Efficacy of Diphenyleneiodonium Chloride (DPIC) Against Diverse Plant Pathogens

Many of the fungicides and antibiotics currently available against plant pathogens are of limited use due to the emergence of resistant strains. In this study, we examined the effects of diphenyleneiodonium chloride (DPIC), an inhibitor of the superoxide producing enzyme NADPH oxidase, against fungal and bacterial plant pathogens. We found that DPIC inhibits fungal spore germination and bacterial cell proliferation. In addition, we demonstrated the potent antibacterial activity of DPIC using rice heads infected with the bacterial pathogen Burkholderia glumae which causes bacterial panicle blight (BPB). We found that treatment with DPIC reduced BPB when applied during the initial flowering stage of the rice heads. These results suggest that DPIC could serve as a new and useful antimicrobial agent in agriculture.

Timing of Fusarium Head Blight Infection in Rice by Heading Stage

Fusarium graminearum causes the devastating plant disease Fusarium head blight and produces mycotoxins on small cultivated grains. To investigate the timeframe of F. graminearum infection during rice cultivation, a spore suspension of F. graminearum was applied to the rice cultivars Dongjin 1 and Nampyeongbyeo before and after the heading stage. The disease incidence rate was the highest (50%) directly after heading, when the greatest number of flowers were present, while only 10% of the rice infected 30 days after heading showed symptoms. To understand the mechanism of infection, an F. graminearum strain expressing green fluorescent protein (GFP) was inoculated, and the resulting infections were visually examined. Spores were found in all areas between the glume and inner seed, with the largest amount of GFP detected in the aleurone layer. When the inner part of the rice seed was infected, the pathogen was mainly observed in the embryo. These results suggest that F. graminearum migrates from the anthers to the ovaries and into the seeds during the flowering stage of rice. This study will contribute to uncovering the infection process of this pathogen in rice.

Inhibition of Fusarium graminearum by silver nanoparticles / 生物工程学报

Silver nanoparticles were prepared by chemical reduction. Fusarium graminearum was used as the test strain. To study the inhibition of F. graminearum by silver nanoparticles, we studied the activities of protective enzymes superoxide dismutase (SOD), peroxidase (POD) and catalase (CAT), and the contents of osmotic adjustment substances soluble protein, soluble sugar and malonaldehyde (MDA) in F. graminearum. Silver nanoparticles inhibited F. graminearum and the inhibitory effect was increased with the concentration of silver nanoparticles. The inhibition rate of 10 μg/mL silver nanoparticles was more than 90% and EC50 was 0.59 μg/mL. When the treating time prolonged (2, 4, 6, 8 and 10 h), the activity of SOD, CAT and POD increased firstly and then declined. SOD, POD and CAT reached the maximum at 4 hours, and decreased to minimum at 10 hours. Silver nanoparticles also increased the MDA content and reduced the soluble sugar and protein contents in pathogens. These results indicated that cell integrity was destroyed in the presence of silver. This may be one of the inhibiting mechanisms of silver nanoparticles on the growth of F. graminearum.

RNA-Seq, and ye shall find: Sexual-stage-specific A-to-I RNA editing in fungi.

Fusarium graminearum, a pathogen of wheat and barley, is a haploid homothallic ascomycete filamentous fungus (Goswami and Kistler 2004). It overwinters as saprophytic hyphae in plant debris and undergoes the sexual cycle in spring to produce fruiting bodies (perithecia) bearing the progeny ascospores. The genome sequence of the F. graminearum PH-1 strain was reported last year (King et al. 2015). This year, Jin-Rong Xu and colleagues in Northwest A&F University, China, and Purdue University, USA, re-sequenced the PH-1 genome and also performed RNA-Seq analysis on two independent biological replicates each of RNA from conidia, hyphae, and 8-day post-fertilization perithecia (Liu et al. 2016). Alignment of the two replicate perithecial RNA-Seq reads with the reference genome sequence revealed 23,041 and 19,764 single-nucleotide variants (SNVs), of which, respectively, 22,578 and 19,261 corresponded to A (adenosine)- to-G (guanosine) transitions, and 17,613 A-to-G transitions were common to both the replicates. Non- A-to-G variants were far fewer (463 and 503) and only 35.9% were common between the two perithecial replicates, suggesting that the non-A-to-G variants were false-positives. In sum, 26,056 A-to-G variants were identified as putative A-to-I RNA editing sites at which hydrolytic deamination at the C6 position of the purine ring of A produces I (inosine). Since I preferentially base-pairs with C (cytidine), an I within a transcript is read as G by the translation machinery. Also, during reverse transcription, I directs the incorporation of C; thus, it appears as a G in double-stranded cDNA. The conidial and hyphal RNA-Seq data showed only 68 and 112 A-to-G transitions and 335 and 452 non-A-to-G conversions, indicating that the A-to-I RNA editing is specific to the sexual stage. Xu and colleagues had initially set out to do a yeast two-hybrid experiment to identify proteins that interact with a protein kinase named Puk1 (perithecium unique kinase 1). Ascospores from the puk1 mutant have an abnormal morphology. Additionally, qRT-PCR showed that PUK1 transcription is markedly upregulated in perithecia, suggesting that PUK1 expression and function might be restricted to the sexual stage. Therefore, to generate the PUK1 ORF bait, they synthesized cDNA using RNA isolated from perithecial cultures of the PH-1 strain. Sequencing of the construct revealed that two tandem stop codons – UAG UAG – in the PUK1 ORF were changed to UGG UGG in the cDNA, presumably via A-to-I RNA editing. More than 90% of PUK1 reads in perithecial RNA-Seq showed the A-to-I editing, and experiments with site-specific mutant alleles showed that the editing was essential for PUK1 function. This was an unexpected discovery because fungi lack orthologs of the Adenosine Deaminase Acting on RNA (ADAR) family of enzymes that in metazoans converts A to I in double-stranded RNA. Presumably, A-to-I RNA editing in fungi uses different enzymes than animals. This discovery motivated Xu and colleagues to expand the search for RNA editing genome-wide in transcriptomes from vegetative and sexual-stage tissues (conidia, hyphae, and perithecia). The percentage of reads with the A-to-G variant was taken as the RNA editing level at the site. Editing levels varied from 3% to 100%. Strikingly, 47% of genes bearing sites with editing levels >60% tended to be up-regulated or specifically expressed in perithecia compared to conidia and hyphae. A majority of the editing events resulted in amino acid substitutions, which suggested that Ato- I editing might be important for adaptation of protein functions during sexual reproduction. Editing events similar to those in PUK1 were found 69 other genes, including the rid (RIP defective) ortholog and genes important for meiosis (see below). All these genes displayed UAG-to-UGG change in exons that automated annotation had incorrectly predicted as introns.

Antimicrobial activity of endophytic fungi isolated from leaf and fruit of Eucommia ulmoides / 中草药

Objective: To isolate endophytic fungi from the leaves and fruits of Eucommia ulmoides and evaluate their antimicrobial activity.Methods: The endophytic fungi from the leaves and fruits of E. ulmoides were isolated by plate culture method, the antimicrobial activity was evaluated by standoff method, and the ability of producing bioactive compounds of E. ulmoides was investigated by HPLC. Results: A total of 52 endophytic fungi were isolated from segments of healthy the leaves and fruits E. ulmoides. Extract of two strains had a retention time identical to that of authentic chlorogenic acid. Eleven out of 52 strains exhibited antimicrobial activity to four or more fungal pathogens. The strain 29 (Alternaria SP.) showed maximum inhibition against Fusarium graminearum, and the radial growth inhibition was 82.6%. These endophytic fungi belonged to genus Alternaria, Niqrospora, and Dothideomycetes compared with the fungal sequence database at GenBank. Conclusion: Plenty of endophytic fungi from the leaves and fruits of E. ulmoides are found and 11 strains have antimicrobial activity. The antimicrobial activity of these endophytic fungi could be exploited in the biotechnological medicine and agricultural industry.

Diversidad genética de aislamientos de Fusarium graminearum sensu lato asociados con la fusariosis de la espiga en trigo de diversas localidades argentinas / Genetic diversity of Fusarium graminearum sensu lato isolates from wheat associated with Fusarium Head Blight in diverse geographic locations of Argentina

La fusariosis de la espiga de trigo es una importante enfermedad para la región pampeana Argentina; Fusarium graminearum es el principal patógeno asociado. Se estudió el polimorfismo del ADN de un conjunto de aislamientos utilizando las técnicas de IGS-RFLP e ISSR. La técnica de IGS-RFLP produjo 41 bandas, 30 de ellas fueron polimórficas. El análisis de los ISSR mostró 87 bandas con 47 bandas polimórficas. La primera de estas metodologías fue más eficiente, ya que detectó mayor promedio polimórfico (59,91%) que la segunda (44,11%). Los valores promedio del contenido de información polimórfica (PIC) fueron 0,211 y 0,129, respectivamente. Se identificaron 20 haplotipos por IGS-RFLP, mientras que el análisis de los ISSR reveló 15 haplotipos. La agrupación de genotipos obtenida en ambos dendrogramas fue diferente. Los grupos genéticos obtenidos por la técnica de IGS-RFLP mostraron una asociación parcial con el origen geográfico. Este es el primer reporte que analiza la variabilidad genética en poblaciones de F. graminearum de trigo empleando marcadores IGS-RFLP e ISSR en Argentina

Fusarium Head Blight is an important wheat disease in the Argentine Pampas region, being Fusarium graminearum the predominant pathogen. DNA polymorphism of the isolates was analyzed by IGS-RFLP and ISSR. IGS-RFLP and ISSR profiling were carried out using six endonucleases and eight primers, respectively. IGS-RFLP yielded 41 bands, 30 of which were polymorphic while ISSR produced 87 bands with 47 polymorphic bands. Both markers showed genetic variability among the analyzed isolates; however, IGS-RFLP was more efficient than ISSR, showing a higher polymorphic average (59.91%) than the latter (44.11%). The averages of polymorphic information content (PIC) were 0.211 and 0.129, respectively. Twenty haplotypes were identified by IGS-RFLP and 15 haplotypes by ISSR. Genotype clustering within dendrograms was different for both types of markers. The genetic groups obtained by IGS-RFLP showed a partial association to geographic origin. This is the first report on genetic variability of F. graminearum isolates from wheat in Argentina using IGS-RFLP and ISSR markers

Assessment of the Pathogenicity Property of Fusarium • raminearum 1 in Balb/C Mice.

An experiment was conducted to investigate the immunologic property, pathogenicity and treatment of Fusarium graminearum infection. Several groups of mice were randomly selected for the following groups: (PC, T1 and T2 were groups of mice that respectively received a 1:1, 1:100 and 1:100,000 fungal dilution while T3, T4, and T5 were groups of mice that respectively received the same concentration but each were treated with Diethylamine Acetarsol (Acetylarsan). A group of mice was included as a negative control (NC),In vitro assays were used to examine the ability of F. graminearum to produce enzymes, which are thought as important virulence indicators. Results revealed the ability of the pathogen to produce collagenase and elastase. In addition, histopathological examination indicated vascular congestion and mild triaditis of the liver. Pulmonary congestion and lymphoid hyperplasia in the spleen were noted. The fungi were recovered from the liver, lungs, spleen and skin of the legs of some experimental animals. Likewise, increase in weight of the spleen doubled as early as the second week (from 49 mg to 80 mg) and progressed up to the fourth week (125 mg) where it tapered off in the untreated group. Similar increase in the weight of the spleen was observed in the treated group (40 mg to 64 mg) but not as great as that in the untreated group (105 mg). Hematological findings showed a lymphocytic count of 1.83 that increased to 3.356, monocyte count of 0.47 that increased to 0.981 and neutrophils increased from 0.399 to 1.698 in untreated groups. Lymphocyte count in the treated group was increased from 1.8 to 3.64, monocytes increased from 0.068 to 0.325 and neutrophils increased from 0.223 to 1.056. High incidence of death was observed in animals that did not receive treatment (PC, T1, and T2) while relatively lower death incidences were exhibited by groups that received diethylamine acetarsol (T3, T4 and T5).

Agressividade diferencial de espécies do complexo Fusarium graminearum em interação com o fungicida tebuconazole na redução do rendimento de trigo / Differential aggressiveness of species of the Fusarium graminearum complex in interaction with tebuconazole fungicide on the reduction of wheat grain yield

No Brasil, a giberela em trigo é causada por espécies do complexo Fusarium graminearum, especialmente F. graminearum sensu stricto (Fgss) e F. meridionale (Fmer), as quais variam quanto ao potencial toxigênico. O objetivo deste trabalho foi avaliar a relação entre características fenotípicas e agressividade dessas duas espécies associadas ao uso do fungicida tebuconazole, da classe dos triazóis, com a redução de rendimento do trigo. Em dez isolados Fgss e nove Fmer, foram avaliados: esporulação total, taxa de germinação e sensibilidade ao fungicida tebuconazole. A inoculação, para cada isolado, foi feita por aspersão em espigas e as variáveis severidade da doença, incidência de grãos giberelados e o peso de grãos foram avaliados. O efeito de tebuconazole na redução da doença foi avaliado em ação protetora, seguida de inoculação na espigueta central de plantas da cultivar 'BRS Guamirim', com os seguintes tipos de inóculo: somente Fgss, somente Fmer ou a mistura de ambos (1:1). Isolados Fgss apresentaram maior esporulação total, maior taxa de germinação e foram menos sensíveis ao tebuconazole em comparação a Fmer. Grãos giberelados por isolados Fmer apresentaram 50% maior peso do que aqueles provenientes de inoculações com Fgss. O tebuconazole apresentou efeito fungistático e os grãos de espigas tratadas com o fungicida apresentaram peso 25% superior aos não tratados. Sugere-se que diferenças no potencial de dano aos grãos pelas duas espécies, assim como o efeito fungistático de triazóis, podem ajudar a explicar a co-ocorrência de diferentes micotoxinas, o que ainda necessita ser confirmado com dados de campo.

Fusarium head blight of wheat in Brazil is caused mainly by two species of the Fusarium graminearum species complex: F. graminearum sensu stricto (Fgss) and F. meridionale (Fmer), which vary in relation to toxigenic potential. The aim of this study was to evaluate the effect of phenotypic traits and aggressiveness of these two species, associated with the tebuconazole fungicide, of the triazole group, on the reduction of wheat yield. Ten Fgss strains and Fmer strains were evaluated with regards to: total sporulation, germination rate and tebuconazole sensitivity. The strains were spray-inoculated onto BRS Guamirim cv. 'plants' at full flowering and disease severity, Fusarium-damaged kernels, and kernel weight were evaluated. The effect of tebuconazole in disease control was evaluated through spraying the fungicide and then inoculating the central-floret of the wheat head with the following inoculum treatments: a mixture of all Fgss strains, a mixture of all Fmer strains or a mixture of all isolates of both species (1:1). Strains of Fgss showed higher total sporulation and germination rates and were less sensitivity to tebuconazole. The weight of Fusarium-damaged kernels from inoculations with Fmer strains was 50% higher than those inoculated with Fgss. A fungistatic effect on the disease was found for tebuconazole application and harvested kernels showed 25% higher grain weight than the untreated kernels. It is suggested that the distinct yield loss potential by these two species, in association with the fungistatic effect of triazoles could explain the co-occurrence of different mycotoxins in the harvested kernels, which needs to be proven with field data.

Fusarium species and fumonisins associated with maize kernels produced in Rio Grande do Sul State for the 2008/09 and 2009/10 growing seasons

Ear rots caused by Fusarium spp. are among the main fungal diseases that contribute to poor quality and the contamination of maize grains with mycotoxins. This study aimed to determine the visual incidence of fungal-damaged kernels (FDKs), the incidence of two main Gibberella (a teleomorph of Fusarium) complexes (G. fujikuroi and G. zeae) associated with maize using a seed health blotter test, and the fumonisin levels, using high performance liquid chromatography, in samples of maize grains grown across 23 municipalities during the 2008/09 and 2009/10 growing seasons. Additionally, 104 strains that were representative of all of the analysed samples were identified to species using PCR assays. The mean FDK was seven per cent, and only six of the samples had levels greater than six per cent. Fusarium spp. of the G. fujikuroi complex were present in 96% of the samples, and G. zeae was present in 18% of the samples (5/27). The mean incidence of G. fujikuroi was 58%, and the incidence of G. zeae varied from 2 to 6%. FB1 was found in 58.6%, FB2 in 37.9%, and both toxins in 37.9% of the samples. The FB1 and FB2 levels were below the quantification limits for 41.3% of the samples, and the mean FB1 levels (0.66 µg/g) were higher than the mean FB2 levels (0.42 µg/g). The PCR identification separated the 104 isolates into three of the G. fujikuroi complex: F. verticillioides (76%), F. subglutinans (4%) and F. proliferatum (2%); and G. zeae (anamorph = F. graminearum) (18%). Our results confirmed the dominance of F. verticillioides, similar to other regions of Brazil, but they differed due to the relatively higher incidence of F. graminearum. Total fumonisin levels were below the maximum limit determined by current Brazilian regulations.

Toxigenic potential of Fusarium graminearum isolated from maize of northwest Argentina

Twenty six isolates of Fusarium graminearum from grains of maize hybrids harvested in ±west Argentina were grown on autoclaved rice grain to assess their ability to produce type B trichothecenes. Chemical analysis indicated that 38% of isolates were nivalenol (NIV) producers only, 31% were major NIV producers with high DON(deoxynivalenol)/NIV ratios, 8% were major DON producers with minor NIV production, and 23% were DON producers only. Isolates showed a high variability in their toxigenic potential which was not related to fungal biomass. The distribution of the different chemotypes as well as the high and the low trichothecene-producing Fusarium isolates could not be associated to a geographical origin. Our results confirmed for the first time that isolates of Fusarium graminearum from maize of northwest Argentina are able to produce DON and NIV. A substancial contamination with both NIV and DON is likely in maize from northwest Argentina. Their contents should be quantified in regional surveillances for mycotoxin contamination.

The neem [Azadirachta indica a: juss (meliaceae)] oil reduction in the in vitro production of zearalenone by Fusarium graminearum

Zearalenone, a mycotoxin produced by fungi of the genus Fusarium, including F. graminearum, triggers reproduction disorders in certain animals and hyperestrogen syndromes in humans. Current research investigates three concentrations of neem oil extract (0.1, 0.25 and 0.5 percent) in reducing the production of zearalenone. Neem oil extract decreased zearalenone amount in the three concentrations but highest inhibition (59.05 percent) occurred at 0.1 percent.

Extracellular enzymes of Fusarium graminearum isolates

Fusarium graminearum isolates from three different agroecological regions in Argentina were examined according to the production of different extracellular enzyme activities of potential biotechnological interest: pectinases (PGase: polygalacturonase and PMGase: polymethylgalacturonase), cellulase (CMCase: carboxymethylcellulase) and hemicellulase (xylanase). The isolates were grown in minimum salt medium supplemented with 0.25 percent glucose, 0.125 percent citric pectin and 0.125 percent oat bran as carbon sources and/or enzyme inducers. PGase activity was detected early (after two days of incubation) in all the cultures; it was found to be the highest for all the isolates. PMGase was high only for those isolates of the II region. CMCase and endoxylanase activities were particularly found at late stages (after four and seven days of incubation, respectively) and the maximum values were lower than pectinase activities.

A new PCR approach for the identification of Fusarium graminearum / Um novo protocolo de PCR para a identificação de Fusarium graminearum

The main objective of this work was to develop a PCR protocol for the identification of Fusarium graminearum, based on a pair of primers targeted to a segment of the 3' coding region of the gaoA gene that codes for the enzyme galactose oxidase (GO). This region has low homology with the same region of GO genes from other fungi. Genomic DNA from 17 strains of Fusarium spp. isolated from diseased cereals, from several other Fusarium species, and from other fungi genera was analyzed in a PCR assay using this primer set. The 17 strains of Fusarium spp. were also analyzed for the GO enzyme production in submerse fermentation in a new formulated liquid medium. All strains that were morphologically and molecularly identified as F. graminearum were able to secrete the enzyme and had a positive result in the used PCR protocol. No DNA fragment was amplified using genomic DNA from other Fusarium species and species of other fungi genera. The results suggest that the proposed PCR protocol is specific and can be considered as a new molecular tool for the identification of F. graminearum. In addition, the new formulated medium is a cheap alternative for screening for GO screening production by F. graminearum.

O principal objetivo deste trabalho foi desenvolver um novo protocolo de PCR para identificação de isolados de Fusarium graminearum, baseado no uso de um par de iniciadores direcionado para um segmento da região 3' codificadora do gene gaoA que codifica a enzima galactose oxidase (GO). Esta região possui baixa homologia com a mesma região de genes da GO de outros fungos. O DNA genômico de 17 cepas de Fusarium spp. isoladas de cereais infectados com sintomas, de vários outras espécies de Fusarium e de outros gêneros de fungos foi analisado em um protocolo de PCR utilizando os iniciadores desenhados. Os 17 isolados de Fusarium spp. também foram analisados para a produção da enzima GO em fermentação submersa em um novo meio líquido. Todas as cepas que foram morfologicamente e molecularmente identificadas como F. graminearum foram capazes de secretar a enzima e tiveram um resultado positivo no protocolo de PCR, utilizando os iniciadores direcionados para o gene gaoA. Nenhum fragmento de DNA foi amplificado quando foi utilizado o DNA genômico de várias outras espécies de Fusarium e de espécies de outros gêneros de fungos. Os resultados sugerem que o protocolo de PCR gerado é específico e pode ser considerado como uma nova ferramenta molecular para a identificação de cepas de F. graminearum. Além disso, o meio líquido formulado é uma alternativa barata para a avaliação da produção de GO por F. graminearum.

Vegetative compatibility and molecular characterization of Fusarium graminearum isolates from the State of Paraná, Brazil

Fusarium graminearum isolates causing Fusarium head blight in wheat were collected in Brazil and analyzed by random amplified polymorphic DNA (RAPD) markers and vegetative compatibility grouping (VCG). Nitrate non-utilizing mutants (nit) from each isolate were paired to verify heterokaryon formation. Three VCGs were identified among F. graminearum isolates: VCG1 included F-2, F-3 and F-4 isolates; VCG2 included F-1, F-6 and F-9 isolates; VCG3 included F-5, F-7 and F-8 isolates. Based on PCR amplification with eight different primers, the isolates showed great genetic similarity among themselves. Dendrogram analysis demonstrated two RAPD groups: Group A, consisting of isolates F-2 and F-9, and Group B, composed of the remaining isolates. Results suggest the clonal origin of F. graminearum isolates.

Isolados de Fusarium graminearum, obtidos de espigas de trigo com sintomas de Giberela, foram analisados pela técnica do Polimorfismo de DNA Amplificado ao Acaso (RAPD) e pelos Grupos de Compatibilidade Vegetativa (GCV). Mutantes auxotróficos (nit) de cada isolado foram pareados em todas as combinações possíveis, para a formação de heterocários. Três GCVs foram identificados: GCV1, incluindo os isolados F-2, F-3 e F-4; GCV2, incluindo os isolados F-1, F-6 e F-9; e GCV3, formado pelos isolados F-5, F-7 e F-8. Dois grupos foram identificados com base nos marcadores de RAPD: o grupo A, formado pelos isolados F-2 e F-9, e o grupo B, composto pelos demais isolados, os quais apresentaram grande similaridade entre si. Os resultados sugerem a origem clonal dos isolados de F. graminearum analisados.