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Multi-Objective Optimization of Microalgae Metabolism: An Evolutive Algorithm Based on FBA.
Briones-Baez, Monica Fabiola; Aguilera-Vazquez, Luciano; Rangel-Valdez, Nelson; Martinez-Salazar, Ana Lidia; Zuñiga, Cristal.
Afiliação
  • Briones-Baez MF; TECNM/Instituto Tecnológico de Ciudad Madero, División de Estudios de Posgrado e Investigación, Los Mangos 89440, Mexico.
  • Aguilera-Vazquez L; TECNM/Instituto Tecnológico de Ciudad Madero, División de Estudios de Posgrado e Investigación, Los Mangos 89440, Mexico.
  • Rangel-Valdez N; CONACyT-TECNM/Instituto Tecnológico de Ciudad Madero, División de Estudios de Posgrado e Investigación, Los Mangos 89440, Mexico.
  • Martinez-Salazar AL; TECNM/Instituto Tecnológico de Ciudad Madero, División de Estudios de Posgrado e Investigación, Los Mangos 89440, Mexico.
  • Zuñiga C; Department of Biology, San Diego State University, 5500 Campanile Drive, San Diego, CA 92182, USA.
Metabolites ; 12(7)2022 Jun 29.
Article em En | MEDLINE | ID: mdl-35888727
Studies enabled by metabolic models of different species of microalgae have become significant since they allow us to understand changes in their metabolism and physiological stages. The most used method to study cell metabolism is FBA, which commonly focuses on optimizing a single objective function. However, recent studies have brought attention to the exploration of simultaneous optimization of multiple objectives. Such strategies have found application in optimizing biomass and several other bioproducts of interest; they usually use approaches such as multi-level models or enumerations schemes. This work proposes an alternative in silico multiobjective model based on an evolutionary algorithm that offers a broader approximation of the Pareto frontier, allowing a better angle for decision making in metabolic engineering. The proposed strategy is validated on a reduced metabolic network of the microalgae Chlamydomonas reinhardtii while optimizing for the production of protein, carbohydrates, and CO2 uptake. The results from the conducted experimental design show a favorable difference in the number of solutions achieved compared to a classic tool solving FBA.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Tipo de estudo: Prognostic_studies Idioma: En Revista: Metabolites Ano de publicação: 2022 Tipo de documento: Article País de afiliação: México País de publicação: Suíça

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Tipo de estudo: Prognostic_studies Idioma: En Revista: Metabolites Ano de publicação: 2022 Tipo de documento: Article País de afiliação: México País de publicação: Suíça