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MEMOTE for standardized genome-scale metabolic model testing.
Lieven, Christian; Beber, Moritz E; Olivier, Brett G; Bergmann, Frank T; Ataman, Meric; Babaei, Parizad; Bartell, Jennifer A; Blank, Lars M; Chauhan, Siddharth; Correia, Kevin; Diener, Christian; Dräger, Andreas; Ebert, Birgitta E; Edirisinghe, Janaka N; Faria, José P; Feist, Adam M; Fengos, Georgios; Fleming, Ronan M T; García-Jiménez, Beatriz; Hatzimanikatis, Vassily; van Helvoirt, Wout; Henry, Christopher S; Hermjakob, Henning; Herrgård, Markus J; Kaafarani, Ali; Kim, Hyun Uk; King, Zachary; Klamt, Steffen; Klipp, Edda; Koehorst, Jasper J; König, Matthias; Lakshmanan, Meiyappan; Lee, Dong-Yup; Lee, Sang Yup; Lee, Sunjae; Lewis, Nathan E; Liu, Filipe; Ma, Hongwu; Machado, Daniel; Mahadevan, Radhakrishnan; Maia, Paulo; Mardinoglu, Adil; Medlock, Gregory L; Monk, Jonathan M; Nielsen, Jens; Nielsen, Lars Keld; Nogales, Juan; Nookaew, Intawat; Palsson, Bernhard O; Papin, Jason A.
Afiliación
  • Lieven C; Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark.
  • Beber ME; Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark.
  • Olivier BG; Systems Biology Lab, Amsterdam Institute of Molecular and Life Sciences (AIMMS), Vrije Universiteit Amsterdam, Amsterdam, the Netherlands.
  • Bergmann FT; BioQUANT/COS, Heidelberg University, Heidelberg, Germany.
  • Ataman M; Ecole Polytechnique Fédérale de Lausanne, Laboratory of Computational Systems Biotechnology, Lausanne, Switzerland.
  • Babaei P; Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark.
  • Bartell JA; Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark.
  • Blank LM; iAMB-Institute of Applied Microbiology, ABBt-Aachen Biology and Biotechnology, RWTH Aachen University, Aachen, Germany.
  • Chauhan S; Department of Bioengineering, University of California, La Jolla, CA, USA.
  • Correia K; Department of Chemical Engineering and Applied Chemistry, University of Toronto, Toronto, Ontario, Canada.
  • Diener C; Human Systems Biology Laboratory, Instituto Nacional de Medicina Genomica & Coordinación de la Investigación Científica-Red de Apoyo a la Investigación, UNAM, Mexico City, Mexico.
  • Dräger A; Institute for Systems Biology, Seattle, WA, USA.
  • Ebert BE; Computational Systems Biology of Infection and Antimicrobial-Resistant Pathogens, Institute for Biomedical Informatics (IBMI), Tübingen, Germany.
  • Edirisinghe JN; Department of Computer Science, University of Tübingen, Tübingen, Germany.
  • Faria JP; German Center for Infection Research (DZIF), partner site Tübingen, Tübingen, Germany.
  • Feist AM; iAMB-Institute of Applied Microbiology, ABBt-Aachen Biology and Biotechnology, RWTH Aachen University, Aachen, Germany.
  • Fengos G; Australian Institute for Bioengineering and Nanotechnology, The University of Queensland, Brisbane, Queensland, Australia.
  • Fleming RMT; Argonne National Laboratory, Lemont, IL, USA.
  • García-Jiménez B; Argonne National Laboratory, Lemont, IL, USA.
  • Hatzimanikatis V; Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark.
  • van Helvoirt W; Department of Bioengineering, University of California, La Jolla, CA, USA.
  • Henry CS; Ecole Polytechnique Fédérale de Lausanne, Laboratory of Computational Systems Biotechnology, Lausanne, Switzerland.
  • Hermjakob H; Analytical Biosciences, Division of Systems Biomedicine and Pharmacology, Leiden Academic Centre for Drug Research, Leiden University, Leiden, the Netherlands.
  • Herrgård MJ; Department of Systems Biology, Centro Nacional de Biotecnología, Consejo Superior de Investigaciones Científicas (CNB-CSIC), Madrid, Spain.
  • Kaafarani A; Centro de Biotecnología y Genómica de Plantas (CBGP, UPM-INIA), Universidad Politécnica de Madrid (UPM) - Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Madrid, Spain.
  • Kim HU; Ecole Polytechnique Fédérale de Lausanne, Laboratory of Computational Systems Biotechnology, Lausanne, Switzerland.
  • King Z; Department of Animal and Aquacultural Sciences, Faculty of Biosciences, Norwegian University of Life Sciences, Oslo, Norway.
  • Klamt S; Hanze University of Applied Sciences, Groningen, the Netherlands.
  • Klipp E; Argonne National Laboratory, Lemont, IL, USA.
  • Koehorst JJ; European Bioinformatics Institute, European Molecular Biology Laboratory (EMBL-EBI), Wellcome Trust Genome Campus, Cambridge, UK.
  • König M; Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark.
  • Lakshmanan M; Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark.
  • Lee DY; Department of Chemical and Biomolecular Engineering (BK21 Plus Program), BioProcess Engineering Research Center, BioInformatics Research Center, Institute for the BioCentury, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, Korea.
  • Lee SY; Department of Bioengineering, University of California, La Jolla, CA, USA.
  • Lee S; Analysis and Redesign of Biological Networks, Max Planck Institute for Dynamics of Complex Technical Systems Magdeburg, Magdeburg, Germany.
  • Lewis NE; Theoretical Biophysics, Humboldt-Universität zu Berlin, Berlin, Germany.
  • Liu F; Department of Agrotechnology and Food Sciences, Laboratory of Systems and Synthetic Biology, Wageningen University & Research, Wageningen, the Netherlands.
  • Ma H; Theoretical Biophysics, Humboldt-Universität zu Berlin, Berlin, Germany.
  • Machado D; Bioprocessing Technology Institute, Agency for Science, Technology and Research (A*STAR), Singapore, Singapore.
  • Mahadevan R; Bioprocessing Technology Institute, Agency for Science, Technology and Research (A*STAR), Singapore, Singapore.
  • Maia P; School of Chemical Engineering Sungkyunkwan University, Jangan-gu Suwon, Gyeonggi-do, Republic of Korea.
  • Mardinoglu A; Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark.
  • Medlock GL; Department of Chemical and Biomolecular Engineering (BK21 Plus Program), BioProcess Engineering Research Center, BioInformatics Research Center, Institute for the BioCentury, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, Korea.
  • Monk JM; Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, Sweden.
  • Nielsen J; Centre for Host-Microbiome Interactions, Faculty of Dentistry, Oral & Craniofacial Sciences, King's College London, London, UK.
  • Nielsen LK; Department of Bioengineering, University of California, La Jolla, CA, USA.
  • Nogales J; Department of Pediatrics and Novo Nordisk Foundation Center for Biosustainability, University of California, San Diego School of Medicine, La Jolla, CA, USA.
  • Nookaew I; Argonne National Laboratory, Lemont, IL, USA.
  • Palsson BO; Key Laboratory of Systems Microbial Biotechnology, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, P.R. China.
  • Papin JA; Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany.
Nat Biotechnol ; 38(3): 272-276, 2020 03.
Article en En | MEDLINE | ID: mdl-32123384
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Biología Computacional / Redes y Vías Metabólicas Idioma: En Revista: Nat Biotechnol Asunto de la revista: BIOTECNOLOGIA Año: 2020 Tipo del documento: Article País de afiliación: Dinamarca Pais de publicación: Estados Unidos
Texto completo
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Biología Computacional / Redes y Vías Metabólicas Idioma: En Revista: Nat Biotechnol Asunto de la revista: BIOTECNOLOGIA Año: 2020 Tipo del documento: Article País de afiliación: Dinamarca Pais de publicación: Estados Unidos