High-throughput genotyping of Salmonella enterica serovar Typhi allowing geographical assignment of haplotypes and pathotypes within an urban District of Jakarta, Indonesia.

Baker, Stephen; Holt, Kathryn; van de Vosse, Esther; Roumagnac, Philippe; Whitehead, Sally; King, Emma; Ewels, Philip; Keniry, Andrew; Weill, François-Xavier; Lightfoot, Diane; van Dissel, Jaap T; Sanderson, Kenneth E; Farrar, Jeremy; Achtman, Mark; Deloukas, Panagiotis; Dougan, Gordon

Baker, Stephen; Holt, Kathryn; van de Vosse, Esther; Roumagnac, Philippe; Whitehead, Sally; King, Emma; Ewels, Philip; Keniry, Andrew; Weill, François-Xavier; Lightfoot, Diane; van Dissel, Jaap T; Sanderson, Kenneth E; Farrar, Jeremy; Achtman, Mark; Deloukas, Panagiotis; Dougan, Gordon.

Affiliation

Baker S; The Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, United Kingdom. sbaker@oucru.org

J Clin Microbiol ; 46(5): 1741-6, 2008 May.

Article in En | MEDLINE | ID: mdl-18322069

Subject(s)

Bacterial Typing Techniques/methods; DNA, Bacterial/genetics; Salmonella typhi/classification; Salmonella typhi/genetics; Typhoid Fever/epidemiology; Typhoid Fever/microbiology; Demography; Flagellin/genetics; Genotype; Haplotypes; Humans; Indonesia/epidemiology; Molecular Epidemiology/methods; Phylogeny; Polymorphism, Genetic; Salmonella typhi/isolation & purification; Urban Population

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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Salmonella typhi / Typhoid Fever / DNA, Bacterial / Bacterial Typing Techniques Type of study: Prognostic_studies / Risk_factors_studies Limits: Humans Country/Region as subject: Asia Language: En Journal: J Clin Microbiol Year: 2008 Document type: Article Affiliation country: United kingdom

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