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Isolation of bat sarbecoviruses of SARS-CoV-2 clade, Japan
Shin Murakami; Tomoya Kitamura; Hiromichi Matsugo; Haruhiko Kamiki; Ken Oyabu; Wataru Sekine; Akiko Takenaka-Uema; Yuko Sakai-Tagawa; Yoshihiro Kawaoka; Taisuke Horimoto.
Affiliation
  • Shin Murakami; University of Tokyo: Tokyo Daigaku
  • Tomoya Kitamura; National Agriculture and Food Research Organization (NARO)
  • Hiromichi Matsugo; University of Tokyo
  • Haruhiko Kamiki; University of Tokyo
  • Ken Oyabu; Isumi County-City Nature Preservation Association
  • Wataru Sekine; University of Tokyo: Tokyo Daigaku
  • Akiko Takenaka-Uema; The University of Tokyo: Tokyo Daigaku
  • Yuko Sakai-Tagawa; Institute of Medical Science, The University of Tokyo
  • Yoshihiro Kawaoka; Institute of Medical Science, The University of Tokyo
  • Taisuke Horimoto; University of Tokyo
Preprint in En | PREPRINT-BIORXIV | ID: ppbiorxiv-492045
ABSTRACT
Betacoronaviruses have caused 3 outbreaks in the past 2 decades. SARS-CoV-2, in particular, has caused a serious pandemic. As the betacoronaviruses are considered to originate from bats, surveillance of bat betacoronaviruses is crucial for understanding the mechanism of cross-species transition and potential for future outbreaks. We previously detected and characterized a SARS-CoV-2-related sarbecovirus, Rc-o319, from Rhinolophus cornutus in Japan. Here, we detected several bat sarbecoviruses of the SARS-CoV-2 clade from R. cornutus in multiple locations in Japan, and successfully isolated them using Vero/TMPRSS2 cells stably expressing R. cornutus ACE2 (Vero-RcACE2). The coding sequences of S1 region varied among isolates, whereas other genetic regions were highly conserved. Isolates were efficiently grown in Vero-RcACE2 cells, but did not replicate in Vero/TMPRSS2 cells stably expressing human ACE2, suggesting a narrow host range. Further long-term epidemiological studies of sarbecoviruses in wildlife are expected to facilitate the assessment of the risk of their spillover potential.
License
cc_by_nc_nd
Full text: 1 Collection: 09-preprints Database: PREPRINT-BIORXIV Type of study: Observational_studies / Prognostic_studies / Rct Language: En Year: 2022 Document type: Preprint
Full text: 1 Collection: 09-preprints Database: PREPRINT-BIORXIV Type of study: Observational_studies / Prognostic_studies / Rct Language: En Year: 2022 Document type: Preprint