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A minimalistic approach to classifying Alzheimer's disease using simple and extremely small convolutional neural networks.
Grødem, Edvard O S; Leonardsen, Esten; MacIntosh, Bradley J; Bjørnerud, Atle; Schellhorn, Till; Sørensen, Øystein; Amlien, Inge; Fjell, Anders M.
Affiliation
  • Grødem EOS; Computational Radiology & Artificial Intelligence unit, Division of Radiology and Nuclear Medicine, Oslo University Hospital, 0372, Oslo, Norway; Center for Lifespan Changes in Brain and Cognition, Department of Psychology, University of Oslo, 0373, Oslo, Norway. Electronic address: edvardgr@uio
  • Leonardsen E; Center for Lifespan Changes in Brain and Cognition, Department of Psychology, University of Oslo, 0373, Oslo, Norway; Norwegian Centre for Mental Disorders Research, Oslo University Hospital & Institute of Clinical Medicine, University of Oslo, 0373, Oslo, Norway.
  • MacIntosh BJ; Computational Radiology & Artificial Intelligence unit, Division of Radiology and Nuclear Medicine, Oslo University Hospital, 0372, Oslo, Norway; Department of Medical Biophysics, Sunnybrook Research Institute, University of Toronto, M5G 1L7, Toronto, Canada.
  • Bjørnerud A; Computational Radiology & Artificial Intelligence unit, Division of Radiology and Nuclear Medicine, Oslo University Hospital, 0372, Oslo, Norway.
  • Schellhorn T; Computational Radiology & Artificial Intelligence unit, Division of Radiology and Nuclear Medicine, Oslo University Hospital, 0372, Oslo, Norway.
  • Sørensen Ø; Center for Lifespan Changes in Brain and Cognition, Department of Psychology, University of Oslo, 0373, Oslo, Norway.
  • Amlien I; Center for Lifespan Changes in Brain and Cognition, Department of Psychology, University of Oslo, 0373, Oslo, Norway.
  • Fjell AM; Center for Lifespan Changes in Brain and Cognition, Department of Psychology, University of Oslo, 0373, Oslo, Norway.
J Neurosci Methods ; 411: 110253, 2024 Nov.
Article in En | MEDLINE | ID: mdl-39168252
ABSTRACT

BACKGROUND:

There is a broad interest in deploying deep learning-based classification algorithms to identify individuals with Alzheimer's disease (AD) from healthy controls (HC) based on neuroimaging data, such as T1-weighted Magnetic Resonance Imaging (MRI). The goal of the current study is to investigate whether modern, flexible architectures such as EfficientNet provide any performance boost over more standard architectures.

METHODS:

MRI data was sourced from the Alzheimer's Disease Neuroimaging Initiative (ADNI) and processed with a minimal preprocessing pipeline. Among the various architectures tested, the minimal 3D convolutional neural network SFCN stood out, composed solely of 3x3x3 convolution, batch normalization, ReLU, and max-pooling. We also examined the influence of scale on performance, testing SFCN versions with trainable parameters ranging from 720 up to 2.9 million.

RESULTS:

SFCN achieves a test ROC AUC of 96.0% while EfficientNet got an ROC AUC of 94.9 %. SFCN retained high performance down to 720 trainable parameters, achieving an ROC AUC of 91.4%. COMPARISON WITH EXISTING

METHODS:

The SFCN is compared to DenseNet and EfficientNet as well as the results of other publications in the field.

CONCLUSIONS:

The results indicate that using the minimal 3D convolutional neural network SFCN with a minimal preprocessing pipeline can achieve competitive performance in AD classification, challenging the necessity of employing more complex architectures with a larger number of parameters. This finding supports the efficiency of simpler deep learning models for neuroimaging-based AD diagnosis, potentially aiding in better understanding and diagnosing Alzheimer's disease.
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Magnetic Resonance Imaging / Neural Networks, Computer / Alzheimer Disease / Neuroimaging Limits: Aged / Aged80 / Female / Humans / Male Language: En Journal: J Neurosci Methods Year: 2024 Document type: Article Country of publication: Netherlands

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Magnetic Resonance Imaging / Neural Networks, Computer / Alzheimer Disease / Neuroimaging Limits: Aged / Aged80 / Female / Humans / Male Language: En Journal: J Neurosci Methods Year: 2024 Document type: Article Country of publication: Netherlands