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Membrane fusion and immune evasion by the spike protein of SARS-CoV-2 Delta variant
Christy L. Lavine; Haisun Zhu; Krishna Anand; Pei Tong; Avneesh Gautam; Megan L. Mayer; Richard M. Walsh Jr.; Wei Yang; Michael S. Seaman; Jianming Lu.
Affiliation
  • Christy L. Lavine; Beth Israel Deaconess Medical Center
  • Haisun Zhu; Institute for Protein Innovation/Harvard Institutes of Medicine
  • Krishna Anand; Institute for Protein Innovation/Harvard Institutes of Medicine
  • Pei Tong; Brigham and Womens Hospital
  • Avneesh Gautam; Brigham and Womens Hospital
  • Megan L. Mayer; The Harvard Cryo-EM Center for Structural Biology/Harvard Medical School
  • Richard M. Walsh Jr.; The Harvard Cryo-EM Center for Structural Biology/Harvard Medical School
  • Wei Yang; Institute for Protein Innovation/Harvard Institutes of Medicine
  • Michael S. Seaman; Beth Israel Deaconess Medical Center/Harvard Medical School
  • Jianming Lu; Codex BioSolutions, Inc.
Preprint in English | bioRxiv | ID: ppbiorxiv-456689
ABSTRACT
The Delta variant of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has outcompeted previously prevalent variants and become a dominant strain worldwide. We report here structure, function and antigenicity of its full-length spike (S) trimer in comparison with those of other variants, including Gamma, Kappa, and previously characterized Alpha and Beta. Delta S can fuse membranes more efficiently at low levels of cellular receptor ACE2 and its pseudotyped viruses infect target cells substantially faster than all other variants tested, possibly accounting for its heightened transmissibility. Mutations of each variant rearrange the antigenic surface of the N-terminal domain of the S protein in a unique way, but only cause local changes in the receptor-binding domain, consistent with greater resistance particular to neutralizing antibodies. These results advance our molecular understanding of distinct properties of these viruses and may guide intervention strategies.
License
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Full text: Available Collection: Preprints Database: bioRxiv Language: English Year: 2021 Document type: Preprint
Full text: Available Collection: Preprints Database: bioRxiv Language: English Year: 2021 Document type: Preprint
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