Your browser doesn't support javascript.
loading
Allelic frequencies distribution and forensic parameters of 23 autosomal short tandem repeats in the population of the State of Pernambuco, Brazil.
Sampaio, Bruno; Dos Santos Silva, Abigail Marcelino; de Sá Paiva Leitão Júnior, Sérgio; de Souza Liberal, Anna Theresa; da Cruz, Heidi Lacerda Alves; de Queiroz Balbino, Valdir.
Affiliation
  • Sampaio B; Laboratory of Bioinformatics and Evolutionary Biology, Department of Genetics, Federal University of Pernambuco, Recife, Pernambuco (PE), Brazil. Electronic address: bruno.sampaio@ufpe.br.
  • Dos Santos Silva AM; Laboratory of Bioinformatics and Evolutionary Biology, Department of Genetics, Federal University of Pernambuco, Recife, Pernambuco (PE), Brazil.
  • de Sá Paiva Leitão Júnior S; Laboratory of Bioinformatics and Evolutionary Biology, Department of Genetics, Federal University of Pernambuco, Recife, Pernambuco (PE), Brazil.
  • de Souza Liberal AT; Laboratory of Bioinformatics and Evolutionary Biology, Department of Genetics, Federal University of Pernambuco, Recife, Pernambuco (PE), Brazil.
  • da Cruz HLA; Laboratory of Bioinformatics and Evolutionary Biology, Department of Genetics, Federal University of Pernambuco, Recife, Pernambuco (PE), Brazil.
  • de Queiroz Balbino V; Laboratory of Bioinformatics and Evolutionary Biology, Department of Genetics, Federal University of Pernambuco, Recife, Pernambuco (PE), Brazil.
Leg Med (Tokyo) ; 59: 102112, 2022 Nov.
Article in En | MEDLINE | ID: mdl-35839577
Located in the Northeast Region, the Pernambuco State is one of the 27 federative units of Brazil. Here, we determined populational data for 23 short tandem repeat (STR) markers - CSF1PO, FGA, TH01, TPOX, vWA, D1S1656, D2S1338, D2S441, D3S1358, D5S818, D7S820, D8S1179, D10S1248, D12S391, D13S317, D16S539, D18S51, D19S433, D21S11, D22S1045, PENTA D, PENTA E and SE33 - of the Pernambuco population. The sample consisted of 767 healthy, adult, unrelated individuals (437 males, 330 females) born and resident in the State of Pernambuco. STRs were amplified using three multiplex kits, according to the availability: PowerPlex® Fusion 6C System (Promega Corporation), PowerPlex® Fusion System (Promega Corporation) and GlobalFiler™ Express (Thermo Fisher Scientific). Allelic frequencies, forensic parameters and Hardy-Weinberg equilibrium determinations were estimated for all the 23 loci. No deviations from the Hardy-Weinberg equilibrium were observed for any of the markers, after Bonferroni correction. We observed that the most and less informative markers were SE33 and TPOX, respectively. The combined power of discrimination (CPD) was 0.99999999999999999999999999999, and the combined power of exclusion (CPE) was 0.99999999997. The cumulative typical paternity index was 37,919,301,869.3021. Interpopulation analyses (Nei's genetic distance) based on the expanded CODIS core loci was performed between the Pernambuco sample and other global populations. Pernambuco was the closest Brazilian population to African group and stayed distant from the Native American group. This work contributed to show that a panel of 23 autosomal STR loci is very informative, being able for forensic applications related in this population.
Subject(s)
Key words

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: DNA Fingerprinting / Genetics, Population Limits: Female / Humans / Male Country/Region as subject: America do sul / Brasil Language: En Journal: Leg Med (Tokyo) Journal subject: JURISPRUDENCIA Year: 2022 Document type: Article Country of publication: Ireland

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: DNA Fingerprinting / Genetics, Population Limits: Female / Humans / Male Country/Region as subject: America do sul / Brasil Language: En Journal: Leg Med (Tokyo) Journal subject: JURISPRUDENCIA Year: 2022 Document type: Article Country of publication: Ireland