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Automated tumor volumetry using computer-aided image segmentation.
Gaonkar, Bilwaj; Macyszyn, Luke; Bilello, Michel; Sadaghiani, Mohammed Salehi; Akbari, Hamed; Atthiah, Mark A; Ali, Zarina S; Da, Xiao; Zhan, Yiqang; O'Rourke, Donald; Grady, Sean M; Davatzikos, Christos.
Affiliation
  • Gaonkar B; Department of Radiology, University of Pennsylvania, 3600 Market St, Suite 380, Philadelphia, Pennsylvania, 19104 (B.G., M.B., M.S.S., H.A., X.D., C.D.); Center for Biomedical Image Computing and Analytics (B.G., L.M., M.B., H.A., X.D., C.D.) and Department of Neurosurgery (L.M., M.A.A., Z.S.A., D.O
  • Macyszyn L; Department of Radiology, University of Pennsylvania, 3600 Market St, Suite 380, Philadelphia, Pennsylvania, 19104 (B.G., M.B., M.S.S., H.A., X.D., C.D.); Center for Biomedical Image Computing and Analytics (B.G., L.M., M.B., H.A., X.D., C.D.) and Department of Neurosurgery (L.M., M.A.A., Z.S.A., D.O
  • Bilello M; Department of Radiology, University of Pennsylvania, 3600 Market St, Suite 380, Philadelphia, Pennsylvania, 19104 (B.G., M.B., M.S.S., H.A., X.D., C.D.); Center for Biomedical Image Computing and Analytics (B.G., L.M., M.B., H.A., X.D., C.D.) and Department of Neurosurgery (L.M., M.A.A., Z.S.A., D.O
  • Sadaghiani MS; Department of Radiology, University of Pennsylvania, 3600 Market St, Suite 380, Philadelphia, Pennsylvania, 19104 (B.G., M.B., M.S.S., H.A., X.D., C.D.); Center for Biomedical Image Computing and Analytics (B.G., L.M., M.B., H.A., X.D., C.D.) and Department of Neurosurgery (L.M., M.A.A., Z.S.A., D.O
  • Akbari H; Department of Radiology, University of Pennsylvania, 3600 Market St, Suite 380, Philadelphia, Pennsylvania, 19104 (B.G., M.B., M.S.S., H.A., X.D., C.D.); Center for Biomedical Image Computing and Analytics (B.G., L.M., M.B., H.A., X.D., C.D.) and Department of Neurosurgery (L.M., M.A.A., Z.S.A., D.O
  • Atthiah MA; Department of Radiology, University of Pennsylvania, 3600 Market St, Suite 380, Philadelphia, Pennsylvania, 19104 (B.G., M.B., M.S.S., H.A., X.D., C.D.); Center for Biomedical Image Computing and Analytics (B.G., L.M., M.B., H.A., X.D., C.D.) and Department of Neurosurgery (L.M., M.A.A., Z.S.A., D.O
  • Ali ZS; Department of Radiology, University of Pennsylvania, 3600 Market St, Suite 380, Philadelphia, Pennsylvania, 19104 (B.G., M.B., M.S.S., H.A., X.D., C.D.); Center for Biomedical Image Computing and Analytics (B.G., L.M., M.B., H.A., X.D., C.D.) and Department of Neurosurgery (L.M., M.A.A., Z.S.A., D.O
  • Da X; Department of Radiology, University of Pennsylvania, 3600 Market St, Suite 380, Philadelphia, Pennsylvania, 19104 (B.G., M.B., M.S.S., H.A., X.D., C.D.); Center for Biomedical Image Computing and Analytics (B.G., L.M., M.B., H.A., X.D., C.D.) and Department of Neurosurgery (L.M., M.A.A., Z.S.A., D.O
  • Zhan Y; Department of Radiology, University of Pennsylvania, 3600 Market St, Suite 380, Philadelphia, Pennsylvania, 19104 (B.G., M.B., M.S.S., H.A., X.D., C.D.); Center for Biomedical Image Computing and Analytics (B.G., L.M., M.B., H.A., X.D., C.D.) and Department of Neurosurgery (L.M., M.A.A., Z.S.A., D.O
  • O'Rourke D; Department of Radiology, University of Pennsylvania, 3600 Market St, Suite 380, Philadelphia, Pennsylvania, 19104 (B.G., M.B., M.S.S., H.A., X.D., C.D.); Center for Biomedical Image Computing and Analytics (B.G., L.M., M.B., H.A., X.D., C.D.) and Department of Neurosurgery (L.M., M.A.A., Z.S.A., D.O
  • Grady SM; Department of Radiology, University of Pennsylvania, 3600 Market St, Suite 380, Philadelphia, Pennsylvania, 19104 (B.G., M.B., M.S.S., H.A., X.D., C.D.); Center for Biomedical Image Computing and Analytics (B.G., L.M., M.B., H.A., X.D., C.D.) and Department of Neurosurgery (L.M., M.A.A., Z.S.A., D.O
  • Davatzikos C; Department of Radiology, University of Pennsylvania, 3600 Market St, Suite 380, Philadelphia, Pennsylvania, 19104 (B.G., M.B., M.S.S., H.A., X.D., C.D.); Center for Biomedical Image Computing and Analytics (B.G., L.M., M.B., H.A., X.D., C.D.) and Department of Neurosurgery (L.M., M.A.A., Z.S.A., D.O
Acad Radiol ; 22(5): 653-661, 2015 May.
Article in En | MEDLINE | ID: mdl-25770633
RATIONALE AND OBJECTIVES: Accurate segmentation of brain tumors, and quantification of tumor volume, is important for diagnosis, monitoring, and planning therapeutic intervention. Manual segmentation is not widely used because of time constraints. Previous efforts have mainly produced methods that are tailored to a particular type of tumor or acquisition protocol and have mostly failed to produce a method that functions on different tumor types and is robust to changes in scanning parameters, resolution, and image quality, thereby limiting their clinical value. Herein, we present a semiautomatic method for tumor segmentation that is fast, accurate, and robust to a wide variation in image quality and resolution. MATERIALS AND METHODS: A semiautomatic segmentation method based on the geodesic distance transform was developed and validated by using it to segment 54 brain tumors. Glioblastomas, meningiomas, and brain metastases were segmented. Qualitative validation was based on physician ratings provided by three clinical experts. Quantitative validation was based on comparing semiautomatic and manual segmentations. RESULTS: Tumor segmentations obtained using manual and automatic methods were compared quantitatively using the Dice measure of overlap. Subjective evaluation was performed by having human experts rate the computerized segmentations on a 0-5 rating scale where 5 indicated perfect segmentation. CONCLUSIONS: The proposed method addresses a significant, unmet need in the field of neuro-oncology. Specifically, this method enables clinicians to obtain accurate and reproducible tumor volumes without the need for manual segmentation.
Subject(s)
Key words

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Brain Neoplasms / Pattern Recognition, Automated / Magnetic Resonance Imaging / Tumor Burden Type of study: Guideline / Observational_studies / Qualitative_research Limits: Humans Language: En Journal: Acad Radiol Journal subject: RADIOLOGIA Year: 2015 Document type: Article Country of publication: United States

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Brain Neoplasms / Pattern Recognition, Automated / Magnetic Resonance Imaging / Tumor Burden Type of study: Guideline / Observational_studies / Qualitative_research Limits: Humans Language: En Journal: Acad Radiol Journal subject: RADIOLOGIA Year: 2015 Document type: Article Country of publication: United States