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1.
Rev. epidemiol. controle infecç ; 13(3): 130-136, jul.-set. 2023. ilus
Article in English | LILACS | ID: biblio-1531862

ABSTRACT

Background and objectives: colonization by extended-spectrum ß-lactamase (ESBL)-producing Klebsiella pneumoniae in Intensive Care Unit (ICU) patients is considered a risk factor for infections, and poses as a source of spreading these strains in hospital facilities. This study aimed to perform the genetic characterization of ESBL-producing K. pneumoniae isolates recovered from surveillance swabs in an ICU in northeastern Brazil. Methods: the isolates were recovered between 2018-2019 from the nasal, axillary, and rectal sites of 24 patients admitted to the ICU. Bacterial identification was performed by traditional biochemical tests. Antimicrobial susceptibility was assessed by disk diffusion, and ESBL phenotype was detected by double-disc synergy test. Polymerase chain reaction (PCR) for blaCTX-M, blaSHV, and blaTEM genes, PFGE, and MLST were carried out in representative isolates. Results: a total of 27 isolates were recovered from 18 patients (75%). The ESBL production was detected in 85% of isolates. Resistance to ciprofloxacin, sulfamethoxazole/trimethoprim and most of the ß-lactams tested was recurrent, except for carbapenems. The blaSHV, blaTEM, and blaCTX-M genes were found in high frequency, and the CTX-M-(1, 2 and 9) groups were identified. Seven sequence types (ST11, ST14, ST17, ST395, ST709, ST855, and ST3827) were described, most of them considered high-risk. Conclusion: these findings emphasize the potential threat of well-established high-risk clones in an ICU, and highlight the importance of monitoring these clones to prevent infections.(AU)


Justificativa e objetivos: a colonização por Klebsiella pneumoniae produtora de ß-lactamase de espectro estendido (ESBL) em pacientes de Unidade de Terapia Intensiva (UTI) é considerada um fator de risco para infecções, e representa uma fonte de disseminação dessas cepas em instalações hospitalares. Este estudo objetivou realizar a caracterização genética de isolados de K. pneumoniae produtores de ESBL recuperados de swabs de vigilância em uma UTI no Nordeste do Brasil. Métodos: os isolados foram recuperados entre 2018-2019 dos sítios nasal, axilar e retal de 24 pacientes internados na UTI. A identificação bacteriana foi realizada por testes bioquímicos tradicionais. A suscetibilidade antimicrobiana foi avaliada por disco-difusão, e o fenótipo ESBL foi detectado pelo teste de sinergia de duplo-disco. Polymerase chain reaction (PCR) para os genes blaCTX-M, blaSHV e blaTEM, PFGE e MLST foram realizados em isolados representativos. Resultados: foram recuperados 27 isolados de 18 pacientes (75%). A produção de ESBL foi detectada em 85% dos isolados. A resistência à ciprofloxacina, sulfametoxazol/trimetoprima e à maioria dos ß-lactâmicos testados foi recorrente, exceto para os carbapenêmicos. Os genes blaSHV, blaTEM e blaCTX-M foram encontrados em alta frequência, e os grupos CTX-M-(1, 2 e 9) foram identificados. Sete sequence types (ST11, ST14, ST17, ST395, ST709, ST855 e ST3827) foram descritos, a maioria deles considerados de alto risco. Conclusão: esses achados enfatizam a ameaça potencial de clones de alto risco bem estabelecidos em uma UTI, e destacam a importância do monitoramento desses clones para prevenir infecções.(AU)


Justificación y objetivos: la colonización por Klebsiella pneumoniae productora de ß-lactamasas de espectro extendido (BLEE) en pacientes de Unidades de Cuidados Intensivos (UCI) se considera un factor de riesgo para infecciones, y se presenta como una fuente de propagación de estas cepas en instalaciones hospitalarias. Este estudio tuvo como objetivo realizar la caracterización genética de aislamientos de K. pneumoniae productores de BLEE recuperados de hisopos de vigilancia en una UCI en el noreste de Brasil. Métodos: los aislamientos se recuperaron entre 2018-2019 de sitios nasales, axilares y rectales de 24 pacientes ingresados en la UCI. La identificación bacteriana se realizó mediante pruebas bioquímicas tradicionales. La susceptibilidad antimicrobiana se evaluó mediante difusión en disco, y el fenotipo BLEE se detectó mediante la prueba de sinergia de doble-disco. La polymerase chain reaction (PCR) para los genes blaCTX-M, blaSHV y blaTEM, PFGE y MLST se llevaron a cabo en aislamientos representativos. Resultados: se recuperaron 27 aislamientos de 18 pacientes (75%). La producción de ESBL se detectó en 85% de los aislamientos. La resistencia a ciprofloxacino, sulfametoxazol/trimetoprima y a la mayoría de los ß-lactámicos evaluados fue recurrente, excepto a los carbapenémicos. Los genes blaSHV, blaTEM y blaCTX-M se encontraron en alta frecuencia, y se identificaron los grupos CTX-M-(1, 2 y 9). Se describieron siete sequence types (ST11, ST14, ST17, ST395, ST709, ST855 y ST3827), la mayoría consideradas de alto riesgo. Conclusión: estos hallazgos enfatizan la amenaza potencial de los clones de alto riesgo bien establecidos en una UCI, y resaltan la importancia de monitorear estos clones para prevenir infecciones.(AU)


Subject(s)
Humans , beta-Lactamases , Clone Cells , Intensive Care Units , Klebsiella pneumoniae/genetics , Drug Resistance , Cross Infection/prevention & control
2.
Biomédica (Bogotá) ; 43(3): 374-384, sept. 2023. tab, graf
Article in Spanish | LILACS | ID: biblio-1533948

ABSTRACT

Introducción. Salmonella spp. es un agente patógeno zoonótico transmitido al humano por el agua o los alimentos contaminados. La presencia de ß-lactamasas de espectro extendido es un creciente problema para la salud pública debido a que estas enzimas confieren resistencia contra las cefalosporinas de tercera y cuarta generación. Objetivo. Caracterizar las ß-lactamasas de espectro extendido en aislamientos de Salmonella spp. recibidos por el programa de vigilancia de enfermedad diarreica aguda o enfermedad transmitida por alimentos del Grupo de Microbiología del Instituto Nacional de Salud. Materiales y métodos. Entre enero de 1997 y junio de 2022, se recibieron 444 aislamientos de Salmonella spp. resistentes, por lo menos, a una de las cefalosporinas de tercera generación. El fenotipo de las ß-lactamasas de espectro extendido se identificó con la prueba de doble disco. El ADN se extrajo por ebullición y mediante PCR se amplificaron los genes bla CTX-M, bla SHVy : ' a ILM. Resultados. Todos los aislamientos fueron positivos para la prueba de ß-lactamasas de espectro extendido. Los resultados de la amplificación por PCR fueron: bla CTX-M + bla TLM (n=200), bla CTX-M (n=177), bla SHV(n=16), bla SHV + bla CTX-M (n=6), bla TLM (n=13) y bla SHV + bla CTX-M + bla TLM (n=3). Del total, 26 aislamientos fueron negativos para los genes evaluados. Los aislamientos positivos para ß-lactamasas de espectro extendido se identificaron en Bogotá y en 21 departamentos: Chocó, Magdalena, Meta, Bolívar, Casanare, Cesar, Córdoba, Quindío, Atlántico, Tolima, Cauca, Cundinamarca, Huila, Boyacá, Caldas, Norte de Santander, Risaralda, Antioquia, Nariño, Santander y Valle del Cauca. Conclusión. La resistencia a las cefalosporinas de tercera generación en aislamientos de Salmonella spp. fue generada principalmente por bla CTX-M. El 44 % (197/444) de los aislamientos presentó resistencia a ampicilina, tetraciclina, cloranfenicol y trimetoprim- sulfametoxazol Los serotipos portadores de ß-lactamasas de espectro extendido más frecuentes fueron S. Typhimurium y S. Infantis.


Introduction. Salmonella spp. is a zoonotic pathogen transmitted to humans through contaminated water or food. The presence of extended-spectrum ß-lactamases is a growing public health problem because these enzymes are resistant to third and fourth generation cephalosporins. Objective. To characterize extended-spectrum ß-lactamases in Salmonella spp. isolates received by the acute diarrheal disease/foodborne disease surveillance program of the Grupo de Microbiología of the Instituto Nacional de Salud. Materials and methods. A total of 444 Salmonella spp. isolates, resistant to at least one of the cephalosporins, were obtained between January 1997 and June 2022. The extended- spectrum ß-lactamases phenotype was identified by the double disk test. DNA extraction was carried out by the boiling method, and the bla CTX-M, bla SHV, and bla TLM genes were amplified by PCR. Results. All the isolates were positive for the extended-spectrum ß-lactamases test. The genes identified were: bla CTX-M + ba TLM (n=200), bla CTX-M (n=177), bla SHV(n=16), bla SHV + bla CTX-M (n=6), bla TLM (n=13) and bla SHV + bla CTX-M + bla TLM (n=3). Twenty-six isolates were negative for the evaluated genes. Positive extended-spectrum ß-lactamases isolates were identified in Bogotá and 21 departments: Chocó, Magdalena, Meta, Bolívar, Casanare, Cesar, Córdoba, Quindío, Atlántico, Tolima, Cauca, Cundinamarca, Huila, Boyacá, Caldas, Norte de Santander, Risaralda, Antioquia, Nariño, Santander y Valle del Cauca. Conclusion. Resistance to third generation cephalosporins in Salmonella spp. isolates was mainly caused by bla CTX-M. Isolates were resistant to ampicillin, tetracycline, chloramphenicol, and trimethoprim-sulfamethoxazole (44 %; 197/444). The most frequent extended-spectrum ß-lactamases-expressing serotypes were Salmonella Typhimurium and Salmonella Infantis.


Subject(s)
Salmonella , Drug Resistance, Bacterial , beta-Lactamases
3.
Rev. panam. salud pública ; 47: e15, 2023. tab, graf
Article in English | LILACS-Express | LILACS | ID: biblio-1432102

ABSTRACT

ABSTRACT Objective. To describe antimicrobial resistance profiles of Escherichia coli and Salmonella spp. isolated from chicken carcasses and the antimicrobials commonly used in animals in Ecuador and provide information on antimicrobial resistance patterns for implementing evidence-based corrective measures. Methods. Meat samples were collected from chicken carcasses in 199 slaughterhouses across Ecuador as part of a national pilot study for monitoring antimicrobial resistance in agricultural sources in 2019. Samples were tested for E. coli and Salmonella spp. Sensitivity to 10 critically important and three highly important antimicrobials (from a human health perspective) was assessed. The country report submitted to the World Organization for Animal Health was accessed to extract the quantity of antimicrobials produced or imported for use in animals. Results. Of 383 samples, E. coli was isolated from 148 (39%) and Salmonella spp. from 20 (5%) samples. Ninety percent of the isolates were resistant to at least one critically important antimicrobial. Resistance was highest to erythromycin (E. coli 76%; Salmonella spp. 85%) and tetracycline (E. coli 71%; Salmonella spp. 90%). Critically or highly important antimicrobials (colistin, tetracycline, trimethoprim/sulfamethoxazole) formed the bulk (87%) of antimicrobials used in animals as per the World Organization for Animal Health report. Conclusions. High prevalence of antimicrobial resistance in poultry in Ecuador calls for the development of guidelines and regulations on the use of antimicrobials and for engagement with livestock producers. The existing surveillance system needs to be strengthened to improve the monitoring of antimicrobial use and evolving resistance patterns.


RESUMEN Objetivo. Describir los perfiles de resistencia antimicrobiana de las bacterias Escherichia coli y Salmonella spp. aisladas en carne de pollo y los antimicrobianos comúnmente empleados en animales en Ecuador, así como proporcionar información sobre los patrones de resistencia a los antimicrobianos para poner en marcha medidas correctivas basadas en la evidencia. Métodos. Se recogieron muestras de carne de pollo en 199 mataderos de todo Ecuador en el marco de un estudio piloto nacional para monitorear la resistencia a los antimicrobianos en fuentes agrícolas en el 2019. Se analizaron las muestras en busca de E. coli y Salmonella spp. Se evaluó la sensibilidad a diez antimicrobianos de importancia crítica y tres muy importantes (para la salud humana). Se accedió al informe de país presentado ante la Organización Mundial de Sanidad Animal para obtener la cantidad de antimicrobianos producidos o importados para su uso en animales. Resultados. De 383 muestras, se aisló E. coli en 148 (39%) y Salmonella spp. en 20 (5%). En total, 90% de las cepas aisladas fueron resistentes a al menos un antimicrobiano de importancia crítica. Hubo una mayor resistencia a la eritromicina (E. coli: 76%; Salmonella spp.: 85%) y a la tetraciclina (E. coli: 71%; Salmonella spp.: 90%). Los antimicrobianos de importancia crítica o muy importantes (colistina, tetraciclina, trimetoprima/sulfametoxazol) constituyeron la mayor parte (87%) de los antimicrobianos empleados en animales según el informe de la Organización Mundial de Sanidad Animal. Conclusiones. Debido a la alta prevalencia de la resistencia a los antimicrobianos en las aves de corral en Ecuador, son imprescindibles la elaboración de directrices y regulaciones sobre el uso de antimicrobianos y el compromiso con los productores pecuarios. Es necesario fortalecer el sistema de vigilancia existente para mejorar el seguimiento del uso de antimicrobianos y de la evolución de los patrones de resistencia.


RESUMO Objetivo. Descrever perfis de resistência aos antimicrobianos em Escherichia coli e Salmonella spp. isoladas de carcaças de frango e os antimicrobianos comumente usados em animais no Equador e fornecer informações sobre padrões de resistência aos antimicrobianos para implementar medidas corretivas baseadas em evidências. Métodos. Foram coletadas amostras de carne de carcaças de frango em 199 abatedouros em todo o Equador como parte de um estudo piloto nacional para monitorar a resistência aos antimicrobianos de origem agrícola em 2019. Foram testadas amostras de E. coli e Salmonella spp. Foi avaliada a sensibilidade a 10 agentes antimicrobianos de importância crítica e três agentes antimicrobianos muito importantes (do ponto de vista da saúde humana). O relatório do país apresentado à Organização Mundial de Saúde Animal foi acessado para extrair a quantidade de antimicrobianos produzidos ou importados para uso em animais. Resultados. De 383 amostras, E. coli foi isolada em 148 (39%) e Salmonella spp. em 20 (5%). Noventa por cento dos isolados foram resistentes a pelo menos um antimicrobiano de importância crítica. A resistência foi maior à eritromicina (E. coli, 76%; Salmonella spp., 85%) e à tetraciclina (E. coli, 71%; Salmonella spp., 90%). Antimicrobianos de importância crítica ou muito importantes (colistina, tetraciclina, trimetoprim/sulfametoxazol) responderam pela maior parte (87%) dos antimicrobianos utilizados em animais, conforme o relatório da Organização Mundial de Saúde Animal. Conclusões. A alta prevalência de resistência aos antimicrobianos na avicultura no Equador exige o desenvolvimento de diretrizes e regulamentos sobre o uso de antimicrobianos e o envolvimento com os produtores de gado e avícolas. O sistema de vigilância existente precisa ser reforçado para melhorar o monitoramento do uso de antimicrobianos e a evolução dos padrões de resistência.

4.
Rev. Fac. Med. (Bogotá) ; 70(4): e200, Oct.-Dec. 2022. tab
Article in English | LILACS-Express | LILACS | ID: biblio-1422768

ABSTRACT

Abstract Introduction: Extended spectrum beta-lactamases (ESBL) produced by gram-negative bacteria have been associated with increased hospital morbidity and mortality, longer hospital stays, use of carbapenems, and higher health care costs. Few studies have assessed the risk factors for infection by ESBL-producing germs in intensive care units (ICU). Objective: To determine the risk factors for healthcare-associated infections (HAIs) by ESBL-producing Klebsiella pneumoniae and Escherichia coli in an ICU of a public tertiary care hospital and to assess the impact of this type of infection on mortality. Materials and methods: A case-control study with a 1:2 ratio (97 cases and 194 controls) was conducted in critically ill patients admitted to the ICU of a public tertiary care hospital in Bogotá D.C. (Colombia) between January 2016 and December 2019, and in which a HAI by ESBL-producing K. pneumoniae or E. coli (cases: n=97) or K. pneumoniae or E. coli with a normal antibiotic resistance pattern (controls: n=194) was documented. Bivariate analyses were performed using the chi-squared and the Mann-Whitney U tests. A logistic regression model was used in the multivariate analysis, and a two-tailed test was performed with the p-values obtained in the bivariate analyses. Results: ESBL-producing K. pneumoniae and E. coli isolates were identified in 57 (58.76%) and 40 (41.24%) patients, respectively. These isolates were obtained mainly from urine samples (30,92%), followed by peritoneal fluid (27.80%). In the multivariate analysis, the presence of urinary tract infection on admission to the ICU was identified as a risk factor (OR=5.63, 95%CI: 1.918-16.53;; p=0.002). The mortality rate was 28.17% (26.29% in the controls and 31.95% in the cases), but no significant difference was observed between groups (p=0.311). Conclusion: Urinary tract infection on admission to the ICU was a risk factor for HAIs by ESBL-producing K. pneumoniae or E. coli. Furthermore, no significant difference was observed between cases and controls in terms of mortality.


Resumen Introducción. Las betalactamasas de espectro extendido (BLEE) producidas por gérmenes gram negativos se han asociado con aumento de la morbilidad y mortalidad hospitalaria, mayor estancia hospitalaria, uso de carbapenémicos y mayores costos de atención en salud. Existen pocos trabajos que evalúen los factores de riesgo para infección por gérmenes productores de BLEE en unidades de cuidado intensivo (UCI). Objetivo. Determinar los factores de riesgo para el desarrollo de infecciones asociadas a la atención en salud (IAAS) por Klebsiella pneumoniae y Escherichia coli productoras de BLEE en una UCI de un hospital público de tercer nivel de atención y evaluar el impacto de este tipo de infección en la mortalidad. Materiales y métodos. Estudio de casos y controles con relación 1:2 realizado en pacientes críticamente enfermos admitidos entre enero de 2016 y diciembre de 2019 a la UCI de un hospital público de tercer nivel de Bogotá D.C., Colombia, y en los que se documentó una IAAS por K. pneumoniae o E. coli productoras de BLEE (casos; n=97) y por K. pneumoniae o E. coli con fenotipo de resistencia natural (controles; n=194). Se realizaron análisis bivariados mediante las pruebas de chi-cuadrado y U de Mann-Whitney. En el análisis multivariado se usó un modelo de regresión logística, con una prueba de dos colas con los valores p obtenidos en los análisis bivariados. Resultados. Se identificaron aislamientos de K. pneumoniae y de E. coli productoras de BLEE en 57 (58,76%) y 40 (41,24%) de los casos, respectivamente y estos aislamientos se obtuvieron principalmente de muestras de orina (30.92%), seguido de líquido peritoneal (27.83%). En el análisis multivariado, la presencia de infección de vías urinarias al ingreso a UCI fue identificada como factor de riesgo (OR=5.63, IC95%:1.918-16.527; p=0,002). La tasa de mortalidad fue del 28.17% (26.29% en los controles y 31.95% en los casos), pero no se observó una diferencia significativa entre grupos (p=0.311). Conclusión. La infección de vías urinarias al ingreso a la UCI fue un factor de riesgo para la IAAS por K. pneumoniae o E. coli productoras de BLEE. Además, no se observó una diferencia significativa entre los casos y controles en términos de mortalidad.

5.
Article | IMSEAR | ID: sea-220624

ABSTRACT

Introduction Pseudomonas and Acinetobacter species are frequently isolated non-fermenting gram negative bacteria in a variety of hospital acquired infections. Metallo-beta-lactamases have become a serious threat in treating infections because of their multiple drug resistance including carbapenems. To determine Objectives the prevalence of MBL production among Pseudomonas and Acinetobacter species and to evaluate the different phenotypic MBL detection methods. A total of 104 isolates of carbapenem resistant Pseudomonas (78) and Materials and methods Acinetobacter (26) from different clinical specimens were tested for MBL production by Modi?ed Hodge Test, Combined Disk Test and Double Disk Synergy Test. Antibiotic susceptibility was performed by Kirby- Bauer Disk Diffusion method. Results Pseudomonas aeruginosa (11.29%) Acinetobacterbaumanii (11.53%) were the predominant MBL producers. MBL production was detected 61.53%, 84.61% and 38.46 % by DDST( Doule disc synergy test), CDT (Combined disc test), and MHT (Modi?ed Hodge test) respectively. Colistin and Polymyxin B are the only option available for treating such infections. MBL Conclusion production among Pseudomonas and Acinetobacter species are increasing due to the continuous use of carbapenems and selective antibiotic pressure. Strict antibiotic policy and infection control practices help prevent the further spread.

6.
Article in Spanish | LILACS-Express | LILACS | ID: biblio-1440959

ABSTRACT

Objetivo: determinar la resistencia antibiótica de Echerichia coli, en urocultivos, según produccion de BLEE, en pacientes hospitalizados. El estudio: Diseño descriptivo - retrospectivo. La identificación bacteriana se hizo con VITEK XL, la susceptibilidad, con las pautas del CLSI M100. 30 edicion. Hallazgos. E. coli BLEE positivo, presento resistencia de 0% a: Meropenem, ertapenem, tigeciclina y colistina. Piperacilina/tazobactam, nitrofurantoina, imipenem, amicacina con 16.7%, 6.2%, 5% y 1% respectivamente. E. Coli BLEE negativo, presento resistencia de 0% a: cefotaxima, cefuroxime, tigeciclina y piperacilina/tazobactam. Ceftriaxona, cefepime, gentamicina, cefazolina, ceftazidima, nitrofurantoina, meropenem, amicacina, imipenem y ertapenem con 14.7%, 13%, 13%, 10.7%, 9.7%, 9.1%, 9.1%, 8%, 5%, 2.7%, respectivamente. Conclusion: Meropenen, ertapenem, tigeciclina, colestina, piperacilina/tazobactam, nitrofurantoina, amicacina y imipenem, con resistencia menor de 20%, fueron los mismos, para E. coli BLEE positivo, y E. coli, sin considerar la produccion de BLEE.


ABSTRAC Objective: to determine the antibiotic resistance of Echerichia coli, in urine cultures, according to ESBL production, in hospitalized patients. The study: Descriptive-retrospective design. Bacterial identification was done with VITEK XL, susceptibility, with the CLSI M100 guidelines. 30 edition. Findings: E. coli ESBL positive, presented 0% resistance to: Meropenem, ertapenem, tigecycline and colistin. Piperacillin/tazobactam, nitrofurantoin, imipenem, amikacin with 16.7%, 6.2%, 5% and 1% respectively. E. Coli ESBL negative, presented 0% resistance to: cefotaxime, cefuroxime, tigecycline and piperacillin/tazobactam. Ceftriaxone, cefepime, gentamicin, cefazolin, ceftazidime, nitrofurantoin, meropenem, amikacin, imipenem, and ertapenem with 14.7%, 13%, 13%, 10.7%, 9.7%, 9.1%, 9.1%, 8%, 5%, 2.7%, respectively. Conclusion: Meropenen, ertapenem, tigecycline, cholesterol, piperacillin/tazobactam, nitrofurantoin, amikacin and imipenem, with less than 20% resistance, were the same for ESBL-positive E. coli, and E. coli, without considering ESBL production.

7.
Rev. peru. med. exp. salud publica ; 39(4): [456-462], oct. 2022. tab, graf
Article in Spanish | LILACS | ID: biblio-1424346

ABSTRACT

La colonización fecal en lactantes por bacterias resistentes a los antimicrobianos es un potencial riesgo para futuras terapias antibióticas. Nuestro objetivo fue determinar la frecuencia y características sociodemográficas de lactantes portadores fecales de enterobacterias resistentes a ciprofloxacina (PFRC) y sus genes de resistencia asociados. Analizamos muestras fecales de 41 niños lactantes residentes en el distrito de Talara-Piura, Perú, en 2019. Evaluamos la presencia de 3 genes de resistencia a quinolonas: aac(6')-Ib-cr, qnrB y oqxA y 2 de betalactamasas: bla CTX-M, bla PER-2.El 68% de lactantes fueron PFRC, Escherichia coli (83,3%) fue el más frecuente. El análisis genotípico detectó: oqxA (41,1%), qnrB (26,7%) y aac(6')-Ib-cr (20%) y al gen bla CTX-M en el 93,3% de los aislados con betalactamasas. La elevada frecuencia de PFRC nos alertan sobre el potencial riesgo en la pérdida de utilidad de esta familia antibiótica en el área de estudio.


Fecal colonization by antimicrobial-resistant bacteria in infants is a potential risk for future antibiotic therapy. We aimed to determine the sociodemographic characteristics and frequency of infants who were fecal carriers of ciprofloxacin-resistant enterobacteriaceae (FCCRE) and their associated resistance genes. We analyzed fecal samples from 41 infants from the district of Talara, Piura, Peru in 2019. The presence of 3 quinolone resistance genes was evaluated: aac(6')-Ib-cr, qnrB and oqxA as well as of 2 beta-lactamase genes: bla CTX-M,bla PER-2. We found that 68% of infants were FCCRE, Escherichia coli (83.3%) was the most frequent bacteria. The genotypic analysis detected: oqxA (41.1%), qnrB (26.7%), aac(6')-Ib-cr (20%) and the bla CTX-M gene (93.3%) of the isolates with beta-lactamases. The high frequency of FCCRE alerts us of the potential risk of this antibiotic family becoming less useful over time.


Subject(s)
Humans , Male , Infant, Newborn , Infant , beta-Lactamases , Drug Resistance , Infant, Newborn , Quinolones , Escherichia coli , Peru , Enterobacteriaceae , Anti-Bacterial Agents
8.
Rev. peru. med. exp. salud publica ; 39(1): 98-103, ene.-mar. 2022. tab, graf
Article in Spanish | LILACS | ID: biblio-1389934

ABSTRACT

RESUMEN Los asilos de ancianos son instituciones con una alta prevalencia de infecciones del tracto urinario ocasionado por Escherichia coli productoras de ß-lactamasas de espectro extendido (BLEE), con diversos factores de virulencia. El objetivo del estudio fue determinar la frecuencia del gen bla CTX-M y de ocho genes de virulencia en 35 E. coli uropatógenas productoras de BLEE provenientes de seis asilos en Perú, durante el 2018. El 57,1% (20/35) de las E. coli fueron portadores del gen bla CTX-M. Además, se obtuvo una frecuencia del 46% (15/35) y 37% (13/35) de hly-alfa y cnf-1, respectivamente; elevada presencia de los genes iucC (63%, 22/35), aer (94%, 33/35) y chuA (94%, 33/34) y una frecuencia del 46% (16/35) y del 91% (32/34) de los genes pap GII y nanA, respectivamente. Existe predominancia en la distribución del gen bla CTX-M, además de una alta frecuencia de exotoxinas que le confieren una ventaja competitiva para diseminarse hacia el torrente sanguíneo.


ABSTRACT Nursing homes are institutions with high prevalence of urinary tract infections caused by ESBL-producing E. coli with several virulence factors. The aim of this study was to determine the frequency of the bla CTX-M gene and eight virulence genes in 35 ESBL-producing uropathogenic E. coli from six nursing homes in Peru during 2018. Of the E. coli samples, 57.1% (20/35) were carriers of the bla CTX-M gene. Furthermore, we obtained frequencies of 46% (15/35) and 37% (13/35) for hly-alpha and cnf-1, respectively; we also found high presence of the iucC (63%, 22/35), aer (94%, 33/35) and chuA genes (94%, 33/34) as well as a frequency of 46% (16/35) and 91% (32/34) for the pap GII and nanA genes, respectively. The bla CTX-M gene is predominant and a high frequency of exotoxins gives it a competitive advantage for spreading into the bloodstream.


Subject(s)
Humans , Male , Female , Aged , Aged, 80 and over , Virulence , Escherichia coli , Uropathogenic Escherichia coli , Anti-Bacterial Agents , Urinary Tract Infections , beta-Lactam Resistance , Virulence Factors , Enterobacteriaceae Infections , Homes for the Aged , Infections
9.
Chinese Journal of Urology ; (12): 744-750, 2022.
Article in Chinese | WPRIM | ID: wpr-993914

ABSTRACT

Objective:To investigate the pathogenic bacteria profiles in preoperative urine bacterial cultures of patients with infected kidney stones and use antibacterial drugs to prevent recurrence.Methods:The data of 79 cases with infected kidney stones admitted to the Second Affiliated Hospital of Zhengzhou University from January 2017 to July 2021 were retrospectively analyzed, among whom 29 (36.7%) were male and 50 (63.3%) were female. The age ranged from 17-75 years, with a median age of 49.0 (40, 55) years. Fifteen cases (19.0%) combined hypertension, 13 cases (16.5%) combined diabetes mellitus, and 3 cases (3.8%) combined with cardiovascular disease. Fifty-one cases (64.6%) were diagnosed with cast infectious stones. All patients underwent surgical lithotripsy, and postoperative review of the urological computerized tomography (CT) revealed no residual stones defined as complete lithotripsy, and postoperative oral medication was continued to control infection and prevent stone recurrence. According to post-hospitalization compliance, patients were divided into high and low compliance groups. The high compliance group consisted of patients who returned to the hospital regularly for routine urinalysis and urine bacterial culture after discharge, followed the doctor's prescription for standardized antibacterial drug therapy, and complied with urease inhibitor therapy for ≥6 months. The low compliance group included patients who did not take sensitive antimicrobial drugs regularly and/or were unable to adhere to the medication even after the reduction of vinblastine due to adverse events such as tremor, palpitations, headache, anemia, or gastrointestinal discomfort. The recurrence of stones at 3, 6 and 12 months of follow-up was compared between the two groups.Results:Of the 79 cases in this group, 56(70.9%) were completely clear of stone after surgery. Thirty-three cases (41.8%) presented positive in preoperative urine bacterial culture, and the most common causative organism was Aspergillus oddus in 17 cases (21.5%), followed by Escherichia coli in 8 cases (10.1%) and Klebsiella pneumoniae in 3 cases (3.8%). Among the 17 positive cases of A. oddis, six were positive for ultra broad spectrum β-lactamases (ESBLs), 6/6 were resistant to ampicillin, cefazolin, and cotrimoxazole, 1/6 were resistant to amikacin, cefoxitin, and ticarcillin/stick acid, and none were resistant to imipenem, polymyxin, or aminotrans (0/6 cases). Of the cases, 11 were negative for ESBLs. Ten out of eleven cases were resistant to ampicillin. Furthermore, 8/11 cases were resistant to cefazolin, levofloxacin, ciprofloxacin, and cotrimoxazole and 1/11 were resistant to cefoxitin, cefaclor, furantoin, amikacin, and minocycline, and 0/11 were resistant to imipenem, ticarcillin/stick acid, aminotrans. ESBLs positive strains were resistant to 78.6% of the tested drugs (cefaclor, cefazolin, ceftazidime, furantoin, norfloxacin, levofloxacin, ciprofloxacin, cefoxitin, amoxicillin/rod acid, ticarcillin/rod acid, ampicillin, ceftriaxone, cefotaxime, cefuroxime, cefepime, gentamicin, cotrimoxazole, tobramycin, amikacin, tetracycline, chloramphenicol, and minocycline) at a lower rate of resistance than ESBLs positive strains. Of the eight positive cases of E. coli, seven were ESBLs positive, 7/7 were resistant to ampicillin, cefazolin, cefotaxime, cefuroxime, and cefepime, 1/7 were resistant to cefoxitin and minocycline, and 0/7 were resistant to imipenem, furantoin, or amikacin. One case was ESBLs negative and was resistant to all antimicrobial drugs except for ampicillin. Stone recurrence rates at 3, 6, and 12 months after discharge were 9.1%(4/44) and 31.4%(11/35), 13.6%(6/44), respectively, in the high compliance group, and 60.0%(21/35), 36.4%(16/44), and 71.4% (25/35), respectively, in the low compliance group. All differences were statistically significant.Conclusion:The most common pathogenic bacteria isolated from urine bacterial cultures of patients with infectious stones were A. chimaera, E. coli, and K. pneumoniae. The resistance rate of ESBLs-positive strains to antimicrobial drugs was significantly higher than that of ESBL-negative strains, and the resistance rate of antimicrobial drugs such as β-lactamase inhibitors, cefoxitin, amikacin, and imipenem was low. Combination therapy with standardized sensitive antimicrobial drugs and urease inhibitors significantly reduced the recurrence rate of stones among patients.

10.
Philippine Journal of Health Research and Development ; (4): 23-30, 2022.
Article in English | WPRIM | ID: wpr-987603

ABSTRACT

Background@#Extended-spectrum beta-lactamases (ESBLs), which allow bacteria to become resistant to commonly used antibiotics against common pathogens such as Klebsiella pneumoniae, are a significant public health concern as their presence severely limits treatment options. Discovery and development of new drug entities are critical to effectively combat infections with these increasingly common antibiotic-resistant variants. @*Objective@#Computational approaches can accelerate and reduce the cost of the discovery phase by screening for inhibitors of “druggable” pathogen enzyme targets in silico. In this study, protein structures of the ESBL enzymes SHV-1 and CTX-M-15 were used as targets in molecular docking experiments to identify potential inhibitors for K. pneumoniae. @*Methodology@#5000 compounds from the Enamine Real HTS compound database were screened in silico for binding to SHV-1 and CTX-M-15. Twenty-six (26) compounds that were identified to have more favorable interactions compared to Avibactam, a known inhibitor of the target proteins, were tested for cytotoxic activities in vivo using Resazurin Microtiter Assay (REMA) against a K. pneumoniae clinical isolate containing both SHV-1 and CTX-M-15 resistance genes. @*Results and Conclusion@#Despite favorable binding energies in in silico screening, most of the compounds exhibited negligible inhibition on the growth of the K. pneumoniae clinical isolate in in vitro assays. This may be attributed to the fact that a phenotypic whole-cell assay, instead of an enzyme-targeted assay, was used for validation. Cell permeability requires a different set of molecular parameters which were not part of the study. Doxorubicin exhibited the highest in vitro bactericidal activity against this strain, which agrees with its known activity against many other bacterial pathogens and may be a promising compound for further lead optimization.


Subject(s)
Drug Resistance, Microbial
11.
Chinese Journal of Microbiology and Immunology ; (12): 669-675, 2022.
Article in Chinese | WPRIM | ID: wpr-958241

ABSTRACT

Objective:To analyze the characteristics of drug resistance genes in a Klebsiella pneumoniae strain coproducing carbapenemases KPC-2 and NDM-5. Methods:Klebsiella pneumoniae KPN-hnqyy was separated from the stool specimen of a patient in the Hematology Department of Affiliated Cancer Hospital of Zhengzhou University. The strain was identified with a BD Phenix-M50 automated microbiology system and the minimum inhibitory concentration against the strain was measured as well. The genotypes of the carbapenemases were tested by enzyme immunochromatographic assay and PCR method. The transferability of related plasmids was analyzed by conjugation test. Whole-genome sequencing of the strain was conducted using PacBio and Illumina platforms. The MLST type, resistance gene and plasmid type of the strain were retrieved in BacWGSTdb. The genome and open reading frame sequence of the strain were compared using Easyfig_2.2.3. Visual cycle graphs were generated using BRIG v0.95. Results:Klebsiella pneumoniae KPN-hnqyy was resistant to carbapenem antibiotics. It belonged to ST11 and carried two carbapenemase genes of blaKPC-2 and blaNDM-5. The conjugant only harbored the blaKPC-2 gene. Whole-genome sequencing revealed that the strain contained one chromosome and three plasmids. Its chromosome genome shared more than 99.9% similarity with that of Klebsiella pneumonia KP69 and KP19-2029. Moreover, a similar IncR and IncFⅠ resistance gene fusion region was contained in different types of plasmids carried by them: the blaKPC-2 gene was located in a structure—which evolved from the Tn3-△Tn4401-Tn1721/Tn1722 sequence—inside this fusion region with its ends inserted into the transposase IS26 gene; the blaNDM-5 gene was located on a transposon containing the special plasmids of the insertion fragment in phages, with its ends inserted into the transposase IS26 gene too. Conclusions:The IncR and IncFⅡ resistance gene fusion region of blaKPC-2 carried by Klebsiella pneumoniae ST11 might be widely coexistent with the chromosomal genome. The blaNDM-5 gene carried by special plasmids might be accidentally obtained through gene recombination mediated by transposable element IS26. The wide transmission of Klebsiella pneumoniae ST11 carrying the blaKPC-2 gene in China and its ability to obtain other carbapenemase genes through transposable element IS26 were well worth attention.

12.
Malaysian Journal of Microbiology ; : 571-579, 2022.
Article in English | WPRIM | ID: wpr-979398

ABSTRACT

ABSTRACT@#In recent years, antimicrobial resistance (AMR) has become a global public health concern. The growth of resistant bacteria is increasing dramatically, while the number of new antibiotics accessible is decreasing. This is especially true in the case of Pseudomonas aeruginosa, an important causative agent of healthcare-associated infections. The ability of P. aeruginosa to survive in different environments and on medical devices has made it more resistant to antibiotics. This causes bacteremia in hospitalized patients, ventilator-associated pneumonia, catheter-associated urinary tract infections and wound infections, particularly in patients with severe burns, bed ulcers and immunocompromised individuals. The rise in the AMR rate in both developed and developing countries may be attributed to a number of factors such as variations in the standard health care, large population, awareness about antibiotic resistance, inadequate training on rationale antibiotic usage and inadequate infection control facilities in many hospitals. The emergence of Extensive Drug Resistance (XDR) and Pan Drug Resistance (PDR) among organisms that cause various infections leads to increased treatment costs, morbidity and mortality, leaving no therapeutic options. This review highlights the different mechanisms of antibiotic resistance, including intrinsic and acquired resistance, which are frequently observed in P. aeruginosa.


Subject(s)
Pseudomonas aeruginosa , Drug Resistance, Microbial
13.
Montevideo; s.n; 2022. 174 p. tab.
Thesis in Spanish | LILACS, UY-BNMED, BNUY | ID: biblio-1438097

ABSTRACT

INTRODUCCIÓN: Las infecciones del torrente sanguíneo se asocian con alta morbi- mortalidad, siendo frecuentemente causadas por enterobacterias, y cuando éstas producen ß-lactamasas de espectro extendido (BLEEs), la morbi-mortalidad, duración internación y costos sanitarios son aún mayores. OBJETIVO: Caracterizar los episodios de bacteriemia por enterobacterias en el Hospital Universitario en un período de 2 años. METODOLOGÍA: Estudio observacional, analítico, casos controles (1:1), con recolección de datos retrospectiva. Población: pacientes ≥18 años atendidos en el Hospital Universitario en período 01/01/2014 - 30/11/2015, con hemocultivo positivo por enterobacteria. Recolección datos clínicos-epidemiológicos: revisión registros médicos. Estudio microbiológico: Identificación y susceptibilidad - equipo automatizado Vitek® 2 system (bioMérieux, Marcy l'Etoile, France). Sensibilidad a fosfomicina: disco-difusión (E. coli) y dilución en agar (resto de las enterobacterias). Ceftazidime-avibactam: disco-difusión. Aislamientos BLEE+ según Vitek: confirmación y caracterización de BLEE: reacción en cadena de la polimerasa (PCR) y secuenciación. Investigación mecanismos transferibles de resistencia a quinolonas (TMQR) qnrB y aac(6')-Ib-cr: PCR. Caracterización molecular enterobacterias BLEE más prevalentes: MultiLocus Sequence Typing (MLST) y Pulsed Field Gel Electrophoresis (PFGE). Análisis casos y controles: I)Factores de riesgo bacteriemia BLEE: Casos - pacientes con bacteriemia por enterobacteria BLEE(+). Controles - pacientes con bacteriemia por enterobacteria BLEE (-) sensible a cefalosporinas tercera generación. II) Factores de riesgo mortalidad intrahospitalaria: Casos - pacientes con mortalidad hospitalaria por cualquier causa. Controles ­ pacientes egresados vivos. Análisis estadístico: paquete estadístico IBM SPSS Statistics 23. Análisis casos y controles: cálculo de odd ratios (OR) e intervalo de confianza al 95% (IC95%). Variables con p ≤0.05 en análisis univariado incluídas en análisis multivariado (regresión logística). Proyecto aprobado por Comité Ética del Hospital de Clínicas y financiado por ANII (FMV_3_2016_1_126580, Fondo María Viña ­ 2016). RESULTADOS: Principales resultados microbiológicos: 174 episodios de bacteriemia y 178 enterobacterias recuperadas, con confirmación molecular de producción BLEE en 41 enterobacterias (23%): 29 Klebsiella pneumoniae, 7 Escherichia coli, 2 Serratia marcescens, 1 Enterobacter cloacae, 1 Citrobacter freundii y 1 Morganella morganii. E. coli enterobacteria más recuperada (n=69), pero K. pneumoniae la enterobacteria BLEE más prevalente (56 aislamientos y 29/56 BLEE+), seguida de E. coli (7/69). Distribución de las enterobacterias BLEE+ según enzima detectada: CTX- M-15: 32 aislamientos, CTX-M-15 + CTX- M-14: 3 aislamientos, CTX-M-2: 3, CTX-M-8: 2, SHV-5: 1. Susceptibilidad enterobacterias BLEE: meropenem 100%, ceftazidime-avibactam 100%, fosfomicina 100%, imipenem 98%, ertapenem 97,6%, colistin 92,7%, amikacina 85,4%, gentamicina 36,6%, tigeciclina 29,3%, piperacilina-tazobactam 26,8%, trimetoprim-sulfametoxazol 19,5%, ciprofloxacina 12,2%. Detección de mecansimos transferibles de resistencia a quinolonas (TMQR) en 33/41 aislamientos (80,5%): aac(6')-Ib-cr: 22 aislamientos, qnrB: 2 aislamientos, y aac(6')-Ib-cr + qnrB: 9 aislamientos. Detección de secuenciotipos "exitosos" en principales enterobacterias BLEE: E. coli ST 73 (1), ST 95(1) y ST 38 (2) y ST 258 en K. pneumoniae (12/29=41,4%). También detección ST 258 en un aislamiento de K. pneumoniae BLEE (-). Principales resultados clínicos ­ epidemiológicos: Se revisaron 98 registros médicos; 60 bacteriemias nosocomiales, 29 comunitarias, 8 asociadas a los cuidados de la salud, 1 sin dato. 41 BLEE(+) y 57 BLEE(-). 80 pacientes vivos al egreso, 17 fallecidos y 1 sin dato. Factores de riesgo bacteriemia BLEE(+) (análisis multivariado) : presencia de dispositivo médico a permanencia previo (p 0,001, OR 55,2, IC 95%5,5-553) ) y bacteriemia no comunitaria (p 0,008 OR 17,4 IC95% 2,1-143). Factores de riesgo mortalidad intrahospitalaria (análisis multivariado): enfermedad hematooncológica o neoplásica (OR 4,687 IC95% 1,207-18,200) y score qPitt ≥2 (OR 10,332 IC95% 2,639-40,442). Antibioticoterapia empírica activa in vitro para la bacteriemia: 10/29(34,5%) en pacientes BLEE(+) y 36/40 BLEE(-) (90%). Se encontró asociación entre bacteriemia BLEE + y recibir antibioticoterapia empírica inactiva (p<0,0001) ; siendo el riesgo de recibir antibioticoterapia empírica inactiva 17 veces mayor en bacteriemias BLEE(+) respecto a BLEE(-). Se encontró que la mediana de la duración de la hospitalización a partir del episodio de bacteriemia es más prolongada en casos BLEE+ que en los controles BLEE- (22,5 versus 14 días, p=0,006). CONCLUSIONES: Enterobacteria BLEE más prevalente K. pneumoniae, y dentro de ella alta prevalencia del clon exitoso de alto riesgo ST 258. Predominio de CTX-M-15, y alta prevalencia (> 80%) de TMQR en aislamientos BLEE. Presencia de BLEE aumenta significativamente el riesgo de recibir antibioticoterapia empírica inactiva. Necesidad de mantener vigilancia de perfiles de susceptibilidad y clones circulantes y considerar posibles factores de riesgo al momento se seleccionar antibioticoterapia empírica.


BACKGROUND: Bloodstream infections are associated with high morbidity and mortality, being frequently caused by Enterobacteriaceae, and when they produce extended spectrum ß-lactamases (ESBL), morbidity, mortality and healthcare costs are even higher. OBJECTIVE: We aimed to characterize Enterobacteriaceae bacteremia episodes at the "Hospital de Clínicas", in a 2 years period. METHODS: Observational, analytical study, case-controls (1: 1), with retrospective data collection. Population: ≥18 years old patients attended at the "Hospital de Clínicas" between 01/01/2014 and 11/30/2015, with Enterobacteriaceae recovered from blood culture. Collection of clinical-epidemiological data: review of medical records. Microbiological study: identification and susceptibility: automated system Vitek® 2 (bioMérieux, Marcy l'Etoile, France). Susceptibility to fosfomycin: disc-diffusion (E. coli) and agar dilution (others Enterobacterales). Ceftazidime-avibactam: disc-diffusion. ESBL (+) isolates according to Vitek: ESBL confirmation and characterization by Polymerase Chain Reaction (PCR) and sequencing. Investigation of transferable mechanisms of quinolone resistance (TMQR) qnrB and aac (6 ')- Ib-cr: PCR. Molecular characterization of the most prevalent ESBL enterobacterales: MultiLocus Sequence Typing (MLST) and Pulsed Field Gel Electrophoresis (PFGE). Case-control analysis: I) ESBL bacteremia risk factors: Cases - patients with bacteremia by an ESBL-producing enterobacteria. Controls - patients with third generation cephalosporin susceptible enterobacteria, not ESBL-producing. II) In-hospital mortality risk factors: Cases - patients with in-hospital mortality from any cause. Controls - patients discharged alive. Statistical analysis: IBM SPSS Statistics 23 statistical package. Case-control analysis: calculation of odd ratios (OR) and 95% confidence interval (95% CI). Variables with p ≤0.05 in univariate analysis were included in multivariate analysis (logistic regression). Project approved by the Hospital de Clinicas Ethics Committee and financed by ANII (FMV_3_2016_1_126580, María Viña Fund - 2016). RESULTS: Main microbiological results: 174 bacteremia episodes and 178 enterobacterales recovered. ESBL production confirmated in 41 isolates (23%): 29 Klebsiella pneumoniae, 7 Escherichia coli, 2 Serratia marcescens, 1 Enterobacter cloacae, 1 Citrobacter freundii y 1 Morganella morganii.E. coli was the most recovered enterobacteria (n = 69), but K. pneumoniae was the most prevalent ESBL producing specie (56 isolates and 29/56 ESBL +), followed by E. coli (7/69). Distribution of ESBL producing enterobacterales according to enzyme detected: CTX- M-15: 32 isolates, CTX-M-15 + CTX-M-14: 3 isoaltes, CTX-M-2: 3, CTX-M-8: 2, SHV-5: 1. Antibiotic susceptibility in ESBL producers: meropenem 100%, ceftazidime-avibactam 100%, fosfomycin 100%, imipenem 98%, ertapenem 97,6%, colistin 92,7%, amikacin 85,4%, gentamicin 36,6%, tigecycline 29,3%, piperacillin-tazobactam 26,8%, trimethroprim sulfamethoxazole 19,5%, ciprofloxacin 12,2%. Detection of TMQR in 33/41 isolates (80.5%): aac(6')-Ib-cr: 22 isolates, qnrB: 2 isolates, and aac(6')Ib-cr + qnrb: 9 isolates. We detected "successful" sequence types within E. coli ESBL producing: ST 73 (1 isolate), ST 95 (1) and ST 38 (2) and a high prevalence of ST 258 among K. pneumoniae isolates (12/29 = 41.4%). ST 258 was also detected in one ESBL(-) K. pneumoniae isolate. Main clinical-epidemiological results: 98 medical records were reviewed; 60 bacteremia episodes were classified as nosomial, 29 as community acquired, 8 health care associated, and for one episode, data was insufficient for its classification. 41 were ESBL(+) and 57 ESBL(-). 80 patients alive at discharge, 17 deceased and 1 without data. Risk factors for ESBL bacteremia according to multivariate analysis were: use of medical device prior to hospitalization (OR = 50.226, 95% CI 4.367 - 577.721) and non-community bacteremia (OR 12.052, 95% CI 1.350-107.605). In-hospital mortality risk factors (multivariate analysis): hemato-oncological or neoplasic disease (OR 4,687 95% CI 1,207-18,200) and qPitt score ≥2 (OR 10,332 95% CI 2,639-40,442). The empirical antibiotic therapy was active according to the susceptibility test in 10/29 (34,5%) patients with ESBL (+) bacteremia and in 36/40 patients with ESBL (-) (90%). Presence of ESBL was found to be associated with inactive empirical antibiotic therapy (p<0.0001), and risk for receiving inactive empirical antibiotic therapy was 17 times higher in ESBL (+) compared to ESBL (-). The mean length of hospital stay after the onset of bacteraemia was longer in the cases of ESBL producers than in the cases of non-ESBL producers ( 22,5 vs. 14 days; P=0.006). CONCLUSIONS: K. pneumoniae was the most prevalent ESBL producing specie, and within it we found a high prevalence of the successful high-risk clone ST258. CTX-M-15 was the main ESBL detected and we found high prevalence (80%) of TMQR among ESBL(+). Presence of ESBL significantly increases the risk of receiving inactive empirical antibiotic therapy. Need to maintain surveillance of susceptibility profiles and circulating clones and to take into account possible risk factors when selecting empirical antibiotic therapy.


Subject(s)
Humans , Male , Female , Adult , Middle Aged , Aged , Aged, 80 and over , Young Adult , Bacterial Infections , beta-Lactamases , Public Health , Enterobacteriaceae Infections
14.
Vive (El Alto) ; 5(14): 518-528, 2022.
Article in Spanish | LILACS | ID: biblio-1410346

ABSTRACT

Escherichia coli (E. coli) constituye una de las principales enterobacterias patógenas causantes de infecciones asociadas a la asistencia en salud, con alto impacto a nivel hospitalario y comunitario por su elevada tasa de morbilidad y mortalidad. El mecanismo de defensa de estas bacterias es mediante la generación de enzimas de resistencia, como la producción de Beta-lactamasas de espectro extendido. OBJETIVO: caracterizar la resistencia a betalactámicos de espectro extendido a partir de su prevalencia en aislados de Escherichia coli de origen comunitario e intrahospitalario de la ciudad de Azogues. MATERIALES Y MÉTODOS: estudio de tipo descriptivo, documental. La población estuvo conformada por 877 registros de la base de datos WHONET de aislados de E. coli procedentes de muestras de origen comunitario e intrahospitalario del laboratorio del Hospital Homero Castanier Crespo. RESULTADOS: el 75,5% de los aislados fueron de mujeres y el 24,5 % de varones. La media de edad fue 43,5 años. La frecuencia de E. coli productora de BLEE fue del 17,7 % con mayor frecuencia en varones (23,7%), en el área de clínica (25,2%), cirugía (16,8%) y en muestras de herida quirúrgica (11,6%). Predominó la resistencia a betalactámicos (84,5%) y cefalosporinas de primera y segunda generación mayor al 48%. Los carbapenemes (imipenen 97,3% y meropenem 96,7%), aminoglucósidos (amikacina 94,9 y gentamicina 80,5), fosfomicina (90,3) y nitrofurantoina (96,7%) mostraron mayor sensibilidad. CONCLUSIONES: la monitorización constante de enzimas BLEE, permite la detección temprana de patrones de sensibilidad y a la vez orienta a un tratamiento terapéutico adecuado, evitando generación de nuevas resistencias y altas tasas de morbilidad y mortalidad.


Escherichia coli (E. coli) is one of the main pathogenic enterobacteria causing infections associated with health care, with high impact at hospital and community level due to its high morbidity and mortality rate. The defense mechanism of these bacteria is through the generation of resistance enzymes, such as the production of extended spectrum beta-lactamases. OBJECTIVE: to characterize extended-spectrum beta-lactam resistance based on its prevalence in Escherichia coli isolates of community and intrahospital origin in the city of Azogues. MATERIALS AND METHODS: descriptive, documentary study. The population consisted of 877 records from the WHONET database of E. coli isolates from community and in-hospital samples from the Homero Castanier Crespo Hospital laboratory. RESULTS: 75.5% of the isolates were from females and 24.5% from males. The mean age was 43.5 years. The frequency of BLEE-producing E. coli was 17.7%, with a higher frequency in males (23.7%), in the clinical area (25.2%), surgery (16.8%) and in surgical wound samples (11.6%). Resistance to beta-lactams predominated (84.5%) and first and second generation cephalosporins was greater than 48%. Carbapenems (imipenem 97.3% and meropenem 96.7%), aminoglycosides (amikacin 94.9 and gentamicin 80.5), fosfomycin (90.3) and nitrofurantoin (96.7%) showed higher sensitivity. CONCLUSIONS: the constant monitoring of BLEE enzymes allows the early detection of sensitivity patterns and at the same time guides to an adequate therapeutic treatment, avoiding the generation of new resistances and high morbidity and mortality rates.


A Escherichia coli (E.coli) é uma das principais enterobactérias patogênicas que causam infecções associadas aos cuidados de saúde, com alto impacto em nível hospitalar e comunitário devido a sua alta taxa de morbidade e mortalidade. O mecanismo de defesa dessas bactérias é através da geração de enzimas de resistência, tais como a produção de beta-lactamases de espectro estendido. OBJETIVO: caracterizar a resistência beta-lactam de amplo espectro com base em sua prevalência em Escherichia coli isolados de origem comunitária e intra-hospitalar na cidade de Azogues. MATERIAIS E MÉTODOS: estudo descritivo, documental. A população consistia de 877 registros do banco de dados WHONET de E. coli isolados de amostras comunitárias e hospitalares do laboratório do Hospital Homero Castanier Crespo. RESULTADOS: 75,5% dos isolados eram de fêmeas e 24,5% de machos. A idade média era de 43,5 anos. A freqüência da E. coli produtora de BLEE foi de 17,7%, com maior freqüência em homens (23,7%), na área clínica (25,2%), na cirurgia (16,8%) e em amostras de feridas cirúrgicas (11,6%). A resistência aos beta-lactâmicos (84,5%) e às cefalosporinas de primeira e segunda geração predominou (mais de 48%). Carbapenems (imipenem 97,3% e meropenem 96,7%), aminoglicosídeos (amikacin 94,9 e gentamicina 80,5), fosfomicina (90,3) e nitrofurantoína (96,7%) mostraram maior sensibilidade. CONCLUSÕES: o monitoramento constante das enzimas BLEE permite a detecção precoce de padrões de sensibilidade e, ao mesmo tempo, orienta para um tratamento terapêutico adequado, evitando a geração de novas resistências e altas taxas de morbidade e mortalidade.


Subject(s)
Escherichia coli , Bacteria
15.
Vive (El Alto) ; 4(12)dic. 2021.
Article in Spanish | LILACS-Express | LILACS | ID: biblio-1390543

ABSTRACT

Resumen La bacteria Klebsiella pneumoniae es la causante de infecciones intrahospitalarias multirresistentes, posee diversos mecanismos de resistencia como la producción de enzimas betalactamasas cuya acción afecta a los antibióticos betalactámicos. Objetivo: Caracterizar los mecanismos de resistencia presentes en aislados clínicos con Klebsiella pneumoniae identificados mediante métodos fenotípicos en el Hospital Monte Sinai desde enero de 2018 hasta agosto de 2020. Materiales y métodos: Estudio positivista con un enfoque cuantitativo de corte transversal descriptivo de diseño documental. La población estuvo conformada por 274 datos de aislados clínicos identificados con Klebsiella pneumoniae. Los cuales conformaron la totalidad de la muestra con un muestreo por cobertura total. Mismos que fueron recopilados de fuentes secundarias ingresados en la base de datos del departamento de Microbiología. Para el análisis se utilizó estadística descriptiva. Resultados: Klebsiella pneumoniae mostró mayor frecuencia en el año 2020 con el 35%. Se identificó al mecanismo de resistencia BLEE con el 27,7% y carbapenemasas tipo KPC con el 7.7 %, con mayor presencia en el sexo masculino. Presentó una mayor resistencia a Penicilinas, una sensibilidad moderada a Cefalosporinas, Aminoglucósidos, Quinolonas y una alta sensibilidad a los Carbapenémicos, Tigeciclina y Colistina. Los aislados se clasificaron como multidrogorresistentes, con mayor frecuencia en Urocultivo, Aspirado bronquial, Líquido corporal, Punta de Catéter y Hemocultivo en áreas de Hospitalización, UCI y Neonatología. Conclusiones: Los mecanismos de resistencia de K. pneumoniae a los antibióticos son un hallazgo común en ambientes hospitalarios independientemente de sexo, servicio hospitalario o tipo de muestra, convirtiéndose en un problema de salud pública.


Abstract The bacterium Klebsiella pneumoniae is the cause of multiresistant intrahospital infections, it has various resistance mechanisms such as the production of beta-lactamase enzymes whose action affects beta-lactam antibiotics. Objective: To characterize the resistance mechanisms present in clinical isolates with Klebsiella pneumoniae identified by phenotypic methods at Monte Sinai Hospital from January 2018 to August 2020. Materials and methods: Positivist study with a descriptive cross-sectional quantitative approach to documentary design. The population consisted of 274 data from clinical isolates identified with Klebsiella pneumoniae. Which made up the entire sample with a total coverage sampling. The same ones that were collected from secondary sources entered in the database of the Microbiology department. Descriptive statistics were used for the analysis. Results: Klebsiella pneumoniae showed a higher frequency in 2020 with 35%. The ESBL resistance mechanism was identified with 27.7% and KPC-type carbapenemases with 7.7%, with a higher presence in males. It presented a greater resistance to Penicillins, a moderate sensitivity to Cephalosporins, Aminoglycosides, Quinolones and a high sensitivity to Carbapenems, Tigecycline and Colistin. The isolates were classified as multidrug resistant, more frequently in Urine culture, Bronchial aspirate, Body fluid, Catheter Tip and Blood culture in Hospitalization, ICU and Neonatology areas. Conclusions: The resistance mechanisms of K. pneumoniae to antibiotics are a common finding in hospital settings regardless of sex, hospital service or type of sample, becoming a public health problem.


Resumo A bactéria Klebsiella pneumoniae é causa de infecções intra-hospitalares multirresistentes, possui diversos mecanismos de resistência como a produção de enzimas beta-lactamase cuja ação afeta os antibióticos beta-lactâmicos. Objetivo: Caracterizar os mecanismos de resistência presentes em isolados clínicos de Klebsiella pneumoniae identificados por métodos fenotípicos no Hospital Monte Sinai de janeiro de 2018 a agosto de 2020. Materiais e métodos: Estudo positivista com abordagem quantitativa transversal descritiva do design documental. A população consistia em 274 dados de isolados clínicos identificados com Klebsiella pneumoniae. O que constituiu toda a amostra com uma amostra de cobertura total. Os mesmos que foram coletados em fontes secundárias e cadastrados no banco de dados do departamento de Microbiologia. Estatísticas descritivas foram utilizadas para a análise. Resultados: Klebsiella pneumoniae apresentou maior frequência em 2020 com 35%. O mecanismo de resistência a ESBL foi identificado com 27,7% e carbapenemases do tipo KPC com 7,7%, com maior presença no sexo masculino. Apresentou maior resistência às Penicilinas, sensibilidade moderada às Cefalosporinas, Aminoglicosídeos, Quinolonas e alta sensibilidade aos Carbapenêmicos, Tigeciclina e Colistina. Os isolados foram classificados como multirresistentes, com maior frequência em Urocultura, Aspirado Brônquico, Fluido Corporal, Ponta de Cateter e Hemocultura em Hospitalização, UTI e Neonatologia. Conclusões: Os mecanismos de resistência de K. pneumoniae aos antibióticos são um achado comum em ambientes hospitalares independentemente do sexo, serviço hospitalar ou tipo de amostra, tornando-se um problema de saúde pública.

16.
Vive (El Alto) ; 4(12)dic. 2021.
Article in Spanish | LILACS-Express | LILACS | ID: biblio-1390546

ABSTRACT

Resumen Staphylococcus aureus es un microorganismo de importancia tanto a nivel hospitalario como en la comunidad; considerado parte de la microbiota normal en los humanos cuando existe condiciones apropiadas se comporta como oportunista, provoca infecciones leves hasta complicadas. Existen cepas de S. aureus multirresistentes a los antibióticos, debido a la adquisición por vía horizontal de genes de resistencia; entre ellas Staphylococcus aureus resistentes a meticilina (SARM), agentes etiológicos de infecciones graves relacionados directamente al consumo de alimentos contaminados. Objetivo. Analizar los posibles riesgos a los que se expone el ser humano al consumir alimentos contaminados por SARM, además de identificar los alimentos con mayor riesgo de contaminación y los factores que llevan a esta condición. Metodología. Mediante una revisión sistemática de estudios que indican la presencia de SARM en alimentos reportados en América latina. Las bases de datos consultadas: PubMed, SCOPUS, SCIELO y ProQuest mediante la declaración PRISMA. Se detectaron 30 estudios siendo elegibles 12. Resultados. En América Latina se observó en Brasil mayor evidencia de SARM, luego Colombia y Chile; en los estudios encontrados indican que los alimentos con frecuencia mayor de contaminación de alimentos son los lácteos y sus derivados; productos cárnicos. Conclusiones. Se evidencia la estrecha relación entre el agente causal de contaminación que es SARM en alimentos a nivel de América Latina. El producto que más impacto ha presentado es la leche y sus derivados, los cuales al ser productos muy consumibles la salud de la población está en riesgo por la acción de enterotoxinas.


Abstract Staphylococcus aureus is an important microorganism both at hospital and community level; considered part of the normal microbiota in humans when appropriate conditions exist, it behaves as an opportunist, causing mild to complicated infections. There are strains of S. aureus multiresistant to antibiotics, due to the horizontal acquisition of resistance genes, including methicillin-resistant Staphylococcus aureus (MRSA), etiological agents of serious infections directly related to the consumption of contaminated food. Objective. To analyze the possible risks to which humans are exposed when consuming food contaminated by MRSA, in addition to identifying the foods with the highest risk of contamination and the factors that lead to this condition. Methodology. Through a systematic review of studies indicating the presence of MRSA in food reported in Latin America. Databases consulted: PubMed, SCOPUS, SCIELO and ProQuest through the PRISMA statement. Thirty studies were detected and 12 were eligible. Results. In Latin America, the greatest evidence of MRSA was observed in Brazil, followed by Colombia and Chile; the studies found indicate that the foods with the highest frequency of food contamination are dairy products and their derivatives; meat products. Conclusions. There is evidence of a close relationship between the causal agent of MRSA contamination in food in Latin America. The product that has had the greatest impact is milk and its derivatives, which, being highly consumable products, put the health of the population at risk due to the action of enterotoxins.


Resumo Staphylococcus aureus é um microorganismo importante tanto a nível hospitalar como comunitário; considerado parte da microbiota normal em humanos quando existem condições apropriadas, comporta-se como oportunista, causando infecções leves a complicadas. Existem estirpes de S. aureus multiresistentes aos antibióticos, devido à aquisição horizontal de genes de resistência, incluindo Staphylococcus aureus resistente à meticilina (MRSA), agentes etiológicos de infecções graves directamente relacionadas com o consumo de alimentos contaminados. Objectivo. Analisar os possíveis riscos a que os seres humanos estão expostos ao consumir alimentos contaminados por MRSA, para além de identificar os alimentos com maior risco de contaminação e os factores que levam a esta condição. Metodologia. Através de uma revisão sistemática de estudos que indicam a presença de MRSA nos alimentos reportados na América Latina. Bases de dados consultadas: PubMed, SCOPUS, SCIELO e ProQuest, utilizando a declaração PRISMA. Foram detectados trinta estudos, 12 dos quais eram elegíveis. Resultados. Na América Latina, a maior evidência de MRSA foi observada no Brasil, seguido pela Colômbia e Chile; os estudos encontrados indicam que os alimentos com maior frequência de contaminação de alimentos são produtos lácteos e seus derivados; produtos de carne. Conclusões. Há provas de uma relação estreita entre o agente causal da contaminação por MRSA nos alimentos na América Latina. O produto que tem tido maior impacto é o leite e seus derivados, que como são produtos altamente consumíveis, a saúde da população está em risco devido à acção das enterotoxinas.

17.
Rev. cuba. med. trop ; 73(2): e503, 2021. tab, graf
Article in Spanish | LILACS, CUMED | ID: biblio-1347482

ABSTRACT

Introdución: Las ß-lactamasas AmpC son enzimas con capacidad hidrolítica, pueden ser de tipo constitutivo o inducible. No existe un método estandarizado para su determinación fenotípica por normas internacionales; la detección de estas mediante el uso de la biología molecular podría ser una alternativa útil para vigilancia y control de la diseminación de clones circulantes en el entorno hospitalario. Objetivo: Determinar el fenotipo de resistencia y genes expresados en la producción de ß-lactamasas AmpC en bacilos gramnegativos de aislados clínicos en un centro hospitalario. Métodos: Estudio observacional, descriptivo y de corte transversal. Se seleccionaron 78 cepas bacterianas como portadoras de ß- lactamasas AmpC. Se les realizó prueba de aproximación de disco; a las cepas con resultado positivo se seleccionaron para extracción de ADN y PCR multiplex para detección de 6 familias genes AmpC. Se determinó la frecuencia por tipo de muestra, servicio y comparación con el perfil de susceptibilidad. Resultados: De las cepas seleccionadas con fenotipo AmpC, el 57,6 por ciento (45/78) se consideró caso confirmado ß-lactamasas AmpC por su positividad para la prueba confirmatoria. La técnica molecular utilizada confirmó en el 40 por ciento (18/45) la presencia de genes AmpC. Se obtuvo con mayor frecuencia el gen MIR n= 9 (20 por ciento), seguido de DHA n= 7 (15 por ciento). Conclusiones: La detección oportuna de genes que codifican para ß-lactamasas AmpC permite establecer estrategias para evitar la circulación mediada por plásmidos en hospitales, así como utilizar mejores opciones terapéuticas que no induzcan a otros mecanismos de resistencia(AU)


Introduction: AmpC ß--lactamases are enzymes with hydrolytic activity. They may be either constitutive or inducible. No standardized method is available for their phenotypical determination by international standards. Their detection by molecular biology could be a useful alternative for the surveillance and control of the spread of clones circulating in hospital environments. Objective: Determine the resistance phenotype and genes expressed in the production of AmpC ß-lactamases in Gram-negative bacilli from clinical isolates in a hospital. Methods: An observational descriptive cross-sectional study was conducted. A total 78 bacterial strains were selected as carriers of AmpC ß-lactamases. Disc approximation tests were performed. The strains testing positive were selected for DNA extraction and multiplex PCR for detection of six AmpC gene families. Determination was made of the frequency per sample type, service and comparison with the susceptibility profile. Results: Of the strains selected with AmpC phenotype, 57.6 percent (45/78) were considered to be AmpC β-lactamase confirmed cases, due to their positive confirmatory test. The molecular technique used confirmed the presence of AmpC genes in 40 percent (18/45) of the cases. The gene most commonly obtained was MIR n= 9 (20 percent), followed by DHA n= 7 (15 percent). Conclusions: Timely detection of genes encoding for AmpC ß-lactamases makes it possible to set up strategies to prevent plasmid-mediated circulation in hospitals, as well as apply better therapeutic options that do not induce other resistance mechanisms(AU)


Subject(s)
Humans , Male , Female , Drug Resistance, Microbial/drug effects , beta-Lactam Resistance/drug effects , Multiplex Polymerase Chain Reaction , Molecular Biology , Epidemiology, Descriptive , Cross-Sectional Studies , Colombia , Genes/physiology
18.
Rev. cuba. med. trop ; 73(2): e577, 2021. tab, graf
Article in Spanish | LILACS, CUMED | ID: biblio-1347481

ABSTRACT

Introducción: Las cepas de Escherichia coli productoras de β-lactamasas de espectro extendido son patógenos multirresistentes y una de las bacterias que más contribuyen con la resistencia antibiótica bacteriana en la clínica. Sin embargo, se aíslan cada vez con más frecuencia de ambientes naturales, tales como los ecosistemas acuáticos en los cuales se emplea como un indicador de contaminación fecal. Objetivo: Evaluar la susceptibilidad a los antibióticos y la producción de enzimas ß-lactamasas de espectro extendido de aislados de Escherichia coli procedentes de ecosistemas dulceacuícolas de La Habana. Métodos: Se analizaron 43 aislados de E. coli provenientes de los ríos Almendares, Quibú y Luyanó de La Habana. Se determinó la susceptibilidad a 18 antibióticos y la producción fenotípica de ß-lactamasas de espectro extendido según las normas del Instituto de Estándares para el Laboratorio Clínico. La detección molecular de las enzimas se realizó mediante reacción en cadena de la polimerasa. Se calculó el índice de multirresistencia a los antibióticos y los patrones de resistencia de cada aislado de E. coli- ß-lactamasas de espectro extendido. Resultados: El 65 por ciento de los aislados de E. coli fueron resistentes al menos a un antibiótico y el 35 por ciento fueron sensibles a todos los antibióticos. El fenotipo ß-lactamasas de espectro extendido fue detectado en siete aislados; de estos, cuatro fueron portadores del gen bla CTX-M-1 y tres presentaron bla TEM. El 37 por ciento de los aislados de E. coli mostraron valores de índices de multirresistencia a los antibióticos menores que 0,22; el 16 por ciento de 0,22; el 9,3 por ciento mayor que 0,5; y el 5 por ciento mayor que 0,7. Los aislados de E. coli-BLEE mostraron corresistencia a las familias de las tetraciclinas, quinolonas, aminoglucósidos y macrólidos. Conclusiones: La presencia de aislados ambientales multirresistentes de E. coli productores de ß-lactamasas de espectro extendido en ecosistemas dulceacuícolas de La Habana destaca la necesidad de implementar estrategias de control para prevenir la diseminación de estos aislados en los ambientes naturales(AU)


Introduction: Extended-spectrum β-lactamase-producing Escherichia coli strains are multiresistant pathogens and one of the bacteria contributing most greatly to bacterial antibiotic resistance in clinical practice. However, they are increasingly isolated from natural environments, such as aquatic ecosystems, where they are used as fecal pollution indicators. Objective: Evaluate antibiotic susceptibility and extended-spectrum ß-lactamase enzyme production in Escherichia coli isolates from freshwater ecosystems in Havana. Methods: An analysis was conducted of 43 E. coli isolates from the rivers Almendares, Quibú and Luyanó in Havana. Determination was made of susceptibility to 18 antibiotics and phenotypic production of extended-spectrum ß-lactamases according to standards from the Clinical and Laboratory Standards Institute. Molecular detection of the enzymes was performed by polymerase chain reaction. Estimation was carried out of the antibiotic multiresistance index and the resistance patterns of each extended-spectrum E. coli ß-lactamase isolate. Results: Of the E. coli isolates studied, 65 percent were resistant to at least one antibiotic, whereas 35 percent were sensitive to all antibiotics. The extended-spectrum ß-lactamase phenotype was detected in seven isolates, of which four were carriers of the gene bla CTX-M-1 and three contained bla TEM. 37 percent of the E. coli isolates displayed antibiotic multiresistance index values below 0.22, 16 percent of 0.22, 9.3 percent above 0.5 and 5 percent above 0.7. ESBL E. coli isolates displayed co-resistance to the families tetracyclines, quinolones, aminoglycosides and macrolides. Conclusions: The presence of multiresistant extended-spectrum ß-lactamase-producing environmental E. coli isolates in Havana freshwater ecosystems highlights the need to implement control strategies aimed at preventing the spread of these isolates in natural environments(AU)


Subject(s)
Humans , Drug Resistance, Microbial , Polymerase Chain Reaction , Ecosystem , Disease Susceptibility , Environmental Pollution , Escherichia coli , Fresh Water , Reference Standards , Pollution Indicators
19.
Medicina (B.Aires) ; 81(6): 946-953, ago. 2021. graf
Article in Spanish | LILACS-Express | LILACS | ID: biblio-1365087

ABSTRACT

Resumen Las bacterias productoras de carbapenemasas están involucradas en infecciones y colonizaciones y se asocian a elevada morbimortalidad. Su identificación facilita el diseño y la implementación de intervenciones dirigidas a reducir el riesgo de infecciones y óbitos. El objetivo de este estudio fue determinar la prevalencia de microorganismos productores de carbapenemasas en el principal hospital público de la ciudad de Corrientes, Argentina, y determinar sus perfiles de susceptibilidad a antibióticos comúnmente usados en la práctica clínica. Fueron incluidos 674 muestras clínicas provenientes del mismo número de adultos de las diferentes unidades de internación del Hospital Escuela Gral. José Francisco de San Martín durante el período septiembre-diciembre 2018. La identificación de las bacterias se realizó mediante pruebas bioquímicas manua les y la susceptibilidad a los antimicrobianos se evaluó según las recomendaciones del Clinical and Laboratory Standars Institute. Fueron identificadas 115 bacterias productoras de carbapenemasas de tipo KPC (90, 78%), OXA-ACI (24, 21%) y OXA-163 (~1%). De los 56 (49%) microorganismos involucrados en infecciones, la mayoría de las del tipo KPC (n=32; 57%) mostró sensibilidad solo a amikacina (27/32; 84%), mientras que la mayoría de las del tipo OXA-ACI (n=24; 43%) solo frente a minociclina (17/24; 71%) y colistina (19/24; 79%). En todas las unidades de hospitalización investigadas se comprobó la presencia de microorganismos productores de carbapenemasas y alta frecuencia de resistencia a antimicrobianos de uso habitual en la práctica clínica. Esta información es relevante para adecuar los esquemas terapéuticos y las medidas higiénico-sanitarias a la realidad local.


Abstract Carbapenemase-producing bacteria are involved in infections and colonizations and associated with high morbidity and mortality. Their identification facilitates the design and implementation of interventions aimed at reducing the risk of infections and deaths. The objective of this study was to determine the prevalence of carbapenemase-producing microorganisms in the main public hospital in the city of Corrientes, Argentina, and to determine their susceptibil ity to antibiotics commonly used in clinical practice. We analyzed 674 clinical samples from the same number of adults admitted to different inpatient units of the Hospital Escuela Gral. José Francisco de San Martín during the period September-December 2018. The bacterial identification was carried out through manual biochemical tests and the susceptibility to antimicrobials was evaluated according to the recommendations of the Clinical and Laboratory Standards Institute. We identified 115 carbapenemase-producing bacteria of the following types: KPC (90, 78%), OXA-ACI (24, 21%) and OXA-163 (~1%). Among the microorganisms involved in infections (n = 56; 49%), most of those of the KPC type (n = 32; 57%) showed sensitivity only against amikacin (27/32; 84%), while most of those of the OXA-ACI type ( 24; 43%) showed significant sensitivity only against minocycline (17/24; 71%) and colistin (n = 19/24; 79%). This study demonstrated the presence of carbapenemase-producing microorgan isms in all the investigated hospital units and a high frequency of resistance to antimicrobials commonly used in clinical practice. This information is relevant to adapt the therapeutic schemes and hygienic-sanitary measures to the local reality.

20.
Infectio ; 25(1): 22-27, ene.-mar. 2021. tab, graf
Article in Spanish | LILACS, COLNAL | ID: biblio-1154397

ABSTRACT

Resumen Introducción: La antibiótico-resistencia es un fenómeno por el cual las bacterias logran sobrevivir al tratamiento con antimicrobianos; con incidencia en ambientes intra y extrahospitalarios como: fuentes hídricas, sector agrario/ganadero y fómites. Objetivo: Describir bacterias presentes en fómites de alta circulación en una región centro-occidental de Colombia junto a su perfil de sensibilidad fenotípica y presencia de genes para betalactamasas tipo TEM-full, OXA-3 y SHV-full. Metodología: Se aislaron cepas bacterianas de billetes, pasamanos de escaleras eléctricas y botones de cajeros automáticos; se evaluó su perfil de sensibilidad fenotípica por medio de concentración mínima inhibitoria-técnica automatizada/Vitek2® y genes para betalactamasas tipo TEM-full, OXA-3 y SHV-full mediante PCR convencional. Resultados: Se obtuvo 30 aislados; Acinetobacter baumannii complex, fue la más común; el fómite con mayor aislados y resistencia fueron los billetes; el 53% portó al menos uno de los genes estudiados. Se identificaron bacterias gramnegativas con resistencia frente a: Imipinem, Piperacilina/Tazobactam, Colistina, Ceftazidima, Tigeciclina y Ceftriaxona; bacterias grampositivas con resistencia frente a: Quinupristina/Dalfopristina, Minociclina, Tetraciclina, Teicoplanina, Nitrofuratoina, Oxacilina, Clindamicina, Trimetropina-sulfametoxazol, y Minociclina. Conclusión: Teniendo en cuenta la circulación de cepas con estas resistencias, es importante la educación en la comunidad para evitar la adquisición o propagación de infecciones por manipulación inadecuada de fómites.


Abstract Introduction: Antibiotic-resistance is a phenomenon by which bacteria manage to survive antimicrobial treatment; with incidence in intra and extra hospital environments such as: water sources, agricultural / livestock sector and fomites. Aim: To describe bacteria present in high circulation fomites in a central-western region of Colombia, with their phenotypic sensitivity profile and presence of genes beta-lactamases (TEM, OXA3 and SHV). Methodology: We isolate bacterial strains from banknotes, escalator handrails and ATM buttons. We evaluated its phenotypic sensitivity profile by minimal inhibitory concentration automated technique using Vitek 2® and presence of genes for beta-lactamases type TEM-full, OXA-3 and SHV-full by conventional PCR. Results: A total of 30 isolates were obtained; Acinetobacter baumannii complex, was the most common; banknotes were the form with the highest number of isolates and resistance. Of the total isolates, 53% carried at least one of the genes studied. Phenotypically, gram-negative bacteria were identified with resistance against: Imipinem, Piperacillin / Tazobactam, Colistin, Ceftazidime, Tigecycline and Ceftriaxone; Gram-positive bacteria with resistance to: Quinupristin / Dalfopristin, Minocycline, Tetracycline, Teicoplanin, Nitrofuratoin, Oxacillin, Clindamycin, Trimethropine-sulfamethoxazole, and Minocycline. Conclusion: Taking into account the circulation of strains with these resistances, it is important to educate the community to avoid the acquisition or spread of infections due to the inappropriate handling of this type of inanimate elements.


Subject(s)
Humans , Bacteria , Colombia , Drug Resistance, Bacterial , Elevators and Escalators , Fomites , Infections , Anti-Infective Agents , Anti-Bacterial Agents
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