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A MUC5B gene polymorphism, rs35705950-T, confers protective effects in COVID-19 infection
Anurag Verma; Jessica Minnier; Jennifer E Huffman; Emily S Wan; Lina Gao; Jacob Joseph; Yuk-Lam Ho; Wen-Chih Wu; Kelly Cho; Bryan R Gorman; Nallakkandi Rajeevan; Saiju Pyarajan; Helene Garcon; James B Meigs; Yan V Sun; Peter D Reaven; John E McGeary; Ayako Suzuki; Joel Gelernter; Julie A Lynch; Jeffrey M Petersen; Seyedeh Maryam Zekavat; Pradeep Natarajan; Cecelia J Madison; Sharvari Dalal; Darshana N Jhala; Mehrdad Arjomandi; Elise Gatsby; Kristine E Lynch; Robert A Bonomo; Mat Freiberg; Gita A Pathak; Jin J Zhou; Curtis J Donskey; Ravi K Madduri; Quinn S Wells; Rose DL Huang; Renato Polimanti; Kyong-Mi Chang; Katherine P Liao; Philip S Tsao; Peter W.F. Wilson; Christopher J O'Donnell; John M Gaziano; Richard L Hauger; Sudha K. Iyengar; Shiuh-Wen Luoh.
Affiliation
  • Anurag Verma; Corporal Michael Crescenz VA Medical Center
  • Jessica Minnier; Oregon Health & Science University
  • Jennifer E Huffman; VA Boston Healthcare System
  • Emily S Wan; VA Boston Healthcare System
  • Lina Gao; Oregon Health & Science University
  • Jacob Joseph; VA Boston Healthcare System
  • Yuk-Lam Ho; VA Boston Healthcare System
  • Wen-Chih Wu; Providence VA Healthcare System
  • Kelly Cho; VA Boston Healthcare System
  • Bryan R Gorman; VA Boston Healthcare System
  • Nallakkandi Rajeevan; Yale School of Medicine
  • Saiju Pyarajan; VA Boston Healthcare System
  • Helene Garcon; VA Boston Healthcare System
  • James B Meigs; Massachusetts General Hospital
  • Yan V Sun; Emory University School of Public Health
  • Peter D Reaven; Phoenix VA Healthcare System
  • John E McGeary; Providence VA Medical Center
  • Ayako Suzuki; Durham VA Medical Center
  • Joel Gelernter; Yale Univ. School of Medicine
  • Julie A Lynch; VA Salt Lake City Health Care System
  • Jeffrey M Petersen; Corporal Michael Crescenz VA Medical Center
  • Seyedeh Maryam Zekavat; Yale School of Medicine
  • Pradeep Natarajan; Massachusetts General Hospital
  • Cecelia J Madison; Portland VA Medical Center
  • Sharvari Dalal; Corporal Michael J Crescenz VA Medical Center
  • Darshana N Jhala; Corporal Michael Crescenz VA Medical Center, Philadelphia, PA
  • Mehrdad Arjomandi; San Francisco VA Healthcare System; University of California San Francisco
  • Elise Gatsby; VA Informatics and Computing Infrastructure (VINCI), VA Salt Lake City Healthcare System
  • Kristine E Lynch; VA Informatics and Computing Infrastructure (VINCI), VA Salt Lake City Healthcare System
  • Robert A Bonomo; Case Western Reserve University
  • Mat Freiberg; Vanderbilt University Medical Center
  • Gita A Pathak; Yale School of Medicine
  • Jin J Zhou; University of California, Los Angeles
  • Curtis J Donskey; Louis Stokes Cleveland VA and Case Western Reserve University
  • Ravi K Madduri; Argonne National Laboratory
  • Quinn S Wells; Vanderbilt University Medical Center
  • Rose DL Huang; VA Boston Healthcare System
  • Renato Polimanti; Yale School of Medicine
  • Kyong-Mi Chang; Corporal Michael J Crescenz VA Medical Center
  • Katherine P Liao; VA Boston Healthcare System
  • Philip S Tsao; VA Palo Alto Health Care System
  • Peter W.F. Wilson; Atlanta VA Health Care System
  • Christopher J O'Donnell; VA Boston Healthcare System
  • John M Gaziano; VA Boston Healthcare System
  • Richard L Hauger; VA San Diego Healthcare System
  • Sudha K. Iyengar; Case Western Reserve University
  • Shiuh-Wen Luoh; VA Portland Health Care System
Preprint in English | medRxiv | ID: ppmedrxiv-21263911
ABSTRACT
RationaleA common MUC5B gene polymorphism, rs35705950-T, is associated with idiopathic pulmonary fibrosis, but its role in the SARS-CoV-2 infection and disease severity is unclear. ObjectivesTo assess whether rs35705950-T confers differential risk for clinical outcomes associated with COVID-19 infection among participants in the Million Veteran Program (MVP) and COVID-19 Host Genetics Initiative (HGI). MethodsMVP participants were examined for an association between the incidence or severity of COVID-19 and the presence of a MUC5B rs35705950-T allele. Comorbidities and clinical events were extracted from the electronic health records (EHR). The analysis was performed within each ancestry group in the MVP, adjusting for sex, age, age2, and first twenty principal components followed by a trans-ethnic meta-analysis. We then pursued replication and performed a meta-analysis with the trans-ethnic summary statistics from the HGI. A phenome-wide association study (PheWAS) of the rs35705950-T was conducted to explore associated pathophysiologic conditions. Measurements and Main ResultsA COVID-19 severity scale was modified from the World Health Organization criteria, and phenotypes derived from the International Classification of Disease-9/10 were extracted from EHR. Presence of rs35705950-T was associated with fewer hospitalizations (Ncases=25353, Ncontrols=631,024; OR=0.86 [0.80-0.93], p=7.4 x 10-5) in trans-ethnic meta-analysis within MVP and joint meta-analyses with the HGI (N=1641311; OR=0.89 [0.85-0.93], p =1.9 x 10-6). Moreover, individuals of European Ancestry with at least one copy of rs35705950-T had fewer post-COVID-19 pneumonia events (OR=0.85 [0.76-0.96], p =0.008). PheWAS exclusively revealed pulmonary involvement. ConclusionsThe MUC5B variant rs35705950-T is protective in COVID-19 infection.
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Full text: Available Collection: Preprints Database: medRxiv Type of study: Experimental_studies / Observational study / Prognostic study / Review Language: English Year: 2021 Document type: Preprint
Full text: Available Collection: Preprints Database: medRxiv Type of study: Experimental_studies / Observational study / Prognostic study / Review Language: English Year: 2021 Document type: Preprint
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