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1.
World J Gastroenterol ; 26(25): 3611-3624, 2020 Jul 07.
Article in English | MEDLINE | ID: mdl-32742130

ABSTRACT

BACKGROUND: The etiology of inflammatory bowel disease (IBD) is unknown, but it is believed to be multifactorial. The hygiene hypothesis proposes that better hygiene conditions would lead to less infectious disease during childhood and favor the development of immune-mediated diseases. AIM: To test the hygiene hypothesis in IBD by assessing the environmental risk factors associated with IBD development in different regions of Brazil with diverse socioeconomic development indices. METHODS: A multicenter case-control study was carried out with 548 Crohn's disease (CD) and 492 ulcerative colitis (UC) outpatients and 416 healthy controls, from six IBD centers within different Brazilian states at diverse socioeconomic development stages. A semi-structured questionnaire with 87 socioeconomic and environmental questions was applied. Logistic regression model was created to assess the odds ratio (OR) with P value and 95% confidence intervals (CI). RESULTS: Predictive variables for both diseases (CD and UC) were women [odd ratios (OR) = 1.31; OR = 1.69], low monthly family income (OR = 1.78; OR = 1.57), lower number of cohabitants (OR = 1.70; OR = 1.60), absence of vaccination (OR = 3.11; OR = 2.51), previous history of bowel infections (OR = 1.78; OR = 1.49), and family history of IBD (OR = 5.26; OR = 3.33). Associated risk factors for CD were age (18-39 years) (OR = 1.73), higher educational level (OR = 2.22), absence of infectious childhood diseases (OR = 1.99). The UC predictive variables were living in an urban area (OR = 1.62), inadequate living conditions (OR = 1.48) and former smokers (OR = 3.36). Appendectomy was a risk factor for CD (OR = 1.58) with inverse association with UC (OR = 4.79). Consumption of treated and untreated water was associated with risk of CD (OR = 1.38) and UC (OR = 1.53), respectively. CONCLUSION: This is the first examining environmental exposures as risk factors for inflammatory bowel disease in Brazil. Most of the variables associated with disease risk support the role of the hygiene hypothesis in IBD development.


Subject(s)
Colitis, Ulcerative , Inflammatory Bowel Diseases , Adolescent , Adult , Brazil/epidemiology , Case-Control Studies , Colitis, Ulcerative/diagnosis , Colitis, Ulcerative/epidemiology , Female , Humans , Male , Risk Factors , Young Adult
2.
World J Gastroenterol ; 23(30): 5549-5556, 2017 Aug 14.
Article in English | MEDLINE | ID: mdl-28852314

ABSTRACT

AIM: To identify environmental risk factors associated with the development of Crohn's disease (CD) in order to re-assess the hygiene hypothesis. METHODS: A hospital-based, case-control study was carried out with CD patients (n = 145) and controls (n = 163) representing a socioeconomically diverse statewide catchment area in Brazil. Controls were recruited from caregivers of patients seen in different outpatient clinics at the same hospital. A multi-item survey with 94 questions regarding family history of CD, perinatal and childhood circumstances, living conditions, tobacco use and familial socioeconomic status was carried out by interviewers. RESULTS: On the univariate analysis, predictive variables for CD included being male, under age of 40, a high education level, urban dweller, smaller family size, exposure to enteric pathogens and user of treated water (P < 0.005). On the multivariate analysis, variables significantly associated with CD were male gender (OR = 2.09), under age 40 (OR = 3.10), white (OR = 2.32), from a small family in childhood (OR = 2.34) and adulthood (OR = 3.02), absence of viral infections in childhood (OR = 2.23), exposure to enteric pathogens (OR = 2.41), having had an appendectomy (OR = 2.47) and prior or current smoker (OR = 2.83/1.12). CONCLUSION: Most variables supporting the "hygiene hypothesis" are associated with the development of CD but are not independent predictors of the diagnosis.


Subject(s)
Crohn Disease/epidemiology , Crohn Disease/immunology , Environmental Exposure/adverse effects , Hygiene Hypothesis , Smoking/adverse effects , Adult , Age Factors , Aged , Aged, 80 and over , Appendectomy/adverse effects , Brazil/epidemiology , Case-Control Studies , Female , Humans , Male , Middle Aged , Multivariate Analysis , Risk Factors , Sex Factors , Social Class , Surveys and Questionnaires , Young Adult
3.
Braz. j. infect. dis ; 21(3): 317-324, May-June 2017. tab, graf
Article in English | LILACS | ID: biblio-839213

ABSTRACT

ABSTRACT Introduction: The Mycobacterium tuberculosis East African-Indian (EAI) spoligotyping family (belonging to lineage 1, Indo-Oceanic, defined by the region of deletion RD239) is distributed worldwide, but is more prevalent in Southeast Asia, India, and East Africa. Studies in Latin America have rarely identified EAI. In this study, we describe the occurrence of the EAI family in Brazil. Methods: EAI was identified in a systematic literature review of genetic diversity studies pertaining to M. tuberculosis in Brazil, as well as in a survey conducted in Salvador, Bahia, located in the northeastern region of this country. Results: The EAI6-BGD1 spoligotyping family and the EAI5 Spoligotype International Type (SIT) 1983 clade were the most frequently reported, with wide distribution of this particular clade described in Brazil. The distribution of other EAI spoligotyping patterns with broader worldwide distribution was restricted to the southeastern region of the country. Conclusions: EAI may be endemic at a low frequency in Brazil, with some clades indicating increased fitness with respect to this population.


Subject(s)
DNA, Bacterial/genetics , Bacterial Typing Techniques , Mycobacterium tuberculosis/genetics , Brazil , Phylogeography , Genotype , Mycobacterium tuberculosis/classification
4.
Braz J Infect Dis ; 21(3): 317-324, 2017.
Article in English | MEDLINE | ID: mdl-28238627

ABSTRACT

INTRODUCTION: The Mycobacterium tuberculosis East African-Indian (EAI) spoligotyping family (belonging to lineage 1, Indo-Oceanic, defined by the region of deletion RD239) is distributed worldwide, but is more prevalent in Southeast Asia, India, and East Africa. Studies in Latin America have rarely identified EAI. In this study, we describe the occurrence of the EAI family in Brazil. METHODS: EAI was identified in a systematic literature review of genetic diversity studies pertaining to M. tuberculosis in Brazil, as well as in a survey conducted in Salvador, Bahia, located in the northeastern region of this country. RESULTS: The EAI6-BGD1 spoligotyping family and the EAI5 Spoligotype International Type (SIT) 1983 clade were the most frequently reported, with wide distribution of this particular clade described in Brazil. The distribution of other EAI spoligotyping patterns with broader worldwide distribution was restricted to the southeastern region of the country. CONCLUSIONS: EAI may be endemic at a low frequency in Brazil, with some clades indicating increased fitness with respect to this population.


Subject(s)
Bacterial Typing Techniques , DNA, Bacterial/genetics , Mycobacterium tuberculosis/genetics , Brazil , Genotype , Mycobacterium tuberculosis/classification , Phylogeography
5.
PLoS One ; 9(10): e107747, 2014.
Article in English | MEDLINE | ID: mdl-25314118

ABSTRACT

Rio de Janeiro is endemic for tuberculosis (TB) and presents the second largest prevalence of the disease in Brazil. Here, we present the bacterial population structure of 218 isolates of Mycobacterium tuberculosis, derived from 186 patients that were diagnosed between January 2008 and December 2009. Genotypes were generated by means of spoligotyping, 24 MIRU-VNTR typing and presence of fbpC103, RDRio and RD174. The results confirmed earlier data that predominant genotypes in Rio de Janeiro are those of the Euro American Lineages (99%). However, we observed differences between the classification by spoligotyping when comparing to that of 24 MIRU-VNTR typing, being respectively 43.6% vs. 62.4% of LAM, 34.9% vs. 9.6% of T and 18.3% vs. 21.5% of Haarlem. Among isolates classified as LAM by MIRU typing, 28.0% did not present the characteristic spoligotype profile with absence of spacers 21 to 24 and 32 to 36 and we designated these conveniently as "LAM-like", 79.3% of these presenting the LAM-specific SNP fbpC103. The frequency of RDRio and RD174 in the LAM strains, as defined both by spoligotyping and 24 MIRU-VNTR loci, were respectively 11% and 15.4%, demonstrating that RD174 is not always a marker for LAM/RDRio strains. We conclude that, although spoligotyping alone is a tool for classification of strains of the Euro-American lineage, when combined with MIRU-VNTRs, SNPs and RD typing, it leads to a much better understanding of the bacterial population structure and phylogenetic relationships among strains of M. tuberculosis in regions with high incidence of TB.


Subject(s)
Minisatellite Repeats/genetics , Mycobacterium tuberculosis/genetics , Polymorphism, Single Nucleotide , Tuberculosis/microbiology , Alleles , Bacterial Proteins/genetics , Brazil , Gene Frequency , Genotype , Humans , Mycobacterium tuberculosis/classification , Mycobacterium tuberculosis/isolation & purification , Phylogeny
6.
Article in English | MEDLINE | ID: mdl-24904240

ABSTRACT

BACKGROUND: There are controversies regarding the accuracy of the tuberculin skin test (TST) and methods based on the production of interferon gamma by sensitized T cells for the diagnosis of latent tuberculosis infection (LTBI) in pediatrics and immunosuppressed patients. Our objectives are to study TST and ELISPOT/T. SPOT.TB in the diagnosis of LTBI in children and adolescents with JIA undergoing methotrexate, the correlation between both and the sensitivity and specificity of T. SPOT.TB. METHODS: This is an observational prospective longitudinal study in which children and adolescents with JIA undergoing methotrexate therapy were assessed for clinical and epidemiological data for LTBI, in addition to performing TST and T. SPOT.TB at baseline and after 3 and 12months. RESULTS: There were 24 patients. The prevalence of LTBI at inclusion was 20.8%, the incidence after initiation of immunosuppressions 26.3% and the prevalence at the end of the study 41.6%. Epidemiological history positive for TB showed a relative risk of 2.0 for the development of LTBI. Only 2 patients had positive T. SPOT.TB but only in one it was useful for detecting early LTBI. T. SPOT.TB presented a sensitivity of 10%, specificity of 92.8%, and low correlation with TST. No patient developed TB disease at a mean follow-up of 47months. CONCLUSIONS: We found a high prevalence of ILTB that doubled with immunosuppression and that epidemiological history was an important relative risk. T. SPOT.TB showed low sensitivity and high specificity, and no superiority over TST. There was low agreement and little influence of immunosuppression on the results of both tests.


Subject(s)
Arthritis, Juvenile , Enzyme-Linked Immunospot Assay/methods , Latent Tuberculosis , Methotrexate , Mycobacterium tuberculosis/isolation & purification , Tuberculin Test/methods , Adolescent , Arthritis, Juvenile/drug therapy , Arthritis, Juvenile/epidemiology , Arthritis, Juvenile/immunology , Brazil/epidemiology , Child , Female , Humans , Immunocompromised Host/immunology , Immunosuppressive Agents/administration & dosage , Immunosuppressive Agents/adverse effects , Latent Tuberculosis/diagnosis , Latent Tuberculosis/epidemiology , Latent Tuberculosis/etiology , Longitudinal Studies , Male , Methotrexate/administration & dosage , Methotrexate/adverse effects , Prevalence , Prospective Studies , Reproducibility of Results , Sensitivity and Specificity
7.
Infect Genet Evol ; 18: 238-46, 2013 Aug.
Article in English | MEDLINE | ID: mdl-23648425

ABSTRACT

Human tuberculosis is an infectious disease caused by bacteria from the Mycobacterium tuberculosis complex (MTBC). Although spoligotyping and MIRU-VNTR are standard methodologies in MTBC genetic epidemiology, recent studies suggest that Single Nucleotide Polymorphisms (SNP) are advantageous in phylogenetics and strain group/lineages identification. In this work we use a set of 79 SNPs to characterize 1987 MTBC isolates from Portugal and 141 from Northeast Brazil. All Brazilian samples were further characterized using spolygotyping. Phylogenetic analysis against a reference set revealed that about 95% of the isolates in both populations are singly attributed to bacterial lineage 4. Within this lineage, the most frequent strain groups in both Portugal and Brazil are LAM, followed by Haarlem and X. Contrary to these groups, strain group T showed a very different prevalence between Portugal (10%) and Brazil (1.5%). Spoligotype identification shows about 10% of mis-matches compared to the use of SNPs and a little more than 1% of strains unidentifiability. The mis-matches are observed in the most represented groups of our sample set (i.e., LAM and Haarlem) in almost the same proportion. Besides being more accurate in identifying strain groups/lineages, SNP-typing can also provide phylogenetic relationships between strain groups/lineages and, thus, indicate cases showing phylogenetic incongruence. Overall, the use of SNP-typing revealed striking similarities between MTBC populations from Portugal and Brazil.


Subject(s)
Mycobacterium tuberculosis/genetics , Tuberculosis/epidemiology , Tuberculosis/microbiology , Brazil/epidemiology , Cluster Analysis , DNA, Bacterial/genetics , DNA, Intergenic/genetics , Humans , Molecular Epidemiology , Molecular Typing , Mycobacterium tuberculosis/classification , Phylogeny , Polymorphism, Single Nucleotide , Portugal/epidemiology
8.
Tuberculosis (Edinb) ; 92(3): 218-25, 2012 May.
Article in English | MEDLINE | ID: mdl-22391089

ABSTRACT

BACKGROUND: The existence of ectosome-like microvesicles released by neutrophils was proposed a few decades ago. Other studies revealed that the innate immune response during mycobacterial infection is accompanied by an intense migration of neutrophils to the site of infection, which may be important during the acute phase of tuberculosis. We found that the ectosomes derived from infected neutrophils are biologically active and can influence the survival of Mycobacterium tuberculosis within macrophages. METHODS: Mycobacteria were cultured on supplemented Middlebrook-7H9 broth. All strains were grown to the exponential phase and quantitated by serial dilution. Human neutrophils and macrophages were infected with mycobacteria. Ectosomes from neutrophils were isolated post-infection and characterized by transmission electron microscopy and flow cytometry. To determine whether these microvesicles influenced mycobactericidal activity, mycobacteria-infected macrophages were treated with isolated ectosomes. RESULTS: Ectosomes were released from neutrophils infected with mycobacteria. These ectosomes were derived from neutrophil plasma membrane and a small proportion stained with PKH26. These microvesicles, when incubated with infected macrophages, influenced antimycobacterial activity. CONCLUSIONS: This is the first study to demonstrate that ectosomes that are shed from infected neutrophils influence mycobactericidal activity in macrophages in vitro, suggesting that these microvesicles have biological significance. Nevertheless, major gaps in our knowledge of microvesicle biology remain.


Subject(s)
Cell-Derived Microparticles/immunology , Macrophage Activation/immunology , Mycobacterium tuberculosis/immunology , Neutrophils/immunology , Tuberculosis/immunology , Cell Communication/immunology , Cell-Derived Microparticles/ultrastructure , Cells, Cultured , Fluorescent Dyes , Humans , Macrophages/immunology , Macrophages/microbiology , Microscopy, Electron , Neutrophils/microbiology , Neutrophils/ultrastructure , Organic Chemicals
9.
J Bras Pneumol ; 37(5): 664-8, 2011.
Article in English, Portuguese | MEDLINE | ID: mdl-22042400

ABSTRACT

In 2005 and 2006, 8,121 clinical specimens submitted to the Mycobacteriology Laboratory of the Clementino Fraga Filho University Hospital/Thoracic Diseases Institute, in the city of Rio de Janeiro, Brazil, were inoculated on Löwenstein-Jensen medium containing glycerol and pyruvate. There were 79 mycobacteria isolates that presented growth only on pyruvate-containing medium, and those isolates were selected for the presumptive identification of Mycobacterium bovis. The selected isolates were screened with biochemical tests, PCR amplification (with the specific primers Rv0577 and Rv1510), and pyrazinamide susceptibility tests. All of the strains isolated showed specific phenotypical and genotypical patterns characteristic of M. tuberculosis, and no M. bovis strains were detected.


Subject(s)
Mycobacterium bovis/growth & development , Mycobacterium tuberculosis/isolation & purification , Tuberculosis/microbiology , Bacteriological Techniques/methods , Brazil/epidemiology , Culture Media/chemistry , Hospitals, University , Humans , Mycobacterium tuberculosis/classification , Tuberculosis/epidemiology
10.
J. bras. pneumol ; 37(5): 664-668, set.-out. 2011. tab
Article in Portuguese | LILACS | ID: lil-604395

ABSTRACT

Entre 2005 e 2006, 8.121 espécimes clínicos enviados ao Laboratório de Micobactérias do Hospital Universitário Clementino Fraga Filho/Instituto de Doenças do Tórax, no Rio de Janeiro, RJ, foram inoculados em meio Löwenstein-Jensen contendo glicerol e piruvato. Desses espécimes, 79 isolados de micobactérias tiveram crescimento somente em meio com piruvato, sendo selecionados para a identificação presuntiva de Mycobacterium bovis. Esses isolados foram submetidos à identificação por testes bioquímicos, amplificação por PCR com primers específicos (Rv0577 e Rv1510) e teste de suscetibilidade à pirazinamida. Todas as cepas apresentaram padrões fenotípicos e genotípicos de M. tuberculosis, não sendo detectado M. bovis.


In 2005 and 2006, 8,121 clinical specimens submitted to the Mycobacteriology Laboratory of the Clementino Fraga Filho University Hospital/Thoracic Diseases Institute, in the city of Rio de Janeiro, Brazil, were inoculated on Löwenstein-Jensen medium containing glycerol and pyruvate. There were 79 mycobacteria isolates that presented growth only on pyruvate-containing medium, and those isolates were selected for the presumptive identification of Mycobacterium bovis. The selected isolates were screened with biochemical tests, PCR amplification (with the specific primers Rv0577 and Rv1510), and pyrazinamide susceptibility tests. All of the strains isolated showed specific phenotypical and genotypical patterns characteristic of M. tuberculosis, and no M. bovis strains were detected.


Subject(s)
Humans , Mycobacterium bovis/growth & development , Mycobacterium tuberculosis/isolation & purification , Tuberculosis/microbiology , Bacteriological Techniques/methods , Brazil/epidemiology , Culture Media/chemistry , Hospitals, University , Mycobacterium tuberculosis/classification , Tuberculosis/epidemiology
11.
J Med Microbiol ; 60(Pt 10): 1441-1446, 2011 Oct.
Article in English | MEDLINE | ID: mdl-21596907

ABSTRACT

We performed genotyping of Mycobacterium leprae present in skin biopsy samples that were collected during the first and the second disease occurrences from eight leprosy patients, seven of whom were diagnosed as suffering from disease relapse. Sequence analysis of part of the M. leprae rpoB, folP1, gyrB and gyrA genes did not show genetic change that supported the presence of drug-resistant bacilli. However, we observed a synonymous nucleotide change at position 297 of gyrA among five of these patients, one presenting C to T (CgyrAT) and four presenting T to C (TgyrAC) at this position. Additional genotyping by analysis of the four short tandem repeats GAA, GTA9, AT17 and TA18 showed that the gyrA single nucleotide polymorphism change was accompanied by a change in short tandem repeat genotype. Our data suggest that leprosy relapse in these patients, living in an area endemic for leprosy, could be caused by M. leprae with a genotype different from the one that caused initial disease.


Subject(s)
Leprosy/epidemiology , Leprosy/microbiology , Molecular Typing , Mycobacterium leprae/classification , Mycobacterium leprae/genetics , Adult , Aged , Bacterial Proteins/genetics , Biopsy , Brazil/epidemiology , Female , Genotype , Humans , Male , Middle Aged , Mycobacterium leprae/isolation & purification , Recurrence , Repetitive Sequences, Nucleic Acid , Sequence Analysis, DNA , Skin/microbiology
12.
Tuberculosis (Edinb) ; 91(1): 14-21, 2011 Jan.
Article in English | MEDLINE | ID: mdl-21106441

ABSTRACT

The contribution of Mycobacterium bovis to the global burden of tuberculosis (TB) in man is likely to be underestimated due to its dysgonic growth characteristics and because of the absence of pyruvate in most used media is disadvantageous for its primary isolation. In Brazil Mycobacterium culture, identification and susceptibility tests are performed only in TB reference centers, usually for selected cases. Moreover, solid, egg-based, glycerol-containing (without pyruvate supplementation) Löwenstein-Jensen (L-J) or Ogawa media are routinely used, unfavouring M. bovis isolation. To determine the importance of M. bovis as a public health threat in Brazil we investigated 3046 suspected TB patients inoculating their clinical samples onto routine L-J and L-J pyruvate enriched media. A total of 1796 specimens were culture positive for Mycobacterium spp. and 702 TB cases were confirmed. Surprisingly we did not detect one single case of M. bovis in the resulting collection of 1674 isolates recovered from M. bovis favourable medium analyzed by conventional and molecular speciation methods. Also, bacillary DNA present on 454 sputum smears from 223 TB patients were OxyR genotyped and none was recognized as M. bovis. Our data indicate that M. bovis importance on the burden of human TB in Brazil is marginal.


Subject(s)
Dairy Products/microbiology , Mycobacterium bovis/isolation & purification , Tuberculosis/epidemiology , Animals , Brazil/epidemiology , Clinical Laboratory Techniques , Dairy Products/adverse effects , Genotype , Humans , Incidence , Mycobacterium bovis/genetics , Population Surveillance , Risk Factors , Tuberculosis/genetics , Tuberculosis/transmission
13.
J Pediatr (Rio J) ; 85(3): 183-93, 2009.
Article in English, Portuguese | MEDLINE | ID: mdl-19492166

ABSTRACT

OBJECTIVES: To present an updated review concerning new assays for diagnosing tuberculosis based on in vitro interferon-gamma production by host T cells, and compare them with tuberculin skin test. METHODS: A literature review was carried out based on Medline and LILACS databases (2000-2008) searching for the following keywords: tuberculosis, interferon-gamma, quantiFERON, ELISPOT and T-SPOT.TB. RESULTS: These new assays proved to have, in general, equal or superior sensitivity and specificity than the tuberculin skin test not only in adults but also in children and immunosuppressed patients for the diagnosis of both latent tuberculosis infection or active disease, with some advantages such as less cross-reactivity as a result of previous BCG vaccination, less influence of anergy and better accuracy in small children. In the United States, these assays have been used instead of the tuberculin skin test and, although still very expensive, the World Health Organization will be making its economic viability a priority. CONCLUSIONS: Always having in mind the importance of clinical and epidemiological histories, these new assays based on interferon-gamma release present promising results and should be considered in tuberculosis investigation procedures for all patients, however with a special concern in the risk groups (i.e., children and immunosuppressed patients).


Subject(s)
Enzyme-Linked Immunosorbent Assay/methods , Interferon-gamma/biosynthesis , T-Lymphocytes/immunology , Tuberculosis/diagnosis , Child , Humans , Interferon-gamma/blood , Sensitivity and Specificity , Tuberculin Test/methods
14.
J Immunol ; 183(1): 718-31, 2009 Jul 01.
Article in English | MEDLINE | ID: mdl-19535630

ABSTRACT

Immune mediators associated with human tuberculosis (TB) remain poorly defined. This study quantified levels of lung immune mediator gene expression at the time of diagnosis and during anti-TB treatment using cells obtained by induced sputum. Upon comparison to patients with other infectious lung diseases and volunteers, active pulmonary TB cases expressed significantly higher levels of mediators that counteract Th1-type and innate immunity. Despite the concomitant heightened levels of Th1-type mediators, immune activation may be rendered ineffectual by high levels of intracellular (SOCS and IRAK-M) and extracellular (IL-10 and TGF-betaRII, IL-1Rn, and IDO) immune suppressive mediators. These modulators are a direct response to Mycobacterium tuberculosis as, by day 30 of anti-TB treatment, many suppressive factors declined to that of controls whereas most Th1-type and innate immune mediators rose above pretreatment levels. Challenge of human immune cells with M. tuberculosis in vitro up-regulated these immune modulators as well. The observed low levels of NO synthase-2 produced by alveolar macrophages at TB diagnosis, along with the heightened amounts of suppressive mediators, support the conclusion that M. tuberculosis actively promotes down-modulatory mediators to counteract Th1-type and innate immunity as an immunopathological strategy. Our data highlight the potential application of immune mediators as surrogate markers for TB diagnosis or treatment response.


Subject(s)
Down-Regulation/immunology , Lung/immunology , Lung/pathology , Th1 Cells/immunology , Th1 Cells/pathology , Tuberculosis, Pulmonary/immunology , Tuberculosis, Pulmonary/pathology , Adult , Bronchoalveolar Lavage Fluid/cytology , Bronchoalveolar Lavage Fluid/immunology , Bronchoalveolar Lavage Fluid/microbiology , Cells, Cultured , Down-Regulation/genetics , Female , Gene Expression Regulation/immunology , Humans , Inflammation Mediators/antagonists & inhibitors , Inflammation Mediators/metabolism , Lung/metabolism , Male , Middle Aged , Sputum/immunology , Sputum/microbiology , Th1 Cells/microbiology , Tuberculosis, Pulmonary/genetics , Young Adult
15.
BMC Infect Dis ; 9: 23, 2009 Feb 28.
Article in English | MEDLINE | ID: mdl-19250549

ABSTRACT

BACKGROUND: Immune responses to Mycobacterium tuberculosis antigens could serve as surrogate markers of treatment response. METHODS: Using the T-SPOT.TB assay and frozen peripheral blood mononuclear cells, we enumerated ESAT-6- and CFP-10-specific IFN-gamma-producing T cells over time in pulmonary TB patients receiving directly observed treatment. T cell responses (measured as "spot forming cells" or "SFCs") were assessed prior to treatment and at 16 and 24 weeks of treatment. RESULTS: 58 patients were evaluated, of whom 57 were HIV seronegative. Mean (SD) ESAT-6, CFP-10, and summed RD1 specific SFCs declined from 42.7 (72.7), 41.2 (66.4), and 83.8 (105.7) at baseline to 23.3 (39.4, p = 0.01), 23.2 (29.4, p = 0.18), and 46.5 (59.5, p = 0.02) at completion of 24 weeks of treatment, respectively. Only 10% of individuals with a baseline reactive test reverted to negative at treatment week 24. For the group that was culture positive at completion of 8 weeks of treatment compared to the culture negative group, the incidence rate ratio (IRR) of ESAT-6, CFP-10, and summed RD1 specific SFC counts were, respectively, 2.23 (p = 0.048), 1.51 (p = 0.20), and 1.83 (p = 0.047). Patients with cavitary disease had mean ESAT-6 specific SFC counts that were higher than those without cavitary disease (IRR 2.08, p = 0.034). CONCLUSION: IFN-gamma-producing RD1-specific T cells, as measured in the T-SPOT.TB assay, may be directly related to bacterial load in patients undergoing treatment for pulmonary TB. However, high inter-subject variability in quantitative results coupled with failure of reversion to negative of qualitative results in most subjects at treatment completion may limit the utility of this assay as a surrogate marker for treatment efficacy.


Subject(s)
Enzyme-Linked Immunosorbent Assay/methods , Mycobacterium tuberculosis/immunology , T-Lymphocytes/immunology , Tuberculosis, Pulmonary/drug therapy , Adult , Antigens, Bacterial/metabolism , Bacterial Proteins/metabolism , Cell Count , Double-Blind Method , Female , Humans , Interferon-gamma/metabolism , Longitudinal Studies , Male , Predictive Value of Tests , T-Lymphocytes/metabolism , Treatment Outcome , Tuberculosis, Pulmonary/immunology , Young Adult
17.
J Clin Microbiol ; 45(12): 3891-902, 2007 Dec.
Article in English | MEDLINE | ID: mdl-17898156

ABSTRACT

The current study evaluated Mycobacterium tuberculosis isolates from Rio de Janeiro, Brazil, for genomic deletions. One locus in our panel of PCR targets failed to amplify in approximately 30% of strains. A single novel long sequence polymorphism (>26.3 kb) was characterized and designated RD(Rio). Homologous recombination between two similar protein-coding genes is proposed as the mechanism for deleting or modifying 10 genes, including two potentially immunogenic PPE proteins. The flanking regions of the RD(Rio) locus were identical in all strains bearing the deletion. Genetic testing by principal genetic group, spoligotyping, variable-number tandem repeats of mycobacterial interspersed repetitive units (MIRU-VNTR), and IS6110-based restriction fragment length polymorphism analysis cumulatively support the idea that RD(Rio) strains are derived from a common ancestor belonging solely to the Latin American-Mediterranean spoligotype family. The RD(Rio) lineage is therefore the predominant clade causing tuberculosis (TB) in Rio de Janeiro and, as indicated by genotypic clustering in MIRU-VNTR analysis, the most significant source of recent transmission. Limited retrospective reviews of bacteriological and patient records showed a lack of association with multidrug resistance or specific risk factors for TB. However, trends in the data did suggest that RD(Rio) strains may cause a form of TB with a distinct clinical presentation. Overall, the high prevalence of this genotype may be related to enhanced virulence, transmissibility, and/or specific adaptation to a Euro-Latin American host population. The identification of RD(Rio) strains outside of Brazil points to the ongoing intercontinental dissemination of this important genotype. Further studies are needed to determine the differential strain-specific features, pathobiology, and worldwide prevalence of RD(Rio) M. tuberculosis.


Subject(s)
Mycobacterium tuberculosis/classification , Mycobacterium tuberculosis/genetics , Polymorphism, Genetic , Tuberculosis/epidemiology , Tuberculosis/microbiology , Animals , Brazil/epidemiology , Cluster Analysis , DNA Fingerprinting , DNA Transposable Elements/genetics , DNA, Bacterial/genetics , Genotype , Humans , Minisatellite Repeats/genetics , Mycobacterium tuberculosis/isolation & purification , Mycobacterium tuberculosis/pathogenicity , Phylogeny , Polymerase Chain Reaction/methods , Polymorphism, Restriction Fragment Length , Recombination, Genetic , Sequence Deletion , Tuberculosis/pathology , Tuberculosis/physiopathology
18.
Microbiology (Reading) ; 151(Pt 1): 323-332, 2005 Jan.
Article in English | MEDLINE | ID: mdl-15632449

ABSTRACT

Pathogenic mycobacteria survive within phagosomes which are thought to represent a nutrient-restricted environment. Divalent cation transporters of the Nramp family in phagosomes and mycobacteria (Mramp) may compete for metals that are crucial for bacterial survival. The elemental concentrations in phagosomes of macrophages infected with wild-type Mycobacterium tuberculosis (M. tuberculosis strain H37Rv) and a M. tuberculosis Mramp knockout mutant (Mramp-KO), derived from a clinical isolate isogenic to the strain MT103, were compared. Time points of 1 and 24 h after infection of mouse peritoneal macrophages (bcg(S)) were compared in both cases. Increased concentrations of P, Ni and Zn and reduced Cl concentration in Mramp-KO after 1 h of infection were observed, compared to M. tuberculosis vacuoles. After 24 h of infection, significant differences in the P, Cl and Zn concentrations were still present. The Mramp-KO phagosome showed a significant increase of P, Ca, Mn, Fe and Zn concentrations between 1 and 24 h after infection, while the concentrations of K and Ni decreased. In the M. tuberculosis vacuole, the Fe concentration showed a similar increase, while the Cl concentration decreased. The fact that the concentration of several divalent cations increased in the Mramp-KO strain suggests that Mramp may have no impact on the import of these divalent cations into the mycobacterium, but may function as a cation efflux pump. The concordant increase of Fe concentrations within M. tuberculosis, as well as within the Mramp-KO vacuoles, implies that Mramp, in contrast to siderophores, might not be important for the attraction of Fe and its retention in phagosomes of unstimulated macrophages.


Subject(s)
Cation Transport Proteins/metabolism , Cations, Divalent/metabolism , Macrophages, Peritoneal/microbiology , Mycobacterium tuberculosis/metabolism , Phagosomes/metabolism , Animals , Cation Transport Proteins/genetics , Gene Deletion , Humans , Ion Transport , Mice , Mice, Inbred C57BL , Mycobacterium tuberculosis/genetics
19.
Mem. Inst. Oswaldo Cruz ; 99(7): 749-752, Nov. 2004. ilus
Article in English | LILACS | ID: lil-391606

ABSTRACT

Transmission of Mycobacterium bovis from cattle to humans has been reported and can cause tuberculosis (Tb) and a problem in certain risk populations. Therefore, knowledge of resistance of M. bovis towards antibiotics used for therapy of human Tb could help avoiding cure delay and treatment cost increase when dealing with drug resistant organisms. We therefore evaluated the susceptibility of M. bovis isolates towards streptomycin, isoniazide, rifampicin, ethambutol, and ethionamide, the first line antibiotics for human Tb. Therefore, 185 clinical samples from cattle with clinical signs of tuberculosis were processed and submitted to culturing and bacterial isolates to identification and drug susceptibility testing using the proportion method. Among 89 mycobacterial strains, 65 were identified as M. bovis and none were resistant to any of the antibiotics used. Confirmation of present results by future studies, enrolling a large number of isolates and designed to properly represent Brazilian regions, may favor the idea of using isoniazide preventive therapy as part of a Tb control strategy in special situations. Also, nucleic acids from bacterial isolates were submitted to rifoligotyping, a recently described reverse hybridization assay for detection of mutations causing resistance towards rifampicin. Concordance between the conventional and the molecular test was 100 percent, demonstrating the use of such methodology for rapid evaluation of drug susceptibility in M. bovis.


Subject(s)
Humans , Animals , Cattle , Antitubercular Agents , Microbial Sensitivity Tests , Mycobacterium bovis , Retrospective Studies
20.
J. bras. pneumol ; 30(4): 388-394, jul.-ago. 2004.
Article in Portuguese | LILACS | ID: lil-383150

ABSTRACT

O ressurgimento da tuberculose como uma das doenças contagiosas que mais assola a humanidade deu-se após uma falsa impressão de que se caminhava para o seu controle antes do final do Século XX. Nos últimos dez anos, em associação com centros de pesquisas norte-americanos e europeus, nosso grupo na Universidade Federal do Rio de Janeiro tem estudado diversos aspectos relacionados com a patogenia da forma pulmonar, a mais importante por conta de sua freqüência e importância que tem no ciclo de transmissão. Nossa hipótese é que o estabelecimento da infecção latente e o desenvolvimento da forma ativa dependem de um desequilíbrio entre citocinas ativadoras e desativadoras da função microbicida dos macrófagos. A despeito da presença de mecanismos habitualmente protetores, como de moléculas nos macrófagos que denotam ativação celular e de moléculas comprometidas com a proteção contra a tuberculose, como o óxido nítrico e o interferon-g, a tuberculose progride. Um dos motivos é a presença no sítio de infecção de moléculas como a interleucina-10 e o TGF-b, que tem capacidade de desativar macrófagos previamente ativados. Existem evidências que a micobactéria secreta proteínas capazes de induzir a expressão de interleucina-10, agindo assim para burlar os mecanismos de defesa. Indivíduos suscetíveis teriam mais capacidade de responder a estas moléculas da micobactéria, devido a mutações genéticas que facilitam a produção de interleucina-10. A compreensão destes mecanismos poderá representar avanços na prevenção e descoberta de novos alvos terapêuticos para o controle da tuberculose.


Subject(s)
Humans , Communicable Diseases, Emerging , Cytokines/immunology , Tuberculosis, Pulmonary/etiology , Tuberculosis, Pulmonary/immunology
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