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Comparing Amyloid Imaging Normalization Strategies for Alzheimer's Disease Classification using an Automated Machine Learning Pipeline.
Tong, Boning; Risacher, Shannon L; Bao, Jingxuan; Feng, Yanbo; Wang, Xinkai; Ritchie, Marylyn D; Moore, Jason H; Urbanowicz, Ryan; Saykin, Andrew J; Shen, Li.
Affiliation
  • Tong B; University of Pennsylvania, Philadelphia, PA.
  • Risacher SL; Indiana University, Indianapolis, IN.
  • Bao J; University of Pennsylvania, Philadelphia, PA.
  • Feng Y; University of Pennsylvania, Philadelphia, PA.
  • Wang X; University of Pennsylvania, Philadelphia, PA.
  • Ritchie MD; University of Pennsylvania, Philadelphia, PA.
  • Moore JH; Cedars-Sinai Medical Center, West Hollywood, CA.
  • Urbanowicz R; Cedars-Sinai Medical Center, West Hollywood, CA.
  • Saykin AJ; Indiana University, Indianapolis, IN.
  • Shen L; University of Pennsylvania, Philadelphia, PA.
AMIA Jt Summits Transl Sci Proc ; 2023: 525-533, 2023.
Article in En | MEDLINE | ID: mdl-37350880
Amyloid imaging has been widely used in Alzheimer's disease (AD) diagnosis and biomarker discovery through detecting the regional amyloid plaque density. It is essential to be normalized by a reference region to reduce noise and artifacts. To explore an optimal normalization strategy, we employ an automated machine learning (AutoML) pipeline, STREAMLINE, to conduct the AD diagnosis binary classification and perform permutation-based feature importance analysis with thirteen machine learning models. In this work, we perform a comparative study to evaluate the prediction performance and biomarker discovery capability of three amyloid imaging measures, including one original measure and two normalized measures using two reference regions (i.e., the whole cerebellum and the composite reference region). Our AutoML results indicate that the composite reference region normalization dataset yields a higher balanced accuracy, and identifies more AD-related regions based on the fractioned feature importance ranking.

Full text: 1 Collection: 01-internacional Database: MEDLINE Type of study: Prognostic_studies Language: En Journal: AMIA Jt Summits Transl Sci Proc Year: 2023 Document type: Article Country of publication: United States

Full text: 1 Collection: 01-internacional Database: MEDLINE Type of study: Prognostic_studies Language: En Journal: AMIA Jt Summits Transl Sci Proc Year: 2023 Document type: Article Country of publication: United States