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COVID-19 in healthcare workers in three hospitals in the South of the Netherlands, March 2020
Reina S Sikkema; Suzan Pas; David F. Nieuwenhuijse; Aine O'Toole; Jaco Verweij; Anne van der Linden; Irina Chestakova; Claudia Schapendonk; Mark R Pronk; Pascal Lexmond; Theo Bestebroer; Ronald J Overmars; Stefan van Nieuwkoop; Wouter van den Bijllaardt; Robbert G. Bentvelsen; Miranda M.L. van Rijen; Anton G.M. Buiting; Anne J.G. van Oudheusden; Bram M. Diederen; Anneke M.C. Bergmans; Annemiek van der Eijk; Richard Molenkamp; Andrew Rambaut; Aura Timen; Jan A.J.W. Kluytmans; Bas B. Oude Munnink; Marjolein Kluytmans; Marion P.G. Koopmans.
Afiliação
  • Reina S Sikkema; Viroscience, ErasmusMC, Rotterdam
  • Suzan Pas; Microvida Laboratory for Microbiology, Bravis Hospital, Roosendaal/ Microvida Laboratory for Microbiology, Amphia Hospital, Breda
  • David F. Nieuwenhuijse; Viroscience, ErasmusMC, Rotterdam
  • Aine O'Toole; University of Edinburgh, Edinburgh
  • Jaco Verweij; Laboratory for Medical Microbiology and Immunology, Elisabeth-TweeSteden Hospital, Tilburg
  • Anne van der Linden; Viroscience, ErasmusMC, Rotterdam
  • Irina Chestakova; Viroscience, ErasmusMC, Rotterdam
  • Claudia Schapendonk; Viroscience, ErasmusMC, Rotterdam
  • Mark R Pronk; Viroscience, ErasmusMC, Rotterdam
  • Pascal Lexmond; Viroscience, ErasmusMC, Rotterdam
  • Theo Bestebroer; Viroscience, ErasmusMC, Rotterdam
  • Ronald J Overmars; Viroscience, ErasmusMC, Rotterdam
  • Stefan van Nieuwkoop; Viroscience, ErasmusMC, Rotterdam
  • Wouter van den Bijllaardt; Microvida Laboratory for Microbiology, Amphia Hospital, Breda
  • Robbert G. Bentvelsen; Microvida Laboratory for Microbiology, Amphia Hospital, Breda/ Department of Medical Microbiology, Leiden University Medical Center, Leiden
  • Miranda M.L. van Rijen; Microvida Laboratory for Microbiology, Amphia Hospital, Breda
  • Anton G.M. Buiting; Laboratory for Medical Microbiology and Immunology, Elisabeth-TweeSteden Hospital, Tilburg/ Department of Infection Control, Elisabeth-TweeSteden Hospital, Tilb
  • Anne J.G. van Oudheusden; Department of Infection Control, Elisabeth-TweeSteden Hospital, Tilburg
  • Bram M. Diederen; Microvida Laboratory for Microbiology, Bravis Hospital, Roosendaal
  • Anneke M.C. Bergmans; Microvida Laboratory for Microbiology, Bravis Hospital, Roosendaal
  • Annemiek van der Eijk; Viroscience, ErasmusMC, Rotterdam
  • Richard Molenkamp; Viroscience, ErasmusMC, Rotterdam
  • Andrew Rambaut; University of Edinburgh, Edinburgh
  • Aura Timen; LCI, RIVM, Bilthoven/ VU University Amsterdam
  • Jan A.J.W. Kluytmans; Julius Center for Health Sciences and Primary Care, University Medical Center Utrecht, Utrecht/ Department of Infection Control, Amphia Hospital, Breda/ Microvi
  • Bas B. Oude Munnink; Viroscience, ErasmusMC, Rotterdam
  • Marjolein Kluytmans; Julius Center for Health Sciences and Primary Care, University Medical Center Utrecht, Utrecht/ Department of Infection Control, Amphia Hospital, Breda/Microvid
  • Marion P.G. Koopmans; Viroscience, ErasmusMC, Rotterdam
Preprint em Inglês | medRxiv | ID: ppmedrxiv-20079418
ABSTRACT
Ten days after the first reported case of SARS-CoV-2 infection in the Netherlands, 3.9% of healthcare workers (HCWs) in nine hospitals located in the South of the Netherlands tested positive for SARS-CoV-2 RNA. The extent of nosocomial transmission that contributed to the HCW infections was unknown. We combined epidemiological data, collected by means of structured interviews of HCWs, with whole genome sequencing (WGS) of SARS-CoV-2 in clinical samples from HCWs and patients in three of nine hospitals that participated in the HCW screening, to perform an in-depth analysis of sources and modes of transmission of SARS -CoV-2 in HCWs and patients. A total of 1,796 out of 12,022 HCWs (15%) of the three participating hospitals were screened, based on clinical symptoms, of whom 96 (5%) tested positive for SARS-CoV-2. We obtained complete genome sequences of 50 HCWs and 18 patients. Most sequences grouped in 3 clusters, with 2 clusters displaying local circulation within the region. The observed patterns are most consistent with multiple introductions into the hospitals through community acquired infections, and local amplification in the community. Although direct transmission in the hospitals cannot be ruled out, the data does not support widespread nosocomial transmission as source of infection in patients or healthcare workers.
Licença
cc_by_nc_nd
Texto completo: Disponível Coleções: Preprints Base de dados: medRxiv Tipo de estudo: Estudo prognóstico / Pesquisa qualitativa Idioma: Inglês Ano de publicação: 2020 Tipo de documento: Preprint
Texto completo: Disponível Coleções: Preprints Base de dados: medRxiv Tipo de estudo: Estudo prognóstico / Pesquisa qualitativa Idioma: Inglês Ano de publicação: 2020 Tipo de documento: Preprint
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