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Protein packing defects "heat up" interfacial water.
Sierra, María Belén; Accordino, Sebastián R; Rodriguez-Fris, J Ariel; Morini, Marcela A; Appignanesi, Gustavo A; Fernández Stigliano, Ariel.
Afiliação
  • Sierra MB; Sección Fisicoquímica, INQUISUR-UNS-CONICET-Departamento de Química, Universidad Nacional del Sur, Avda. Alem 1253, 8000, Bahía Blanca, Argentina. mbsierra@uns.edu.ar
Eur Phys J E Soft Matter ; 36(6): 62, 2013 Jun.
Article em En | MEDLINE | ID: mdl-23797357
Ligands must displace water molecules from their corresponding protein surface binding site during association. Thus, protein binding sites are expected to be surrounded by non-tightly-bound, easily removable water molecules. In turn, the existence of packing defects at protein binding sites has been also established. At such structural motifs, named dehydrons, the protein backbone is exposed to the solvent since the intramolecular interactions are incompletely wrapped by non-polar groups. Hence, dehydrons are sticky since they depend on additional intermolecular wrapping in order to properly protect the structure from water attack. Thus, a picture of protein binding is emerging wherein binding sites should be both dehydrons rich and surrounded by easily removable water. In this work we shall indeed confirm such a link between structure and dynamics by showing the existence of a firm correlation between the degree of underwrapping of the protein chain and the mobility of the corresponding hydration water molecules. In other words, we shall show that protein packing defects promote their local dehydration, thus producing a region of "hot" interfacial water which might be easily removed by a ligand upon association.
Assuntos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Temperatura / Água / Proteínas Idioma: En Revista: Eur Phys J E Soft Matter Assunto da revista: BIOFISICA Ano de publicação: 2013 Tipo de documento: Article País de afiliação: Argentina País de publicação: França

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Temperatura / Água / Proteínas Idioma: En Revista: Eur Phys J E Soft Matter Assunto da revista: BIOFISICA Ano de publicação: 2013 Tipo de documento: Article País de afiliação: Argentina País de publicação: França