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Plasma gradient of soluble urokinase-type plasminogen activator receptor is linked to pathogenic plasma proteome and immune transcriptome and stratifies outcomes in severe COVID-19
Jafar Sarif; Deblina Raychaudhuri; Ranit D'Rozario; Purbita Bandopadhyay; Praveen Singh; Priyanka Mehta; Md. Asmaul Hoque; Bishnu Prasad Sinha; Manoj Kushwaha; Shweta Sahni; Priti Devi; Partha Chattopadhyay; Shekhar Ranjan Paul; Yogiraj Ray; Kausik Chaudhuri; Sayantan Banerjee; Debajyoti Majumdar; Bibhuti Saha; Biswanath Sharma Sarkar; Prasun Bhattacharya; Shilpak Chatterjee; Sandip Paul; Pramit Ghosh; Rajesh Pandey; Shantanu Sengupta; Dipyaman Ganguly.
Affiliation
  • Jafar Sarif; IICB-Translational Research Unit of Excellence, CSIR-Indian Institute of Chemical Biology, Kolkata, India
  • Deblina Raychaudhuri; IICB-Translational Research Unit of Excellence, CSIR-Indian Institute of Chemical Biology, Kolkata, India
  • Ranit D'Rozario; IICB-Translational Research Unit of Excellence, CSIR-Indian Institute of Chemical Biology, Kolkata, India
  • Purbita Bandopadhyay; IICB-Translational Research Unit of Excellence, CSIR-Indian Institute of Chemical Biology, Kolkata, India
  • Praveen Singh; Cardiorespiratory Disease Biology, CSIR-Institute of Genomics and Integrative Biology, New Delhi, India
  • Priyanka Mehta; INtegrative GENomics of HOst-PathogEn (INGEN-HOPE) laboratory, CSIR-Institute of Genomics and Integrative Biology, New Delhi, India
  • Md. Asmaul Hoque; IICB-Translational Research Unit of Excellence, CSIR-Indian Institute of Chemical Biology, Kolkata, India
  • Bishnu Prasad Sinha; IICB-Translational Research Unit of Excellence, CSIR-Indian Institute of Chemical Biology, Kolkata, India
  • Manoj Kushwaha; Cardiorespiratory Disease Biology, CSIR-Institute of Genomics and Integrative Biology, New Delhi, India
  • Shweta Sahni; INtegrative GENomics of HOst-PathogEn (INGEN-HOPE) laboratory, CSIR-Institute of Genomics and Integrative Biology, New Delhi, India
  • Priti Devi; INtegrative GENomics of HOst-PathogEn (INGEN-HOPE) laboratory, CSIR-Institute of Genomics and Integrative Biology, New Delhi, India
  • Partha Chattopadhyay; INtegrative GENomics of HOst-PathogEn (INGEN-HOPE) laboratory, CSIR-Institute of Genomics and Integrative Biology, New Delhi, India
  • Shekhar Ranjan Paul; Department of Medicine, ID & BG Hospital, Kolkata, India
  • Yogiraj Ray; Department of Medicine, ID & BG Hospital, Kolkata, India
  • Kausik Chaudhuri; Department of Medicine, ID & BG Hospital, Kolkata, India
  • Sayantan Banerjee; Department of Medicine, ID & BG Hospital, Kolkata, India
  • Debajyoti Majumdar; Department of Medicine, ID & BG Hospital, Kolkata, India
  • Bibhuti Saha; School of Tropical Medicine, Kolkata, India
  • Biswanath Sharma Sarkar; Department of Medicine, ID & BG Hospital, Kolkata, India
  • Prasun Bhattacharya; Medical College, Kolkata, India
  • Shilpak Chatterjee; IICB-Translational Research Unit of Excellence, CSIR-Indian Institute of Chemical Biology, Kolkata, India
  • Sandip Paul; IICB-Translational Research Unit of Excellence, CSIR-Indian Institute of Chemical Biology, Kolkata, India
  • Pramit Ghosh; Deben Mahata Government Medical College & Hospital. Purulia, India
  • Rajesh Pandey; INtegrative GENomics of HOst-PathogEn (INGEN-HOPE) laboratory, CSIR-Institute of Genomics and Integrative Biology, New Delhi, India
  • Shantanu Sengupta; Cardiorespiratory Disease Biology, CSIR-Institute of Genomics and Integrative Biology, New Delhi, India
  • Dipyaman Ganguly; IICB-Translational Research Unit of Excellence, CSIR-Indian Institute of Chemical Biology, Kolkata, India
Preprint in English | medRxiv | ID: ppmedrxiv-21259125
Journal article
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ABSTRACT
Disease caused by SARS-CoV-2 coronavirus (COVID-19) has resulted in significant morbidity and mortality world-wide. A systemic hyper-inflammation characterizes the severe COVID-19 disease often associated with acute respiratory distress syndrome (ARDS). Blood biomarkers capable of risk stratification are of great importance in effective triage and critical care of severe COVID-19 patients. In the present study we report higher plasma abundance of soluble urokinase-type plasminogen activator receptor (sUPAR), expressed by an abnormally expanded circulating myeloid cell population, in severe COVID-19 patients with ARDS. Plasma sUPAR level was found to be linked to a characteristic proteomic signature of plasma, linked to coagulation disorders and complement activation. Receiver operator characteristics curve analysis identified a cut-off value of sUPAR at 1996.809 pg/ml that could predict survival in our cohort (Odds ratio 2.9286, 95% confidence interval 1.0427-8.2257). Lower sUPAR level than this threshold concentration was associated with a differential expression of the immune transcriptome as well as favourable clinical outcomes, both in terms of survival benefit (Hazard ratio 0.3615, 95% confidence interval 0.1433-0.912) and faster disease remission in our patient cohort. Thus we identified sUPAR as a key pathogenic circulating molecule linking systemic hyperinflammation to the hypercoagulable state and stratifying clinical outcomes in severe COVID-19 patients with ARDS.
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Full text: Available Collection: Preprints Database: medRxiv Type of study: Cohort_studies / Observational study / Prognostic study Language: English Year: 2021 Document type: Preprint
Full text: Available Collection: Preprints Database: medRxiv Type of study: Cohort_studies / Observational study / Prognostic study Language: English Year: 2021 Document type: Preprint
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