis and Fischer 344 (F344) rats differ in their pharmacological responses to a variety of drugs such as opioids, which has been partially attributed to differences in the endogenous opioid tone. Since opioid and alpha2-adrenergic mechanisms closely interact in nociception and substance abuse, a comparative study of the endogenous alpha2-adrenergic system in both inbred strains is of interest. Alpha-2 adrenoceptor subtypes and tyrosine hydroxylase, the rate-limiting enzyme of the catecholamine biosynthesis, were studied by Taqman RT-PCR analysis of gene expression in four brain areas of F344 and Lewis rats: hypothalamus, hippocampus, striatum and cortex. No differences were found in the mRNA levels of alpha2A- and alpha2C-adrenoceptors in any of the areas examined, however F344 rats exhibited lower levels of alpha2B-adrenoceptor transcripts in the hippocampus and higher levels in the hypothalamus. Tyrosine hydroxylase gene expression was found to be higher in hippocampus and striatum of F344 rats compared to Lewis, and a consistent 2-fold increase of the protein levels was detected by Western blots only in the case of the hippocampus. These results together with previous studies strongly suggest that the hippocampal noradrenergic activity of Lewis and F344 rats could be involved in their different responses to pain, stress and drug addiction.
Assuntos
Ratos Endogâmicos F344/metabolismo , Ratos Endogâmicos Lew/metabolismo , Receptores Adrenérgicos alfa 2/metabolismo , Tirosina 3-Mono-Oxigenase/metabolismo , Animais , Encéfalo/enzimologia , Expressão Gênica , Masculino , RNA Mensageiro/metabolismo , Ratos , Ratos Endogâmicos F344/genética , Ratos Endogâmicos Lew/genética , Receptores Adrenérgicos alfa 2/genética , Reação em Cadeia da Polimerase Via Transcriptase Reversa , Especificidade da Espécie , Tirosina 3-Mono-Oxigenase/genéticaRESUMO
Toxoplasmosis is a ubiquitous parasitic infection causing a wide spectrum of diseases. It is usually asymptomatic but can lead to severe ocular and neurological disorders. Among the small-animal models available to study factors that determine susceptibility to toxoplasmosis, the rat appears to be rather similar to humans, particularly in terms of resistance to acute infection. Here, we demonstrate that the Lewis (LEW) rat strain displays an unexpected refractoriness to Toxoplasma infection. Complete resistance was assessed by both negative anti-Toxoplasma serology and lack of detection of the parasite during the course of infection. In this model, sex, age, major histocompatibility complex, and inoculum size had no effect on resistance. Interestingly, progeny from F(1) hybrid crosses between Fischer (F344) or Brown Norway susceptible rats and LEW resistant rats were also fully resistant, showing a dominant effect of the gene or set of genes. Furthermore, resistance of the LEW rat was shown to be dependent on hematopoietic cells and partially abrogated by neutralization of endogenous gamma interferon. To our knowledge, this is the first observation of a rodent strain that is refractory to Toxoplasma infection. This model is therefore an attractive and powerful tool to dissect host genetic factors involved in susceptibility to toxoplasmosis.
Assuntos
Predisposição Genética para Doença , Células-Tronco Hematopoéticas/imunologia , Imunidade Inata/genética , Ratos Endogâmicos Lew/genética , Toxoplasmose Animal/genética , Toxoplasmose Animal/imunologia , Animais , Encéfalo/parasitologia , Feminino , Haplótipos , Células-Tronco Hematopoéticas/metabolismo , Antígenos de Histocompatibilidade/genética , Imunoglobulina G/sangue , Interferon gama/metabolismo , Intestinos/parasitologia , Masculino , Ratos , Ratos Endogâmicos Lew/imunologiaRESUMO
Single nucleotide polymorphisms (SNPs) are the most common genetic variation in mammalian populations. Their significance is illustrated by their potential contribution to common disease but also by their potential for use in genetic association and mapping experiments. We have examined the genetic variation between commonly used inbred rat strains by using an efficient SNP discovery and typing assay based on enzyme-based (CEL I) heteroduplex cleavage. Screening of a panel of 96 different rat (sub-)strains for 100 genomic loci in 55 genes, whose human homologs are implicated in clinically relevant diseases like neurological disorder, cancer, schizophrenia, and obesity, resulted in the identification of 103 novel polymorphisms. As all strains are simultaneously genotyped in this setup, this allowed us to make an estimate of the genetic variation between and within commonly used rat inbred strains. Interestingly, we observed substantial genetic variation between colonies of the same inbred strain, maintained at different locations. Furthermore, we identified 17 non-synonymous SNPs that may have an effect on protein function and contribute to phenotypic differences between different laboratory strains.
Assuntos
Variação Genética/genética , Fases de Leitura Aberta/genética , Polimorfismo de Nucleotídeo Único/genética , Ratos Endogâmicos/genética , Animais , DNA/genética , DNA Intergênico/genética , Genótipo , Reação em Cadeia da Polimerase/métodos , Ratos , Ratos Endogâmicos BN/genética , Ratos Endogâmicos Lew/genética , Análise de Sequência de DNA/métodos , Especificidade da EspécieRESUMO
Single nucleotide polymorphisms (SNPs) are the most common source of genetic variation in populations and are thus most likely to account for the majority of phenotypic and behavioral differences between individuals or strains. Although the rat is extensively studied for the latter, data on naturally occurring polymorphisms are mostly lacking. We have used publicly available sequences consisting of whole-genome shotgun (WGS), expressed sequence tag (EST), and mRNA data as a source for the in silico identification of SNPs in gene-coding regions and have identified a large collection of 33,305 high-quality candidate SNPs. Experimental verification of 471 candidate SNPs using a limited set of rat isolates revealed a confirmation rate of approximately 50%. Although the majority of SNPs were identified between Sprague-Dawley (EST data) and Brown Norway (WGS data) strains, we found that 66% of the verified variations are common among different rat strains. All SNPs were extensively annotated, including chromosomal and genetic map information, and nonsynonymous SNPs were analyzed by SIFT and PolyPhen prediction programs for their potential deleterious effect on protein function. Interestingly, we retrieved three SNPs from the database that result in the introduction of a premature stop codon and that could be confirmed experimentally. Two of these "in silico-identified knockouts" reside in interesting QTL regions. Data are publicly available via a Web interface (http://cascad.niob.knaw.nl), allowing simple and advanced search queries.
Assuntos
Etiquetas de Sequências Expressas , Polimorfismo de Nucleotídeo Único/genética , Animais , Bases de Dados Genéticas , Filogenia , Polimorfismo de Nucleotídeo Único/fisiologia , Valor Preditivo dos Testes , Proteínas/fisiologia , Ratos , Ratos Endogâmicos BN/genética , Ratos Endogâmicos BUF/genética , Ratos Endogâmicos F344/genética , Ratos Endogâmicos Lew/genética , Ratos Endogâmicos SHR/genética , Ratos Sprague-Dawley/genética , Software , Validação de Programas de ComputadorRESUMO
OBJECTIVE: To improve the localization of a blood pressure quantitative trait locus (BP QTL) on rat chromosome (RNO) 1. METHODS: Congenic substrains were derived from the progenitor congenic strains S.LEW(D1Mco4X1) and S.LEW(D1Mco4X5) which previously localized a BP QTL (region 2) to a 17cM interval on RNO1. The newly developed congenic substrains, along with control Dahl salt-sensitive (S) rats were fed a 2% NaCl diet for 24 days before their BP was compared by both tail-cuff and radiotelemetry methods. RESULTS: By comparing BP of these congenic substrains to that of S rats, we have refined the location of the BP QTL2 region to a 2.73 Mb genomic interval that contains 19 annotated genes in the latest rat genome assembly (version 2.1). Slc9a3, the gene encoding the Na(+)/H(+) exchanger 3, originally a candidate gene in the BP QTL2 region, is excluded based on its map location. CONCLUSION: Substitution mapping was used to reduce a BP QTL on RNO1 from 17 centimorgans (cM) to approximately 1.4 cM (= 2.73 Mb). This region now contains 19 annotated rat candidate genes.
Assuntos
Pressão Sanguínea , Mapeamento Cromossômico , Animais , Animais Congênicos , Genoma , Locos de Características Quantitativas , Ratos , Ratos Endogâmicos Dahl , Ratos Endogâmicos Lew/genéticaRESUMO
The aim of the study was to determine whether the nonspecific in vivo airway hyperresponsiveness of the inbred Fisher F-344 rat strain was associated with differences in the intrinsic contractile properties of tracheal smooth muscle (TSM) when compared with Lewis rats. Isotonic and isometric contractile properties of isolated TSM from Fisher and Lewis rats (each n=10) were investigated, and myosin crossbridge (CB) number, force and kinetics in both strains were calculated using Huxley's equations adapted to nonsarcomeric muscles. Maximum unloaded shortening velocity and maximum extent of muscle shortening were higher in Fisher than in Lewis rats (approximately 46% and approximately 42%, respectively), whereas peak isometric tension was similar. The curvature of the hyperbolic force/velocity relationship did not differ between strains. Myosin CB number and unitary force were similar in both strains. The duration of CB detachment and attachment was shorter in Fisher than in Lewis rats (approximately -46% and -34%, respectively). In Fisher rats, these results show that inherited, genetically determined factors of airway hyperresponsiveness are associated with changes in crossbridge kinetics, contributing to an increased tracheal smooth muscle shortening capacity and velocity.
Assuntos
Hiper-Reatividade Brônquica/genética , Contração Muscular/genética , Músculo Liso/fisiologia , Ratos Endogâmicos F344/genética , Ratos Endogâmicos Lew/genética , Traqueia/fisiologia , Animais , Hiper-Reatividade Brônquica/fisiopatologia , Cinética , Miosinas/genética , RatosRESUMO
La mayor actividad de la enzima convertidora de angiotensina I (ECA) determina mayores niveles de angiotensina (Ang) II y menores de Ang-(1-7). Hemos observado mayores niveles de Ang II en ratas normotensas con mayor actividad de ECA y simultáneamente mayor hipertensión renovascular. Planteamos que en esta situación los niveles de Ang (1-7) podrían modificarse por la HTA y además ser inversamente proporcionales a la actividad de ECA y a los niveles de Ang II. Métodos: se determinó angiotensina II y (1-7) plasmáticas en ratas normotensas e hipertensas renovasculares (modelo Goldblatt 2 riñones, 1 clip) en cepas F2 homocigotas Brown Norway (BN, con ECA elevada) o Lewis (con ECA baja). Resultados: Promedio (ES). Los niveles de hipertensión arterial e HVI fueron similares en ambas cepas en los grupos Goldblatt. Los niveles plasmáticos de Ang II fueron 509 (37) U/ml en ratas BN normotensas y 173 (25) U/mL en ratas Lewis normotensas (p <0,05). Los niveles plasmáticos de Ang (1-7) fueron 4 veces mayores en ratas Lewis normotensas que las normotensas BN (p <0,05) y se elevaron significativamente con la hipertensión (p <0,05). Conclusión: Estos resultados podrían explicar la diferencia en la magnitud de la HTA observada previamente entre ambos genotipos de ECA y la mayor tendencia a presentar hipertensión arterial en hombres que presentan el alelo D del polimorfismo ECA I/D.
Assuntos
Animais , Camundongos , Angiotensina I/biossíntese , Angiotensina II/análise , Hipertensão Renovascular/enzimologia , Peptidil Dipeptidase A/genética , Genótipo , Fragmentos de Peptídeos , Reação em Cadeia da Polimerase , Polimorfismo Genético , Ratos Endogâmicos BN/genética , Ratos Endogâmicos Lew/genética , VasodilatadoresRESUMO
Previously, we have shown that Lewis (LEW) rats acquire faster than Fischer 344 (F344) rats operant food- and morphine-reinforced tasks under fixed-ratio schedules of reinforcement. The first purpose of the present work has been to study if differences in operant responding behavior may participate in the reported differences in morphine self-administration behavior between both inbred rat strains. To this end, we have analyzed the microstructure of responding obtained under a variable-interval (VI) of food reinforcement by calculating the inter-response time (IRT) for each rat strain. LEW rats exhibited shorter IRTs than F344 rats, suggesting that LEW rats may have an inherent high or compulsive operant responding activity. When subjects of both inbred rat strains were submitted to a schedule of morphine reinforcement of high responding requirements such as progressive ratio schedules, LEW rats also reached significantly higher breaking points and final response ratio than F344 rats for i.v. morphine self-administration. Given that there are neurochemical differences between both rat strains and that glutamatergic N-methyl-D-aspartate (NMDA) and dopaminergic D(1) receptors have been involved in operant responding behavior, a second purpose of this work has been to measure basal NMDA and D(1) receptor levels in these rat strains by quantitative receptor autoradiography. Compared to F344 rats, LEW rats showed higher basal NMDA receptor levels in frontal and cingulate cortex, caudate putamen, central amygdaloid nuclei, and intermediate white layer of superior colliculus, and higher basal D(1) receptor levels in several areas of hippocampus and thalamus, and substantia nigra pars reticulata. Taken together, these results suggest that an inherent high operant responding activity of LEW rats may have a role in the previous reported faster acquisition of opiate-reinforced behavior in operant self-administration paradigms under fixed-ratio schedules of reinforcement. In addition, a basal higher NMDA and D(1) receptor levels of LEW rats compared to F344 rats may participate in the neurochemical background that mediates the behavioral differences between both inbred rat strains.
Assuntos
Condicionamento Operante , Alimentos , Morfina/farmacologia , Entorpecentes/farmacologia , Receptores de Dopamina D1/metabolismo , Receptores de N-Metil-D-Aspartato/metabolismo , Animais , Autorradiografia/métodos , Comportamento Animal , Sítios de Ligação , Encéfalo/metabolismo , Mapeamento Encefálico , Masculino , Morfina/administração & dosagem , Entorpecentes/administração & dosagem , Ratos , Ratos Endogâmicos F344/genética , Ratos Endogâmicos F344/fisiologia , Ratos Endogâmicos Lew/genética , Ratos Endogâmicos Lew/fisiologia , Tempo de Reação , Receptores de Dopamina D1/genética , Receptores de N-Metil-D-Aspartato/genética , Reforço Psicológico , Autoadministração , Especificidade da EspécieRESUMO
The class I MHC allele HLA-B27 is highly associated with the human spondyloarthropathies, but the basis for this association remains poorly understood. Transgenic rats with high expression of HLA-B27 develop a multisystem inflammatory disease that includes arthritis and colitis. To investigate whether CD8alphabeta T cells are needed in this disease, we depleted these cells in B27 transgenic rats before the onset of disease by adult thymectomy plus short-term anti-CD8alpha mAb treatment. This treatment induced profound, sustained depletion of CD8alphabeta T cells, but failed to suppress either colitis or arthritis. To address the role of CD8alpha(+)beta(-) cells, we studied four additional groups of B27 transgenic rats treated with: 1) continuous anti-CD8alpha mAb, 2) continuous isotype-matched control mAb, 3) the thymectomy/pulse anti-CD8alpha regimen, or 4) no treatment. Arthritis occurred in approximately 40% of each group, but was most significantly reduced in severity in the anti-CD8alpha-treated group. In addition to CD8alphabeta T cells, two sizeable CD8alpha(+)beta(-) non-T cell populations were also reduced by the anti-CD8alpha treatment: 1) NK cells, and 2) a CD4(+)CD8(+)CD11b/c(+)CD161a(+)CD172a(+) monocyte population that became expanded in diseased B27 transgenic rats. These data indicate that HLA-B27-retricted CD8(+) T cells are unlikely to serve as effector cells in the transgenic rat model of HLA-B27-associated disease, in opposition to a commonly invoked hypothesis concerning the role of B27 in the spondyloarthropathies. The data also suggest that one or more populations of CD8alpha(+)beta(-) non-T cells may play a role in the arthritis that occurs in these rats.
Assuntos
Artrite Experimental/imunologia , Antígenos CD8/genética , Linfócitos T CD8-Positivos/imunologia , Colite/imunologia , Antígeno HLA-B27/genética , Subpopulações de Linfócitos T/imunologia , Transgenes/imunologia , Animais , Animais Geneticamente Modificados , Anticorpos Monoclonais/administração & dosagem , Anticorpos Monoclonais/farmacologia , Artrite Experimental/epidemiologia , Artrite Experimental/genética , Antígenos CD8/biossíntese , Antígenos CD8/imunologia , Colite/epidemiologia , Colite/genética , Doenças Inflamatórias Intestinais/genética , Doenças Inflamatórias Intestinais/imunologia , Depleção Linfocítica/métodos , Prevalência , Ratos , Ratos Endogâmicos Lew/genéticaRESUMO
An elevated urinary albumin excretion (UAE) is a risk factor for the development of chronic nephropathy and for cardiovascular mortality. The Munich Wistar Frömter (MWF) rat represents a genetic model that develops spontaneously mild hypertension and a 142-fold increased UAE compared with normal Lewis rats at 14 wk of age. The genetic basis of UAE in male MWF was analyzed in relation to BP by using a quantitative trait (QTL) mapping strategy. F1-hybrids generated from a cross between MWF and Lewis rats showed normal UAE rates similar to Lewis. A backcross strategy including 213 animals was therefore used. To account for age-of-onset effects, UAE was determined in young backcross animals at 8 wk and in adult animals at 14 and 24 wk of age, respectively. Total genome scan analysis identified three QTL with significant linkage to UAE and one QTL with suggestive linkage to UAE. These loci showed no linkage to BP, and BP explained only 2% of the total variance of UAE. Homozygosity for the MWF allele accounted for a similar mean increase in UAE in adult backcross animals at each UAE QTL. When single gene effects were analyzed, only one UAE QTL led to a significant increase in UAE. Early onset of albuminuria and a considerable increase of UAE in adult animals required homozygosity at three loci at least. This study demonstrates the polygenetic recessive determination of increased UAE by a set of genes that are unlinked to BP.