Your browser doesn't support javascript.
loading
Identification of SARS-CoV-2 induced pathways reveal drug repurposing strategies
Namshik Han; Woochang Hwang; Kostas Tzelepis; Patrick Schmerer; Eliza Yankova; Meabh MacMahon; Winnie Lei; Nicholas M Katritsis; Anika Liu; Alison Schuldt; Rebecca Harris; Kathryn Chapman; Frank McCaughan; Friedemann Weber; Tony Kouzarides.
Affiliation
  • Namshik Han; University of Cambridge
  • Woochang Hwang; University of Cambridge
  • Kostas Tzelepis; University of Cambridge
  • Patrick Schmerer; Justus-Liebig University
  • Eliza Yankova; University of Cambridge
  • Meabh MacMahon; University of Cambridge
  • Winnie Lei; University of Cambridge
  • Nicholas M Katritsis; University of Cambridge
  • Anika Liu; University of Cambridge
  • Alison Schuldt; University of Cambridge
  • Rebecca Harris; University of Cambridge
  • Kathryn Chapman; University of Cambridge
  • Frank McCaughan; University of Cambridge
  • Friedemann Weber; Justus-Liebig University
  • Tony Kouzarides; Wellcome Trust/Cancer Research UK Gurdon Institute
Preprint in English | bioRxiv | ID: ppbiorxiv-265496
Journal article
A scientific journal published article is available and is probably based on this preprint. It has been identified through a machine matching algorithm, human confirmation is still pending.
See journal article
ABSTRACT
The global outbreak of SARS-CoV-2 necessitates the rapid development of new therapies against COVID-19 infection. Here, we present the identification of 200 approved drugs, appropriate for repurposing against COVID-19. We constructed a SARS-CoV-2-induced protein (SIP) network, based on disease signatures defined by COVID-19 multi-omic datasets(Bojkova et al., 2020; Gordon et al., 2020), and cross-examined these pathways against approved drugs. This analysis identified 200 drugs predicted to target SARS-CoV-2-induced pathways, 40 of which are already in COVID-19 clinical trials(Clinicaltrials.gov, 2020) testifying to the validity of the approach. Using artificial neural network analysis we classified these 200 drugs into 9 distinct pathways, within two overarching mechanisms of action (MoAs) viral replication (130) and immune response (70). A subset of drugs implicated in viral replication were tested in cellular assays and two (proguanil and sulfasalazine) were shown to inhibit replication. This unbiased and validated analysis opens new avenues for the rapid repurposing of approved drugs into clinical trials.
License
cc_by_nc_nd
Full text: Available Collection: Preprints Database: bioRxiv Type of study: Prognostic study / Rct Language: English Year: 2020 Document type: Preprint
Full text: Available Collection: Preprints Database: bioRxiv Type of study: Prognostic study / Rct Language: English Year: 2020 Document type: Preprint
...