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Integrated Genomic Surveillance reveals extensive onward transmission of travel-imported SARS-CoV-2 infections in the community
Torsten Houwaart; Samir Belhaj; Emran Tawalbeh; Dirk Nagels; Patrick Finzer; Lisa Stiller; Jacqueline Blum; Christian Lange; Yara Fröhlich; Assia Benmoumene; Dounia Asskali; Hussein Haidar; Janina von Dahlen; Carla Adelmann; Britta Schroer; Ute Osmers; Christiane Grice; Phillipp P. Kirfel; Hassan Jomaa; Moritz Pigulla; Pascal Kreuzer; Alona Tyshaieva; Jonas Weber; Daniel Strelow; Jessica Nicolai; Tobias Wienemann; Malte Kohns Vasconcelos; Lisanna Hülse; Katrin Hoffmann; Nadine Lübke; Sandra Hauka; Marcel Andree; Claus Jürgen Scholz; Nathalie Jazmati; Klaus Göbels; Rainer Zotz; Klaus Pfeffer; Jörg Timm; Lutz Ehlkes; Andreas Walker; Alexander T. Dilthey; - German COVID-19 OMICS Initiative (DeCOI).
Affiliation
  • Torsten Houwaart; Institute of Medical Microbiology and Hospital Hygiene, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
  • Samir Belhaj; Düsseldorf Health Authority (Gesundheitsamt Düsseldorf), Düsseldorf, Germany
  • Emran Tawalbeh; Düsseldorf Health Authority (Gesundheitsamt Düsseldorf), Düsseldorf, Germany
  • Dirk Nagels; Düsseldorf Health Authority (Gesundheitsamt Düsseldorf), Düsseldorf, Germany
  • Patrick Finzer; Institute of Medical Microbiology and Hospital Hygiene, Heinrich Heine University Düsseldorf, Düsseldorf, Germany; Zotz | Klimas, Düsseldorf, Germany
  • Lisa Stiller; Medizinische Laboratorien Düsseldorf, Düsseldorf, Germany
  • Jacqueline Blum; Medizinische Laboratorien Düsseldorf, Düsseldorf, Germany
  • Christian Lange; Medizinische Laboratorien Düsseldorf, Düsseldorf, Germany
  • Yara Fröhlich; Institute of Virology, University Hospital Düsseldorf, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
  • Assia Benmoumene; Institute of Virology, University Hospital Düsseldorf, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
  • Dounia Asskali; Institute of Virology, University Hospital Düsseldorf, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
  • Hussein Haidar; Institute of Virology, University Hospital Düsseldorf, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
  • Janina von Dahlen; Institute of Virology, University Hospital Düsseldorf, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
  • Carla Adelmann; Solingen Health Authority (Gesundheitsamt Solingen)
  • Britta Schroer; Solingen Health Authority (Gesundheitsamt Solingen)
  • Ute Osmers; MVZ SYNLAB Leverkusen GmbH
  • Christiane Grice; MVZ SYNLAB Leverkusen GmbH
  • Phillipp P. Kirfel; MVZ SYNLAB Leverkusen GmbH
  • Hassan Jomaa; MVZ SYNLAB Leverkusen GmbH
  • Moritz Pigulla; Düsseldorf Health Authority (Gesundheitsamt Düsseldorf), Düsseldorf, Germany
  • Pascal Kreuzer; Düsseldorf Health Authority (Gesundheitsamt Düsseldorf), Düsseldorf, Germany
  • Alona Tyshaieva; Institute of Medical Microbiology and Hospital Hygiene, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
  • Jonas Weber; Institute of Medical Microbiology and Hospital Hygiene, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
  • Daniel Strelow; Institute of Medical Microbiology and Hospital Hygiene, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
  • Jessica Nicolai; Institute of Medical Microbiology and Hospital Hygiene, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
  • Tobias Wienemann; Institute of Medical Microbiology and Hospital Hygiene, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
  • Malte Kohns Vasconcelos; Institute of Medical Microbiology and Hospital Hygiene, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
  • Lisanna Hülse; Institute of Medical Microbiology and Hospital Hygiene, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
  • Katrin Hoffmann; Institute of Virology, University Hospital Düsseldorf, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
  • Nadine Lübke; Institute of Virology, University Hospital Düsseldorf, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
  • Sandra Hauka; Institute of Virology, University Hospital Düsseldorf, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
  • Marcel Andree; Institute of Virology, University Hospital Düsseldorf, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
  • Claus Jürgen Scholz; Labor Dr. Wisplinghoff, Cologne, Germany
  • Nathalie Jazmati; Labor Dr. Wisplinghoff, Cologne, Germany
  • Klaus Göbels; Düsseldorf Health Authority (Gesundheitsamt Düsseldorf), Düsseldorf, Germany
  • Rainer Zotz; Zotz | Klimas, Düsseldorf, Germany; Labor Dr. Wisplinghoff, Cologne, Germany
  • Klaus Pfeffer; Institute of Medical Microbiology and Hospital Hygiene, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
  • Jörg Timm; Institute of Virology, University Hospital Düsseldorf, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
  • Lutz Ehlkes; Düsseldorf Health Authority (Gesundheitsamt Düsseldorf), Düsseldorf, Germany
  • Andreas Walker; Institute of Virology, University Hospital Düsseldorf, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
  • Alexander T. Dilthey; Institute of Medical Microbiology and Hospital Hygiene, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
  • - German COVID-19 OMICS Initiative (DeCOI);
Preprint in En | PREPRINT-MEDRXIV | ID: ppmedrxiv-21264530
ABSTRACT
Integration of genomic surveillance with contact tracing provides a powerful tool for the reconstruction of person-to-person pathogen transmission chains. We report two large clusters of SARS-CoV-2 cases ("Delta" clade, 110 cases combined) detected in July 2021 by Integrated Genomic Surveillance in Dusseldorf. Structured interviews and deep contact tracing demonstrated an association to a single SARS-CoV-2 infected return traveller (Cluster 1) and to return travel from Catalonia and other European countries (Cluster 2), highlighting the importance of containing travel-imported SARS-CoV-2 infections.
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Full text: 1 Collection: 09-preprints Database: PREPRINT-MEDRXIV Type of study: Qualitative_research Language: En Year: 2021 Document type: Preprint
Full text: 1 Collection: 09-preprints Database: PREPRINT-MEDRXIV Type of study: Qualitative_research Language: En Year: 2021 Document type: Preprint