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Chinese Journal of Biotechnology ; (12): 368-371, 2003.
Article in Chinese | WPRIM | ID: wpr-270051

ABSTRACT

A full-length cDNA encoding a MYB-related regulatory gene was isolated from a cDNA library prepared from mRNAs of the red line callus of S. medusa by TD-PCR. The cDNA, designated SmP, is 969 nucleotides long and has an open reading frame of 771 bp with a deduced amino acid sequence of 256 residues. The putative protein of SmP has two typical conversed R2R3-Myb DNA-binding domains in N-terminal and displays a rather high degree of similarity to OsMYB from rice and LBMI from tobacco, showing 73% and 70% identity within the DNA-binding domains. However, the C-terminal domain of the SmP protein does not show obvious similarity to any other known protein sequence. It is rich in hydrophilic amino acids, especially in serine residues (18.38%), partly organized in homopolymeric stretches, a feature often found in activation domain of transcription factors.


Subject(s)
Amino Acid Sequence , Cloning, Molecular , Molecular Sequence Data , Phylogeny , Plant Proteins , Chemistry , Classification , Genetics , Metabolism , Polymerase Chain Reaction , Saussurea , Classification , Genetics , Metabolism , Sequence Homology, Amino Acid , Transcription Factors , Chemistry , Genetics , Metabolism
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