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Spirosoma taeanense sp. nov., a radiation resistant bacterium isolated from a coastal sand dune.
Lee, Ji Hee; Jung, Jong-Hyun; Kim, Min-Kyu; Choe, Han Na; Seong, Chi Nam; Lim, Sangyong.
Affiliation
  • Lee JH; Radiation Research Division, Korea Atomic Energy Research Institute, Jeongeup, 56212, Republic of Korea.
  • Jung JH; Radiation Research Division, Korea Atomic Energy Research Institute, Jeongeup, 56212, Republic of Korea.
  • Kim MK; Department of Radiation Science and Technology, University of Science and Technology, Daejeon, 34113, Republic of Korea.
  • Choe HN; Radiation Research Division, Korea Atomic Energy Research Institute, Jeongeup, 56212, Republic of Korea.
  • Seong CN; Biological Resource Center, Korea Research Institute of Bioscience and Biotechnology, Jeongeup, 56212, Republic of Korea.
  • Lim S; Department of Biology, College of Life Science and Natural Resources, Sunchon National University, Suncheon, 57922, Republic of Korea.
Antonie Van Leeuwenhoek ; 114(2): 151-159, 2021 Feb.
Article in En | MEDLINE | ID: mdl-33449223
An aerobic, Gram-negative, non-motile, non-spore-forming, rod-shaped, and pale yellow-colored bacterial strain, designated TS118T, was isolated from a sand sample obtained from a coastal sand dune after exposure to 3 kGy of gamma radiation. Phylogenetic analysis based on 16S rRNA gene sequences revealed that the isolate was a member of the genus Spirosoma and most closely related to Spirosoma metallicum PR1014kT (95.1% similarity). The genome of strain TS118T is constituted by one chromosome (5,691,492 bp) and one plasmid (28,440 bp) and has a G + C content of 52.7%. The genome contains 4641 protein coding sequences (CDSs), 38 tRNAs, and 11 rRNAs. The predominant fatty acids of strain TS118T were C16:1 ω5c, iso-C15:0, C16:0, summed feature 3 (C16:1 ω6c and/or C16:1 ω7c), and iso-C17:0 3-OH. The major polar lipids were phosphatidylethanolamine, an unidentified amino lipid and an unidentified aminophospholipid. The main respiratory quinone was menaquinone-7 (MK-7). The novel strain showed resistance to gamma radiation with a D10 value (i.e., the dose required to reduce the bacterial population by tenfold) of 4.3 kGy. Based on the phylogenetic, physiological, and chemotaxonomic characteristics, strain TS118T represents a novel species, for which the name Spirosoma taeanense sp. nov. is proposed. The type strain is TS118T (=KCTC 72898T =JCM 34024T).
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Soil Microbiology / Sand Language: En Journal: Antonie Van Leeuwenhoek Year: 2021 Document type: Article Country of publication: Netherlands

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Soil Microbiology / Sand Language: En Journal: Antonie Van Leeuwenhoek Year: 2021 Document type: Article Country of publication: Netherlands