Your browser doesn't support javascript.
loading
Identification of potential treatments for COVID-19 through artificial intelligence-enabled phenomic analysis of human cells infected with SARS-CoV-2
Katie Heiser; Peter F. McLean; Chadwick T. Davis; Ben Fogelson; Hannah B. Gordon; Pamela Jacobson; Brett L. Hurst; Ben J. Miller; Ronald W. Alfa; Berton A. Earnshaw; Mason L. Victors; Yolanda T. Chong; Imran S. Haque; Adeline S. Low; Christopher C Gibson.
Affiliation
  • Katie Heiser; Recursion
  • Peter F. McLean; Recursion
  • Chadwick T. Davis; Recursion
  • Ben Fogelson; Recursion
  • Hannah B. Gordon; Recursion
  • Pamela Jacobson; Recursion
  • Brett L. Hurst; Utah State University
  • Ben J. Miller; Recursion
  • Ronald W. Alfa; Recursion
  • Berton A. Earnshaw; Recursion
  • Mason L. Victors; Recursion
  • Yolanda T. Chong; Recursion
  • Imran S. Haque; Recursion
  • Adeline S. Low; Recursion
  • Christopher C Gibson; Recursion
Preprint in English | bioRxiv | ID: ppbiorxiv-054387
ABSTRACT
To identify potential therapeutic stop-gaps for SARS-CoV-2, we evaluated a library of 1,670 approved and reference compounds in an unbiased, cellular image-based screen for their ability to suppress the broad impacts of the SARS-CoV-2 virus on phenomic profiles of human renal cortical epithelial cells using deep learning. In our assay, remdesivir is the only antiviral tested with strong efficacy, neither chloroquine nor hydroxychloroquine have any beneficial effect in this human cell model, and a small number of compounds not currently being pursued clinically for SARS-CoV-2 have efficacy. We observed weak but beneficial class effects of {beta}-blockers, mTOR/PI3K inhibitors and Vitamin D analogues and a mild amplification of the viral phenotype with {beta}-agonists.
License
cc_by_nc
Full text: Available Collection: Preprints Database: bioRxiv Type of study: Experimental_studies / Prognostic study Language: English Year: 2020 Document type: Preprint
Full text: Available Collection: Preprints Database: bioRxiv Type of study: Experimental_studies / Prognostic study Language: English Year: 2020 Document type: Preprint
...