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1.
J Bacteriol ; 200(7)2018 04 01.
Artigo em Inglês | MEDLINE | ID: mdl-29339417

RESUMO

Septicemia-causing Vibrio vulnificus produces at least three exoproteases, VvpE, VvpS, and VvpM, all of which participate in interactions with human cells. Expression of VvpE and VvpS is induced in the stationary phase by multiple transcription factors, including sigma factor S, SmcR, and the cAMP-cAMP receptor protein (cAMP-CRP) complex. Distinct roles of VvpM, such as induction of apoptosis, lead us to hypothesize VvpM expression is different from that of the other exoproteases. Its transcription, which was found to be independent of sigma S, is induced at the early exponential phase and then becomes negligible upon entry into the stationary phase. SmcR and CRP were studied regarding the control of vvpM expression. Transcription of vvpM was repressed by SmcR and cAMP-CRP complex individually, which specifically bound to the regions -2 to +20 and +6 to +27, respectively, relative to the vvpM transcription initiation site. Derepression of vvpM gene expression was 10- to 40-fold greater in an smcR crp double mutant than in single-gene mutants. Therefore, these results show that the expression of V. vulnificus exoproteases is differentially regulated, and in this way, distinct proteases can engage in specific interactions with a host.IMPORTANCE An opportunistic human pathogen, Vibrio vulnificus produces multiple extracellular proteases that are involved in diverse interactions with a host. The total exoproteolytic activity is detected mainly in the supernatants of the high-cell-density cultures. However, some proteolytic activity derived from a metalloprotease, VvpM, was present in the supernatants of the low-cell-density cultures sampled at the early growth period. In this study, we present the regulatory mechanism for VvpM expression via repression by at least two transcription factors. This type of transcriptional regulation is the exact opposite of those for expression of the other V. vulnificus exoproteases. Differential regulation of each exoprotease's production then facilitates the pathogen's participation in the distinct interactions with a host.


Assuntos
Proteínas de Bactérias/biossíntese , Proteínas de Bactérias/genética , Regulação Bacteriana da Expressão Gênica , Metaloendopeptidases/biossíntese , Metaloendopeptidases/genética , Percepção de Quorum , Vibrio vulnificus/genética , Apoptose , Proteína Receptora de AMP Cíclico/metabolismo , Repressão Enzimática/genética , Humanos , Proteólise , Fatores de Transcrição/genética , Vibrio vulnificus/enzimologia
2.
J Biol Chem ; 288(45): 32720-32730, 2013 Nov 08.
Artigo em Inglês | MEDLINE | ID: mdl-24045949

RESUMO

Pituitary adenylate cyclase-activating polypeptide (PACAP) functions as a neuroprotective factor through the PACAP type 1 receptor, PAC1. In a previous work, we demonstrated that nerve growth factor augmented PAC1 gene expression through the activation of Sp1 via the Ras/MAPK pathway. We also observed that PAC1 expression in Neuro2a cells was transiently suppressed during in vitro ischemic conditions, oxygen-glucose deprivation (OGD). Because endoplasmic reticulum (ER) stress is induced by ischemia, we attempted to clarify how ER stress affects the expression of PAC1. Tunicamycin, which induces ER stress, significantly suppressed PAC1 gene expression, and salubrinal, a selective inhibitor of the protein kinase RNA-like endoplasmic reticulum kinase signaling pathway of ER stress, blocked the suppression. In luciferase reporter assay, we found that two Sp1 sites were involved in suppression of PAC1 gene expression due to tunicamycin or OGD. Immunocytochemical staining demonstrated that OGD-induced transglutaminase 2 (TG2) expression was suppressed by salubrinal or cystamine, a TG activity inhibitor. Further, the OGD-induced accumulation of cross-linked Sp1 in nuclei was suppressed by cystamine or salubrinal. Together with cystamine, R283, TG2-specific inhibitor, and siRNA specific for TG2 also ameliorated OGD-induced attenuation of PAC1 gene expression. These results suggest that Sp1 cross-linking might be crucial in negative regulation of PAC1 gene expression due to TG2 in OGD-induced ER stress.


Assuntos
Estresse do Retículo Endoplasmático , Proteínas de Ligação ao GTP/biossíntese , Sistema de Sinalização das MAP Quinases , Receptores de Polipeptídeo Hipofisário Ativador de Adenilato Ciclase/biossíntese , Elementos de Resposta , Fator de Transcrição Sp1/metabolismo , Transglutaminases/biossíntese , Animais , Antibacterianos/farmacologia , Hipóxia Celular/efeitos dos fármacos , Hipóxia Celular/genética , Linhagem Celular Tumoral , Cinamatos/farmacologia , Cistamina/farmacologia , Ativação Enzimática/efeitos dos fármacos , Indução Enzimática/efeitos dos fármacos , Indução Enzimática/genética , Inibidores Enzimáticos/farmacologia , Repressão Enzimática/efeitos dos fármacos , Repressão Enzimática/genética , Proteínas de Ligação ao GTP/antagonistas & inibidores , Proteínas de Ligação ao GTP/genética , Camundongos , Proteína 2 Glutamina gama-Glutamiltransferase , Receptores de Polipeptídeo Hipofisário Ativador de Adenilato Ciclase/genética , Fator de Transcrição Sp1/genética , Tioureia/análogos & derivados , Tioureia/farmacologia , Transglutaminases/antagonistas & inibidores , Transglutaminases/genética , Tunicamicina/farmacologia
3.
Nat Immunol ; 14(5): 461-9, 2013 May.
Artigo em Inglês | MEDLINE | ID: mdl-23525087

RESUMO

Inflammation is essential for host defense but can cause tissue damage and organ failure if unchecked. How the inflammation is resolved remains elusive. Here we report that the transcription factor Miz1 was required for terminating lipopolysaccharide (LPS)-induced inflammation. Genetic disruption of the Miz1 POZ domain, which is essential for the transactivation or repression activity of Miz1, resulted in hyperinflammation, lung injury and greater mortality in LPS-treated mice but a lower bacterial load and mortality in mice with Pseudomonas aeruginosa pneumonia. Loss of the Miz1 POZ domain prolonged the expression of proinflammatory cytokines. After stimulation, Miz1 was phosphorylated at Ser178, which was required for recruitment of the histone deacetylase HDAC1 to repress transcription of the gene encoding C/EBP-δ, an amplifier of inflammation. Our data provide a long-sought mechanism underlying the resolution of LPS-induced inflammation.


Assuntos
Lesão Pulmonar Aguda/imunologia , Proteína delta de Ligação ao Facilitador CCAAT/metabolismo , Proteínas Nucleares/metabolismo , Proteínas Inibidoras de STAT Ativados/metabolismo , Infecções por Pseudomonas/imunologia , Pseudomonas aeruginosa/imunologia , Lesão Pulmonar Aguda/genética , Animais , Citocinas/metabolismo , Repressão Enzimática/genética , Histona Desacetilase 1/metabolismo , Tolerância Imunológica , Inflamação/genética , Mediadores da Inflamação/metabolismo , Lipopolissacarídeos/imunologia , Camundongos , Camundongos Endogâmicos C57BL , Camundongos Mutantes , Mutagênese Sítio-Dirigida , Proteínas de Neoplasias/genética , Proteínas Nucleares/genética , Fosforilação , Proteínas Inibidoras de STAT Ativados/genética , Infecções por Pseudomonas/genética , Proteínas Repressoras/genética , Ativação Transcricional/genética , Ubiquitina-Proteína Ligases
4.
J Cell Sci ; 126(Pt 10): 2285-93, 2013 May 15.
Artigo em Inglês | MEDLINE | ID: mdl-23525006

RESUMO

Guided cell migration is a key mechanism for cell positioning in morphogenesis. The current model suggests that the spatially controlled activation of receptor tyrosine kinases (RTKs) by guidance cues limits Rac activity at the leading edge, which is crucial for establishing and maintaining polarized cell protrusions at the front. However, little is known about the mechanisms by which RTKs control the local activation of Rac. Here, using a multidisciplinary approach, we identify the GTP exchange factor (GEF) Vav as a key regulator of Rac activity downstream of RTKs in a developmentally regulated cell migration event, that of the Drosophila border cells (BCs). We show that elimination of the vav gene impairs BC migration. Live imaging analysis reveals that vav is required for the stabilization and maintenance of protrusions at the front of the BC cluster. In addition, activation of the PDGF/VEGF-related receptor (PVR) by its ligand the PDGF/PVF1 factor brings about activation of Vav protein by direct interaction with the intracellular domain of PVR. Finally, FRET analyses demonstrate that Vav is required in BCs for the asymmetric distribution of Rac activity at the front. Our results unravel an important role for the Vav proteins as signal transducers that couple signalling downstream of RTKs with local Rac activation during morphogenetic movements.


Assuntos
Drosophila melanogaster/fisiologia , Proteínas Proto-Oncogênicas c-akt/metabolismo , Proteínas Proto-Oncogênicas c-vav/metabolismo , Animais , Animais Geneticamente Modificados , Movimento Celular/genética , Extensões da Superfície Celular/genética , Células Cultivadas , Drosophila melanogaster/citologia , Embrião não Mamífero/citologia , Embrião não Mamífero/metabolismo , Repressão Enzimática/genética , Feminino , Morfogênese/genética , Proteínas Proto-Oncogênicas c-vav/genética , RNA Interferente Pequeno/genética , Deleção de Sequência/genética , Técnicas do Sistema de Duplo-Híbrido
5.
J Cell Sci ; 126(Pt 6): 1517-30, 2013 Mar 15.
Artigo em Inglês | MEDLINE | ID: mdl-23418359

RESUMO

To study the physiological role of a single microRNA (miRNA), we generated transgenic mice expressing the miRNA precursor miR-17 and found that the mature miR-17-5p and the passenger strand miR-17-3p were abundantly expressed. We showed that mature miR-17-5p and passenger strand miR-17-3p could synergistically induce the development of hepatocellular carcinoma. The mature miR-17-5p exerted this function by repressing the expression of PTEN. In contrast, the passenger strand miR-17-3p repressed expression of vimentin, an intermediate filament with the ability to modulate metabolism, and GalNT7, an enzyme that regulates metabolism of liver toxin galactosamine. Hepatocellular carcinoma cells, HepG2, transfected with miR-17 formed larger tumors with more blood vessels and less tumor cell death than mock-treated cells. Expression of miR-17 precursor modulated HepG2 proliferation, migration, survival, morphogenesis and colony formation and inhibited endothelial tube formation. Silencing of PTEN, vimentin or GalNT7 with their respective siRNAs enhanced proliferation and migration. Re-expressing these molecules reversed their roles in proliferation, migration and tumorigenesis. Further experiments indicated that these three molecules do not interact with each other, but appear to function in different signaling pathways. Our results demonstrated that a mature miRNA can function synergistically with its passenger strand leading to the same phenotype but by regulating different targets located in different signaling pathways. We anticipate that our assay will serve as a helpful model for studying miRNA regulation.


Assuntos
Carcinoma Hepatocelular/genética , Neoplasias Hepáticas/genética , MicroRNAs/metabolismo , N-Acetilgalactosaminiltransferases/metabolismo , PTEN Fosfo-Hidrolase/metabolismo , Vimentina/metabolismo , Animais , Carcinogênese/genética , Repressão Enzimática/genética , Regulação Neoplásica da Expressão Gênica , Células Hep G2 , Humanos , Camundongos , Camundongos Transgênicos , MicroRNAs/genética , N-Acetilgalactosaminiltransferases/genética , PTEN Fosfo-Hidrolase/genética , Transdução de Sinais , Transgenes/genética , Ensaio Tumoral de Célula-Tronco , Vimentina/genética , Polipeptídeo N-Acetilgalactosaminiltransferase
6.
Cell Stem Cell ; 10(5): 531-43, 2012 May 04.
Artigo em Inglês | MEDLINE | ID: mdl-22560077

RESUMO

The subventricular zone (SVZ) neural stem cell niche contains mixed populations of stem cells, transit-amplifying cells, and migrating neuroblasts. Deciphering how endogenous signals, such as hormones, affect the balance between these cell types is essential for understanding the physiology of niche plasticity and homeostasis. We show that Thyroid Hormone (T(3)) and its receptor, TRα1, are directly involved in maintaining this balance. TRα1 is expressed in amplifying and migrating cells. In vivo gain- and loss-of-function experiments demonstrate first, that T(3)/TRα1 directly repress Sox2 expression, and second, that TRα1 overexpression in the niche favors the appearance of DCX+ migrating neuroblasts. Lack of TRα increases numbers of SOX2+ cells in the SVZ. Hypothyroidism increases proportions of cells in interphase. Thus, in the adult SVZ, T(3)/TRα1 together favor neural stem cell commitment and progression toward a migrating neuroblast phenotype; this transition correlates with T(3)/TRα1-dependent transcriptional repression of Sox2.


Assuntos
Células-Tronco Adultas/fisiologia , Células-Tronco Neurais/fisiologia , Neurogênese/genética , Fatores de Transcrição SOXB1/metabolismo , Receptores alfa dos Hormônios Tireóideos/metabolismo , Hormônios Tireóideos/metabolismo , Animais , Movimento Celular/genética , Proteína Duplacortina , Repressão Enzimática/genética , Camundongos , Camundongos Mutantes , RNA Interferente Pequeno/genética , Fatores de Transcrição SOXB1/genética , Transdução de Sinais , Nicho de Células-Tronco/genética , Receptores alfa dos Hormônios Tireóideos/genética , Hormônios Tireóideos/genética , Transgenes/genética
7.
Bull Math Biol ; 71(2): 453-514, 2009 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-19067083

RESUMO

During batch growth on mixtures of two growth-limiting substrates, microbes consume the substrates either sequentially (diauxie) or simultaneously. The ubiquity of these growth patterns suggests that they may be driven by a universal mechanism common to all microbial species. Recently, we showed that a minimal model accounting only for enzyme induction and dilution, the two processes that occur in all microbes, explains the phenotypes observed in batch cultures of various wild-type and mutant/recombinant cells (Narang and Pilyugin in J. Theor. Biol. 244:326-348, 2007). Here, we examine the extension of the minimal model to continuous cultures. We show that: (1) Several enzymatic trends, attributed entirely to cross-regulatory mechanisms, such as catabolite repression and inducer exclusion, can be quantitatively explained by enzyme dilution. (2) The bifurcation diagram of the minimal model for continuous cultures, which classifies the substrate consumption pattern at any given dilution rate and feed concentrations, provides a precise explanation for the empirically observed correlations between the growth patterns in batch and continuous cultures. (3) Numerical simulations of the model are in excellent agreement with the data. The model captures the variation of the steady state substrate concentrations, cell densities, and enzyme levels during the single- and mixed-substrate growth of bacteria and yeasts at various dilution rates and feed concentrations. This variation is well approximated by simple analytical expressions that furnish deep physical insights. (4) Since the minimal model describes the behavior of the cells in the absence of cross-regulatory mechanisms, it provides a rigorous framework for quantifying the effect of these mechanisms. We illustrate this by analyzing several data sets from the literature.


Assuntos
Bactérias/crescimento & desenvolvimento , Bactérias/genética , Reatores Biológicos/microbiologia , Regulação Bacteriana da Expressão Gênica , Leveduras/crescimento & desenvolvimento , Leveduras/genética , Bactérias/enzimologia , Técnicas de Cultura de Células , Indução Enzimática/genética , Repressão Enzimática/genética , Metabolismo/genética , Leveduras/enzimologia
8.
Aging Cell ; 7(5): 609-21, 2008 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-18616636

RESUMO

The proliferative lifespan of normal somatic human cells in culture terminates in a permanent growth-arrested state known as replicative senescence. In this study, we show that RNA interference-mediated repression of the genes encoding the small ubiquitin-related modifier (SUMO)-specific proteases, Senp1, Senp2, and Senp7, induced low passage primary human fibroblasts to senesce rapidly. Following Senp1 repression, we observed a global increase in sumoylated proteins and in the number and size of nuclear SUMO-containing promyelocytic leukemia (PML) bodies. SUMO/PML bodies also increased during replicative senescence. p53 transcriptional activity was enhanced towards known p53 target genes following repression of Senp1, and inhibition of p53 function prevented senescence after Senp1 repression. These data indicate that Senp1 repression induces p53-mediated premature senescence and that SUMO proteases may thus be required for proliferation of normal human cells.


Assuntos
Envelhecimento/patologia , Regulação para Baixo/fisiologia , Endopeptidases/metabolismo , Fibroblastos/patologia , Proteína SUMO-1/metabolismo , Proteína Supressora de Tumor p53/fisiologia , Idoso , Envelhecimento/genética , Envelhecimento/metabolismo , Proliferação de Células , Células Cultivadas , Cisteína Endopeptidases/biossíntese , Cisteína Endopeptidases/metabolismo , Regulação para Baixo/genética , Endopeptidases/biossíntese , Endopeptidases/genética , Repressão Enzimática/genética , Repressão Enzimática/fisiologia , Fibroblastos/enzimologia , Fibroblastos/metabolismo , Humanos , Interferência de RNA/fisiologia , Proteína Supressora de Tumor p53/antagonistas & inibidores
9.
J Bacteriol ; 189(3): 741-9, 2007 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-17122350

RESUMO

The interruption of the sblA gene of Streptomyces lividans was previously shown to lead to relief of glucose repression of the normally strongly glucose-repressed alpha-amylase gene. In addition to this relief, an early entry into stationary phase was observed when cells were grown in a minimal medium containing glucose as the main carbon source. In this study, we established that this mutant does not resume growth after the transition phase when cultured in the complex glucose-rich liquid medium R2YE and sporulates much earlier than the wild-type strain when plated on solid R2YE. These phenotypic differences, which were abolished when glucose was omitted from the R2YE medium, correlated with a reduced glucose uptake ability of the sblA mutant strain. sblA was shown to encode a bifunctional enzyme possessing phospholipase C-like and phosphoinositide phosphatase activities. The cleavage of phosphoinositides by SblA seems necessary to trigger the glucose-dependent renewed growth that follows the transition phase. The transient expression of sblA that takes place just before the transition phase is consistent with a regulatory role for this gene during the late stages of growth. The tight temporal control of sblA expression was shown to depend on two operator sites. One, located just upstream of the -35 promoter region, likely constitutes a repressor binding site. The other, located 170 bp downstream of the GTG sblA translational start codon, may be involved in the regulation of the degradation of the sblA transcript. This study suggests that phosphoinositides constitute important regulatory molecules in Streptomyces, as they do in eukaryotes.


Assuntos
Glucose/metabolismo , Fosfatidilinositóis/metabolismo , Streptomyces lividans/metabolismo , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Repressão Enzimática/genética , Repressão Enzimática/fisiologia , Regulação Bacteriana da Expressão Gênica , Modelos Genéticos , Mutagênese Sítio-Dirigida , Mutação , Proteínas Recombinantes de Fusão/genética , Proteínas Recombinantes de Fusão/metabolismo , Proteínas Recombinantes de Fusão/fisiologia , Streptomyces lividans/genética , Streptomyces lividans/crescimento & desenvolvimento , alfa-Amilases/genética , alfa-Amilases/metabolismo
10.
Proc Natl Acad Sci U S A ; 103(41): 15044-9, 2006 Oct 10.
Artigo em Inglês | MEDLINE | ID: mdl-17005718

RESUMO

Maf1 is an essential and specific mediator of transcriptional repression in the RNA polymerase (pol) III system. Maf1-dependent repression occurs in response to a wide range of conditions, suggesting that the protein itself is targeted by the major nutritional and stress-signaling pathways. We show that Maf1 is a substrate for cAMP-dependent PKA in vitro and is differentially phosphorylated on PKA sites in vivo under normal versus repressing conditions. PKA activity negatively regulates Maf1 function because strains with unregulated high PKA activity block repression of pol III transcription in vivo, and strains lacking all PKA activity are hyperrepressible. Nuclear accumulation of Maf1 is required for transcriptional repression and is regulated by two nuclear localization sequences in the protein. An analysis of PKA phosphosite mutants shows that the localization of Maf1 is affected via the N-terminal nuclear localization sequence. In particular, mutations that prevent phosphorylation at PKA consensus sites promote nuclear accumulation of Maf1 without inducing repression. These results indicate that negative regulation of Maf1 by PKA is achieved by inhibiting its nuclear import and suggest that a PKA-independent activation step is required for nuclear Maf1 to function in the repression of pol III transcription. Finally, we report a previously undescribed phenotype for Maf1 in tRNA gene-mediated silencing of nearby RNA pol II transcription.


Assuntos
Núcleo Celular/metabolismo , Proteínas Quinases Dependentes de AMP Cíclico/química , RNA Polimerase III/genética , Proteínas de Saccharomyces cerevisiae/metabolismo , Fatores de Transcrição/metabolismo , Transcrição Gênica/fisiologia , Transporte Ativo do Núcleo Celular/genética , Núcleo Celular/genética , Proteínas Quinases Dependentes de AMP Cíclico/fisiologia , Repressão Enzimática/genética , Sinais de Localização Nuclear/química , Sinais de Localização Nuclear/genética , RNA Polimerase III/antagonistas & inibidores , RNA Polimerase III/biossíntese , Saccharomyces cerevisiae/enzimologia , Saccharomyces cerevisiae/genética , Proteínas de Saccharomyces cerevisiae/genética , Fatores de Transcrição/genética
11.
Mol Cell ; 22(5): 623-32, 2006 Jun 09.
Artigo em Inglês | MEDLINE | ID: mdl-16762835

RESUMO

We report genome-wide analyses that establish Maf1 as a general and direct repressor of yeast RNA polymerase (Pol) III transcription. Chromatin immunoprecipitation (ChIP) coupled to microarray hybridization experiments showed an increased association of Maf1 to Pol III-transcribed genes under repressing condition (rapamycin treatment) correlated with a dissociation of Brf1 and Pol III. Maf1 can exist in various phosphorylation states and interacts with Pol III in a dephosphorylated state. The largest subunit of Pol III, C160, was identified as a target of Maf1. Under repressing conditions, Maf1 is dephosphorylated and accumulates in the nucleus, and Pol III-Maf1 interaction increases. Mutations in protein phosphatase type 2A (PP2A) catalytic subunit-encoding genes prevented rapamycin-induced Maf1 dephosphorylation, its nuclear accumulation, and repression of Pol III transcription. The results indicate that Pol III transcription can be globally and rapidly downregulated via dephosphorylation and relocation of a general negative cofactor.


Assuntos
Regulação Fúngica da Expressão Gênica , Fosfoproteínas Fosfatases/metabolismo , RNA Polimerase III/antagonistas & inibidores , Proteínas de Saccharomyces cerevisiae/metabolismo , Fatores de Transcrição/metabolismo , Transcrição Gênica , Núcleo Celular/efeitos dos fármacos , Núcleo Celular/metabolismo , Regulação para Baixo , Repressão Enzimática/genética , Sinais de Localização Nuclear/metabolismo , Fosforilação , Subunidades Proteicas/metabolismo , RNA Polimerase III/metabolismo , Transdução de Sinais , Sirolimo/metabolismo , Sirolimo/farmacologia , Fator de Transcrição TFIIIB/metabolismo
12.
Mol Cell ; 22(5): 633-44, 2006 Jun 09.
Artigo em Inglês | MEDLINE | ID: mdl-16762836

RESUMO

Nutrient deprivation and various stress conditions repress RNA polymerase III (Pol III) transcription in S. cerevisiae. The signaling pathways that relay stress and nutrient conditions converge on the conserved protein Maf1, but how Maf1 integrates environmental conditions and couples them to transcriptional repression is largely unknown. Here, we demonstrate that Maf1 is phosphorylated in favorable conditions, whereas diverse unfavorable conditions lead to rapid Maf1 dephosphorylation, nuclear localization, physical association of dephosphorylated Maf1 with Pol III, and Maf1 targeting to Pol III-transcribed genes genome wide. Furthermore, Maf1 mutants defective in full dephosphorylation display maf1Delta phenotypes and are compromised for both nuclear localization and Pol III association. Repression conditions also promote TFIIIB-TFIIIC interactions in crosslinked chromatin. Taken together, Maf1 appears to integrate environmental conditions and signaling pathways through its phosphorylation state, with stress leading to dephosphorylation, association with Pol III at target loci, alterations in basal factor interactions, and transcriptional repression.


Assuntos
RNA Polimerase III/metabolismo , Proteínas de Saccharomyces cerevisiae/metabolismo , Saccharomyces cerevisiae/genética , Fatores de Transcrição/metabolismo , Transcrição Gênica , Sequência de Aminoácidos , Animais , Núcleo Celular/metabolismo , Repressão Enzimática/genética , Repressão Enzimática/fisiologia , Regulação Fúngica da Expressão Gênica , Genoma Fúngico , Humanos , Modelos Biológicos , Dados de Sequência Molecular , Análise de Sequência com Séries de Oligonucleotídeos , Fosforilação , Mutação Puntual , RNA Polimerase III/genética , Saccharomyces cerevisiae/metabolismo , Proteínas de Saccharomyces cerevisiae/genética , Fatores de Transcrição/genética
13.
Genetics ; 172(3): 1427-39, 2006 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-16361229

RESUMO

The Saccharomyces casein kinase 1 isoforms encoded by the essential gene pair YCK1 and YCK2 control cell growth and morphogenesis and are linked to the endocytosis of several membrane proteins. Here we define roles for the Yck1,2 kinases in Mal61p maltose permease activation and trafficking, using a yck1delta yck2-2(ts) (yck(ts)) strain with conditional Yck activity. Moreover, we provide evidence that Glc7-Reg1 phosphatase acts as an upstream activator of Yck1,2 kinases in a novel signaling pathway that modulates kinase activity in response to carbon source availability. The yck(ts) strain exhibits significantly reduced maltose transport activity despite apparently normal levels and cell surface localization of maltose permease protein. Glucose-induced internalization and rapid loss of maltose transport activity of Mal61/HAp-GFP are not observed in the yck(ts) strain and maltose permease proteolysis is blocked. We show that a reg1delta mutant exhibits a phenotype remarkably similar to that conferred by yck(ts). The reg1delta phenotype is not enhanced in the yck(ts) reg1delta double mutant and is suppressed by increased Yck1,2p dosage. Further, although Yck2p localization and abundance do not change in the reg1delta mutant, Yck1,2 kinase activity, as assayed by glucose-induced HXT1 expression and Mth1 repressor stability, is substantially reduced in the reg1delta strain.


Assuntos
Caseína Quinase I/fisiologia , Glucose/fisiologia , Proteínas de Transporte de Monossacarídeos/antagonistas & inibidores , Proteínas de Transporte de Monossacarídeos/metabolismo , Proteína Fosfatase 1/fisiologia , Proteínas de Saccharomyces cerevisiae/fisiologia , Transdução de Sinais/fisiologia , Carbono/química , Carbono/metabolismo , Caseína Quinase I/química , Caseína Quinase I/metabolismo , Endopeptidases/fisiologia , Complexos Endossomais de Distribuição Requeridos para Transporte , Repressão Enzimática/genética , Epistasia Genética , Glucose/química , Mutação , Proteína Fosfatase 1/genética , Transporte Proteico/genética , Saccharomyces/enzimologia , Proteínas de Saccharomyces cerevisiae/química , Proteínas de Saccharomyces cerevisiae/genética , Proteínas de Saccharomyces cerevisiae/metabolismo , Transdução de Sinais/genética , Ubiquitina/metabolismo , Ubiquitina Tiolesterase
14.
Mol Biol (Mosk) ; 40(6): 1047-54, 2006.
Artigo em Russo | MEDLINE | ID: mdl-17209433

RESUMO

Lung cancer is one of the most frequent neoplasia in the Russia, the United States and Europe. This cancer is associated with functional activity changes of many genes. In the present study TIMP3, DAPK1 and AKR1B10 genes transcription analysis of squamous cell lung cancer specimens was carried out using reverse transcription-PCR. Substantial increasing of AKR1B10 transcription level is revealed in 80% tumor samples. TIMP3 and DAPK1 transcription level is considerably decreased in 76 and 72% tumor specimens, accordingly. These results may point out that all three genes are important for squamous cell lung cancer tumorogenesis while AKR1B10 is potential oncogene whereas TIMP3 and DAPK1 are potential tumor suppressor genes. We suggest that revealed substantial transcription level-changes of investigated genes may be used for oncodiagnostics.


Assuntos
Aldeído Redutase/genética , Proteínas Reguladoras de Apoptose/genética , Proteínas Quinases Dependentes de Cálcio-Calmodulina/genética , Carcinoma Pulmonar de Células não Pequenas/genética , Neoplasias Pulmonares/genética , Inibidor Tecidual de Metaloproteinase-3/genética , Adulto , Idoso , Aldeído Redutase/biossíntese , Aldo-Ceto Redutases , Proteínas Reguladoras de Apoptose/biossíntese , Proteínas Quinases Dependentes de Cálcio-Calmodulina/biossíntese , Carcinoma Pulmonar de Células não Pequenas/enzimologia , Proteínas Quinases Associadas com Morte Celular , Indução Enzimática/genética , Repressão Enzimática/genética , Feminino , Regulação Neoplásica da Expressão Gênica , Humanos , Neoplasias Pulmonares/enzimologia , Masculino , Pessoa de Meia-Idade , Inibidor Tecidual de Metaloproteinase-3/biossíntese , Transcrição Gênica
15.
J Biol Chem ; 280(18): 18452-61, 2005 May 06.
Artigo em Inglês | MEDLINE | ID: mdl-15743775

RESUMO

Here we investigated the regulatory mechanism of lipocalin-type prostaglandin D synthase (L-PGDS) gene expression in human TE671 (medulloblastoma of cerebellum) cells. Reporter analysis of the promoter region from -730 to +75 of the human L-PGDS gene demonstrated that deletion or mutation of the N-box at -337 increased the promoter activity 220-300%. The N-box was bound by Hes-1, a mammalian homologue of Drosophila Hairy and enhancer of split, as examined by electrophoretic mobility shift assay and chromatin immunoprecipitation assay. Functional expression of the Notch intracellular domain significantly increased Hes-1 expression and decreased L-PGDS expression level in TE671 cells. Moreover, knock-down of Hes-1 mRNA by RNA interference significantly enhanced the L-PGDS mRNA level, indicating that the L-PGDS gene expression is repressed by the Notch-Hes signaling. When the AP-2 element at -98 of the promoter region was deleted or mutated, the promoter activity was drastically decreased to approximately 10% of normal. The AP-2 element was bound by AP-2beta dominantly expressed in TE671 cells, according to the results of electrophoretic mobility shift assay and chromatin immunoprecipitation assay. L-PGDS expression was induced by 12-O-tetradecanoylphorbol-13-acetate in TE671 cells, and this induction was inhibited by a protein kinase C inhibitor. Stimulation of TE671 cells with 12-O-tetradecanoylphorbol-13-acetate or transfection with protein kinase Calpha expression vector induced phosphorylation of Hes-1, inhibition of DNA binding of Hes-1 to the N-box, and activation of the AP-2beta function to up-regulate L-PGDS gene expression. These results reveal a novel transcriptional regulatory mechanism responsible for the high level expression of the human L-PGDS gene in TE671 cells.


Assuntos
Proteínas de Ligação a DNA/fisiologia , Regulação Enzimológica da Expressão Gênica/fisiologia , Proteínas de Homeodomínio/metabolismo , Oxirredutases Intramoleculares/genética , Meduloblastoma/enzimologia , Proteínas de Membrana/fisiologia , Proteína Quinase C/fisiologia , Transdução de Sinais/genética , Fatores de Transcrição/fisiologia , Fatores de Transcrição Hélice-Alça-Hélice Básicos , Encéfalo/metabolismo , Encéfalo/patologia , Linhagem Celular Tumoral , Proteínas de Ligação a DNA/genética , Repressão Enzimática/efeitos dos fármacos , Repressão Enzimática/genética , Proteínas de Homeodomínio/antagonistas & inibidores , Proteínas de Homeodomínio/genética , Humanos , Oxirredutases Intramoleculares/antagonistas & inibidores , Oxirredutases Intramoleculares/metabolismo , Lipocalinas , Meduloblastoma/genética , Meduloblastoma/patologia , Proteínas de Membrana/antagonistas & inibidores , Proteínas de Membrana/genética , Estrutura Terciária de Proteína/genética , Interferência de RNA , RNA Mensageiro/biossíntese , Receptores Notch , Proteínas Repressoras/antagonistas & inibidores , Proteínas Repressoras/genética , Proteínas Repressoras/metabolismo , Transdução de Sinais/efeitos dos fármacos , Acetato de Tetradecanoilforbol/farmacologia , Fator de Transcrição AP-2 , Fatores de Transcrição HES-1 , Fatores de Transcrição/genética
16.
Histol Histopathol ; 20(1): 53-7, 2005 01.
Artigo em Inglês | MEDLINE | ID: mdl-15578422

RESUMO

This paper describes a polymer site-specific delivery system containing human growth hormone in an in vivo model of scarring in the diabetic state. Copolymer discs with the hormone were introduced into incisions made in rats previously injected with streptozotocin in order to induce diabetes. Tissue specimens for evaluation were obtained at 3, 7 or 10 days after the procedure. Study groups were healthy rats and diabetic rats untreated or treated with/without the hormone. Histological sections were prepared for light microscopy examination of wound zones. Three and 7 days after surgery, polymer remains could be observed in the subcutaneous tissue. These remnants induced a moderate foreign body reaction. The number of macrophages detected was directly related to neovessel formation and metalloelastase expression. The CD4+/CD8+ ratio was low during the initial follow up stages (3 and 7 days) in untreated diabetic rats, yet an increased ratio corresponding to areas around the polymer remains was noted in the animals treated with copolymer loaded with the growth hormone. Copolymer is biodegradable in vivo and may be used as a vehicle for the slow release of active substances. The presence of the hormone at the site of skin injury induces cell proliferation and enhances the repair process.


Assuntos
Cicatriz/metabolismo , Diabetes Mellitus Experimental/metabolismo , Substâncias de Crescimento/farmacologia , Hormônio do Crescimento Humano/farmacologia , Inflamação/metabolismo , Animais , Modelos Animais de Doenças , Repressão Enzimática/genética , Repressão Enzimática/fisiologia , Humanos , Masculino , Metaloproteinase 12 da Matriz , Metaloendopeptidases/biossíntese , Metaloendopeptidases/genética , Neovascularização Fisiológica/efeitos dos fármacos , Ratos , Ratos Wistar
17.
Mol Biochem Parasitol ; 138(2): 165-70, 2004 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-15555728

RESUMO

We describe the successful use of RNA interference (RNAi) to investigate gene function in the human filarial parasite Onchocerca volvulus third-stage larvae (L3). We targeted two specific gene products, the O. volvulus cathepsin L (Ov-CPL) and cathepsin Z-like (Ov-CPZ) cysteine proteases, which were proposed to function during O. volvulus L3 molting. We show that fluorescent-labeled Cy3-dsRNA corresponding to cpl or cpz regions encoding the mature enzymes can enter the larvae. The molting rate of larvae treated overnight with 0.5 mg ml(-1) cpl was reduced by 92% and 86% in comparison to normal control worms. It appeared that although the larvae started the molting process the last stage of molting, ecdysis was inhibited. The effect was gene specific, as larvae that did not molt in the presence of cpl or cpz dsRNA expressed the other cysteine protease, CPZ and CPL, respectively. This was confirmed by immunoelectron microscopy using antibodies directed against each enzyme. Our present study validate conclusively that both enzymes are essential for the molting of O. volvulus L3 to fourth-stage larvae. We also confirmed that the activity of the enzymes is specific to the changes that occur during the molting process on days 1-3, when the separation between the cuticles is in progress. The development of RNAi in O. volvulus L3 could further help study many of the abundant L3 and molting L3 genes identified through the filarial genome project, many of which, although have no attributed function, were identified as vaccine candidates or potential drug targets.


Assuntos
Catepsinas/fisiologia , Cisteína Endopeptidases/fisiologia , Muda , Onchocerca volvulus/enzimologia , Onchocerca volvulus/crescimento & desenvolvimento , Interferência de RNA , Animais , Sequência de Bases , Catepsina K , Catepsina L , Catepsina Z , Catepsinas/genética , Cisteína Endopeptidases/genética , Repressão Enzimática/genética , Genes de Helmintos , Larva/enzimologia , Larva/genética , Larva/crescimento & desenvolvimento , Microscopia Eletrônica , Microscopia Imunoeletrônica , Dados de Sequência Molecular , Onchocerca volvulus/efeitos dos fármacos , Onchocerca volvulus/genética , RNA de Cadeia Dupla/genética , RNA de Cadeia Dupla/metabolismo , Pele/ultraestrutura
18.
Biochemistry ; 43(41): 13115-28, 2004 Oct 19.
Artigo em Inglês | MEDLINE | ID: mdl-15476405

RESUMO

Prokaryotic MutS and eukaryotic Msh proteins recognize base pair mismatches and insertions or deletions in DNA and initiate mismatch repair. These proteins function as dimers (and perhaps higher order oligomers) and possess an ATPase activity that is essential for DNA repair. Previous studies of Escherichia coli MutS and eukaryotic Msh2-Msh6 proteins have revealed asymmetry within the dimer with respect to both DNA binding and ATPase activities. We have found the Thermus aquaticus MutS protein amenable to detailed investigation of the nature and role of this asymmetry. Here, we show that (a) in a MutS dimer one subunit (S1) binds nucleotide with high affinity and the other (S2) with 10-fold weaker affinity, (b) S1 hydrolyzes ATP rapidly while S2 hydrolyzes ATP at a 30-50-fold slower rate, (c) mismatched DNA binding to MutS inhibits ATP hydrolysis at S1 but slow hydrolysis continues at S2, and (d) interaction between mismatched DNA and MutS is weakened when both subunits are occupied by ATP but remains stable when S1 is occupied by ATP and S2 by ADP. These results reveal key MutS species in the ATPase pathway; S1(ADP)-S2(ATP) is formed preferentially in the absence of DNA or in the presence of fully matched DNA, while S1(ATP)-S2(ATP) and S1(ATP)-S2(ADP) are formed preferentially in the presence of mismatched DNA. These MutS species exhibit differences in interaction with mismatched DNA that are likely important for the mechanism of MutS action in DNA repair.


Assuntos
Adenosina Trifosfatases/química , Trifosfato de Adenosina/análogos & derivados , Trifosfato de Adenosina/química , Proteínas de Bactérias/química , Pareamento Incorreto de Bases , DNA Bacteriano/química , Proteínas de Ligação a DNA/química , Thermus/enzimologia , Difosfato de Adenosina/química , Adenosina Trifosfatases/antagonistas & inibidores , Adenosina Trifosfatases/genética , Proteínas de Bactérias/antagonistas & inibidores , Proteínas de Bactérias/genética , Pareamento Incorreto de Bases/genética , DNA Bacteriano/genética , Proteínas de Ligação a DNA/antagonistas & inibidores , Proteínas de Ligação a DNA/genética , Dimerização , Repressão Enzimática/genética , Proteínas de Escherichia coli , Hidrólise , Cinética , Proteína MutS de Ligação de DNA com Erro de Pareamento , Mutagênese Insercional , Ligação Proteica/genética , Subunidades Proteicas/química , Subunidades Proteicas/genética , Thermus/genética
19.
Can J Microbiol ; 50(2): 113-9, 2004 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-15052313

RESUMO

Cellobiose dehydrogenase production in Trametes versicolor is repressed when additional carbon sources, such as glucose, maltose, galactose, arabinose, and xylose, are added to the fungal cultures growing on cellulose. Real-time quantitative reverse transcription-polymerase chain reaction has been used to demonstrate that the addition of galactose, arabinose, and xylose results in 19-, 92-, and 114-fold reductions, respectively, in cdh transcript levels 96 h post-addition. Glucose exhibits the greatest repressive effect, resulting in a 3400-fold decrease in cdh transcript levels.


Assuntos
Desidrogenases de Carboidrato/genética , Metabolismo dos Carboidratos , Regulação Fúngica da Expressão Gênica/genética , Polyporales/enzimologia , Polyporales/genética , Transcrição Gênica , Arabinose/metabolismo , Desidrogenases de Carboidrato/metabolismo , Repressão Enzimática/genética , Repressão Enzimática/fisiologia , Galactose/metabolismo , Regulação Fúngica da Expressão Gênica/fisiologia , Glucose/metabolismo , Maltose/metabolismo , Reação em Cadeia da Polimerase/métodos , RNA Fúngico/análise , RNA Fúngico/isolamento & purificação , RNA Mensageiro/análise , RNA Mensageiro/isolamento & purificação , Xilose/metabolismo
20.
Mol Pharmacol ; 64(3): 764-72, 2003 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-12920214

RESUMO

Cardiac expression of genes involved in fatty acid metabolism may suffer alterations depending on the substrate availability. We studied how troglitazone, an antidiabetic drug that selectively activates peroxisome proliferator-activated receptor gamma (PPARgamma), affected the expression of several of these genes. A single-day troglitazone administration (100 mg/kg/day) did not significantly alter plasma free fatty acids or triglyceride levels. In contrast, a 10-day period of troglitazone treatment significantly reduced plasma free fatty acids and triglyceride levels by 74% (P < 0.001) and 56% (P < 0.01), respectively. Cardiac mRNA expression of acyl-CoA oxidase (ACO) increased (8.3-fold induction) after 1-day troglitazone treatment, whereas after 10 days of treatment ACO mRNA levels were dramatically reduced (98% reduction, P < 0.02), as well as those of uncoupling protein 3 (41% reduction, P = 0.05). The mRNA expression of PPARalpha and several PPAR target genes, such as medium chain acyl-CoA dehydrogenase or fatty acid translocase were not altered after 10 days of troglitazone treatment, whereas muscle-type carnitine palmitoyltransferase I increased 1.7-fold (P < 0.05). The reduction in ACO expression in the hearts of 10-day troglitazone-treated mice was accompanied by an increase in the protein levels of the transcriptional repressor chicken ovalbumin upstream promoter transcription factor II (COUP-TF II). Electrophoretic mobility shift assays performed with COUP-TF II antibody to examine its interaction with a labeled peroxisome proliferator response element probe showed enhanced binding of COUP-TFII in cardiac nuclear extracts from troglitazone-treated mice for 10 days but not in the control nuclear extracts. Overall, the findings presented here show that 10 days of troglitazone treatment decreased expression of the ACO gene through a mechanism involving the transcriptional repressor COUP-TF II.


Assuntos
Cromanos/farmacologia , Proteínas de Ligação a DNA/fisiologia , Regulação para Baixo/efeitos dos fármacos , Regulação para Baixo/fisiologia , Miocárdio/enzimologia , Oxirredutases/biossíntese , Oxirredutases/genética , Receptores de Esteroides , Proteínas Repressoras/fisiologia , Tiazóis/farmacologia , Tiazolidinedionas , Fatores de Transcrição/fisiologia , Acil-CoA Oxidase , Animais , Fator II de Transcrição COUP , Fatores de Transcrição COUP , Galinhas , Cromanos/administração & dosagem , Proteínas de Ligação a DNA/genética , Repressão Enzimática/efeitos dos fármacos , Repressão Enzimática/genética , Masculino , Camundongos , Miocárdio/metabolismo , Proteínas Repressoras/genética , Tiazóis/administração & dosagem , Fatores de Transcrição/genética , Troglitazona
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