ABSTRACT
The aim of this study was to determine IS6110 banding pattern of Mycobacterium tuberculosis [MTB] isolates for evaluation of tuberculosis [TB] transmission. These isolates were obtained from intermediate laboratories of six major provinces of Iran; East Azarbaijan, West Azarbaijan, Khorasan, Kerman, Kermanshah and Fars. Restriction fragment length polymorphism [RFLP] was performed on 100 suitable isolates, which have been obtained from some laboratories thought Iran. Fingerprinting was done using the oligonucleotide 6110 a' [5 = -GTGAGGGCATCGAGGTGGC] and 6110 b = [5 = -GCGTAGGCGTCGGTGACAAA] primers. We observed two types of banding patterns among the typed strains: sixty-two% of MTB strains had a high copy number of IS6110, whereas 33% had a low copy number. In addition, five MTB strains [5%] without any IS6110 banding pattern were detected. The analysis of banding pattern in MTB isolates revealed heterogeneous DNA fingerprinting. The computer-assisted dendogram system demonstrated 8% to 51% similarity among typed strains. According to the available data, similarity between 90% and 100% is considered as homogeneous DNA fingerprinting. Since two banding patterns [low and high] have been detected, it could be suggested that two or more lineage for TB strains might exist in Iran, which requires further analysis. This study also suggests that in these cases, tuberculosis is characterized by the absence of obvious focuses of transmission
Subject(s)
Mycobacterium tuberculosis/genetics , Polymorphism, Restriction Fragment Length , Oligonucleotides/biosynthesis , Hybridization, Genetic , Polymerase Chain Reaction , DNA ProbesABSTRACT
Trypanosoma cruzi, causador da tripanossomíase americana, é um microrganismo exposto a uma variedade de espécies reativas de oxigênio, geradas como conseqüência do metabolismo de drogas tripanocidas, ou pelo hospedeiro como resposta fisiológica à invasão, além daqueles produzidos internamente em conseqüência dos processos oxidativos do parasita. Em qualquer circunstância, as células precisam proteger-se contra os produtos da redução parcial do oxigênio. Os tripanossomatídeos são aparentemente deficientes na defesa antioxidante. Embora possuindo uma superóxido dismutase, carecem de glutationa peroxidase e catalase, que são necessárias para a remoção do peróxido de hidrogênio. Além disso, glutationa, o maior composto sulfidrílico antioxidante em células de mamíferos, está presente em baixas concentrações nos tripanossomatídeos...
Subject(s)
Antibodies, Protozoan , Cloning, Molecular , Crithidia fasciculata , Glutathione Peroxidase/deficiency , Oligonucleotides/biosynthesis , Superoxide Dismutase , Trypanosoma cruzi/immunology , Blotting, Western , Cell Culture Techniques , Electrophoresis, Polyacrylamide Gel , Fluorescent Antibody TechniqueABSTRACT
Using synthetic peptides and a combinatorial library of 56 mer random oligonucleotides, we have developed reagents that behave as "synthetic antibodies". The results obtained with the protein phosphatase 2A as a model system are shown here. The specificity of these reagents, named "oligobodies", has been demonstrated by Western blot analysis and immunohistochemistry. The oligobodies have enormous advantages compared to antibodies: their production is independent of the immune system, they can be prepared in a few days and there is no need for a purified target protein. These reagents can be produced even if the corresponding protein was never isolated or purified, since only a partial DNA suquence from a database provides enough information to make them.