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1.
Trop Med Infect Dis ; 9(5)2024 May 08.
Article in English | MEDLINE | ID: mdl-38787041

ABSTRACT

The gut microbiome reflects health and predicts possible disease in hosts. A holistic view of this community is needed, focusing on identifying species and dissecting how species interact with their host and each other, regardless of whether their presence is beneficial, inconsequential, or detrimental. The distribution of gut-associated eukaryotes within and across non-human primates is likely driven by host behavior and ecology. To ascertain the existence of free-living amoebae (FLA) in the gut of wild and captive non-human primates, 101 stool samples were collected and submitted to culture-dependent microscopy examination and DNA sequencing. Free-living amoebae were detected in 45.4% (46/101) of fecal samples analyzed, and their morphological characteristics matched those of Acanthamoeba spp., Vermamoeba spp., heterolobosean amoeboflagellates and fan-shaped amoebae of the family Vannellidae. Sequence analysis of the PCR products revealed that the suspected amoebae are highly homologous (99% identity and 100% query coverage) with Acanthamoeba T4 genotype and Vermamoeba vermiformis amoebae. The results showed a great diversity of amoebae in the non-human primate's microbiome, which may pose a potential risk to the health of NHPs. To our knowledge, this is the first report of free-living amoebae in non-human primates that are naturally infected. However, it is unknown whether gut-borne amoebae exploit a viable ecological niche or are simply transient residents in the gut.

2.
Front Cell Infect Microbiol ; 12: 860442, 2022.
Article in English | MEDLINE | ID: mdl-35548465

ABSTRACT

Parasitic infections caused by protozoans that infect the mucosal surfaces are widely neglected worldwide. Collectively, Entamoeba histolytica, Giardia lamblia, Cryptosporidium spp. and Trichomonas vaginalis infect more than a billion people in the world, being a public health problem mainly in developing countries. However, the exact incidence and prevalence data depend on the population examined. These parasites ultimately cause pathologies that culminate in liver abscesses, malabsorption syndrome, vaginitis, and urethritis, respectively. Despite this, the antimicrobial agents currently used to treat these diseases are limited and often associated with adverse side effects and refractory cases due to the development of resistant parasites. The paucity of drug treatments, absence of vaccines and increasing problems of drug resistance are major concerns for their control and eradication. Herein, potential candidates are reviewed with the overall aim of determining the knowledge gaps and suggest future perspectives for research. This review focuses on this public health problem and focuses on the progress of drug repositioning as a potential strategy for the treatment of mucosal parasites.


Subject(s)
Cryptosporidiosis , Cryptosporidium , Entamoeba histolytica , Giardia lamblia , Parasites , Animals , Cryptosporidiosis/epidemiology , Feces/parasitology , Female , Humans , Mucous Membrane
3.
PLoS One ; 16(8): e0255087, 2021.
Article in English | MEDLINE | ID: mdl-34343188

ABSTRACT

Intestinal cryptosporidiosis is a diarrheal disease caused by protists of genus Cryptosporidium that infect a wide variety of hosts, primarily vertebrates. Due to the close contact between humans and their companion animals, especially dogs and cats, there is concern about the potential for zoonotic transmission of this enteric protozoan parasite by infected animals. This study aimed to perform a microscopic and molecular diagnosis of Cryptosporidium spp. in fecal samples from domiciled dogs and cats. One hundred and nineteen fecal samples were processed using sugar centrifugal flotation followed by molecular detection of Cryptosporidium spp. DNA using nested PCR. Subtyping of isolates positive for C. parvum was performed by sequence analysis of the 60 kDa glycoprotein gene (GP60). Cryptosporidium oocysts were detected in 7.8% (5/64) and 5.4% (3/55) of the fecal samples from dogs and cats, respectively. Cryptosporidium canis (n = 3) and C. parvum (n = 2) were the main species found in dogs, whereas C. felis (n = 3) was prevalent in cats. Subtype IIaA17G2R2 (potentially zoonotic) was identified in samples positive for C. parvum. Despite the low prevalence of Cryptosporidium observed in the domiciled dogs and cats, the presence of potentially zoonotic C. parvum in dogs evidences a public health concern. Further research is needed to better understand the epidemiology, source, and potential impacts of Cryptosporidium infection in cats and dogs.


Subject(s)
Cats/parasitology , Cryptosporidium/physiology , Dogs/parasitology , Zoonoses/epidemiology , Zoonoses/parasitology , Animals , Brazil/epidemiology , Feces/parasitology , Female , Genotype , Geography , Likelihood Functions , Male , Phylogeny
4.
Biota Neotrop. (Online, Ed. ingl.) ; 21(2): e20201016, 2021. tab, graf
Article in English | LILACS-Express | LILACS | ID: biblio-1278408

ABSTRACT

Abstract: Benthic macroinvertebrates Functional Feeding Group (FFG) have been used to determine aquatic assemblage dynamics and as a biomonitoring tool. The main goals of this study were to assess the effects of stream variables on the abundance and richness of FFGs and evaluate ecosystem attributes (FFG ratios) as a tool to assess ecological conditions of Atlantic Rainforest streams. We sampled 146 sites with different impairment conditions in Rio de Janeiro, Brazil. Richness was significantly different among impairment conditions for all FFGs. Mixed-effect models show that aquatic macroinvertebrate FFGs differed in their responses to abiotic variables for abundance and richness. Also, they were reduced in the impaired sites when compared to intermediate and reference sites. The FFG ratio indicated significant differences along the impairment gradient. The FFG ratio analysis was shown to be a fast and cheap tool that can be used for monitoring aquatic ecosystems in the Atlantic Forest biome. However, further studies are required to calibrate the method specifically for the Atlantic Forest region.


Resumo: Os Grupos Funcionais de Alimentação (GFA) são utilizados para determinar a dinâmica da comunidade de macroinvertebrados bentônicos e como uma ferramenta de biomonitoramento. Os principais objetivos deste estudo foram: avaliar os efeitos de variáveis de riacho na abundância e riqueza de GFAs e os atributos do ecossistema (razão GFA) como uma ferramenta para avaliar as condições ecológicas dos córregos da Mata Atlântica. Foram amostrados 146 locais com diferentes condições de impacto no Rio de Janeiro, Brasil. A riqueza foi significativamente diferente com as condições de impacto entre todos os GFA. Os modelos de efeito misto mostraram que os GFA diferiam em suas respostas às variáveis abióticas quanto à abundância e riqueza. Além disso, eles diferem nas áreas impactadas quando comparados as áreas intermediária e de referência. A razão de GFA encontrou diferenças significativas ao longo do gradiente de impacto. A análise da razão de GFA evidenciou-se uma ferramenta rápida e barata, com potencial para ser utilizada no monitoramento de ecossistemas aquáticos no bioma Mata Atlântica. No entanto, mais estudos serão necessários para calibrar o método especificamente para a região da Mata Atlântica.

5.
PLoS One ; 14(1): e0210740, 2019.
Article in English | MEDLINE | ID: mdl-30682075

ABSTRACT

The enteric protist Blastocystis is one of the most frequently reported parasites infecting both humans and many other animal hosts worldwide. A remarkable genetic diversity has been observed in the species, with 17 different subtypes (STs) on a molecular phylogeny based on small subunit RNA genes (SSU rDNA). Nonetheless, information regarding its distribution, diversity and zoonotic potential remains still scarce, especially in groups other than primates. In Brazil, only a few surveys limited to human isolates have so far been conducted on Blastocystis STs. The aim of this study is to determine the occurrence of Blastocystis subtypes in non-human vertebrate and invertebrate animal groups in different areas of the state of Rio de Janeiro, Brazil. A total of 334 stool samples were collected from animals representing 28 different genera. Blastocystis cultivated samples were subtyped using nuclear small subunit ribosomal DNA (SSU rDNA) sequencing. Phylogenetic analyses and BLAST searches revealed six subtypes: ST5 (28.8%), ST2 (21.1%), ST1 and ST8 (19.2%), ST3 (7.7%) and ST4 (3.8%). Our findings indicate a considerable overlap between STs in humans and other animals. This highlights the importance of investigating a range of hosts for Blastocystis to understand the eco-epidemiological aspects of the parasite and its host specificity.


Subject(s)
Blastocystis/classification , Blastocystis/genetics , Animals , Brazil , DNA, Protozoan/genetics , DNA, Ribosomal/genetics , Molecular Epidemiology/methods , Phylogeny
6.
PLoS One ; 13(3): e0193860, 2018.
Article in English | MEDLINE | ID: mdl-29522552

ABSTRACT

BACKGROUND: Intestinal parasitic infections are considered a serious public health problem and widely distributed worldwide, mainly in urban and rural environments of tropical and subtropical countries. Globally, soil-transmitted helminths and protozoa are the most common intestinal parasites. Blastocystis sp. is a highly prevalent suspected pathogenic protozoan, and considered an unusual protist due to its significant genetic diversity and host plasticity. METHODOLOGY/MAIN FINDINGS: A total of 294 stool samples were collected from inhabitants of three rural valleys in Rio de Janeiro, Brazil. The stool samples were evaluated by parasitological methods, fecal culture, nested PCR and PCR/Sequencing. Overall prevalence by parasitological analyses was 64.3% (189 out of 294 cases). Blastocystis sp. (55.8%) was the most prevalent, followed by Endolimax nana (18.7%), Entamoeba histolytica complex (7.1%), hookworm infection (7.1%), Entomoeba coli (5.8%), Giardia intestinalis (4.1%), Iodamoeba butchilii (1.0%), Trichuris trichiura (1.0%), Pentatrichomonas hominis (0.7%), Enterobius vermicularis (0.7%), Ascaris lumbricoides (0.7%) and Strongyloides stercoralis (0.7%). Prevalence of IPIs was significantly different by gender. Phylogenetic analysis of Blastocystis sp. and BLAST search revealed five different subtypes: ST3 (34.0%), ST1 (27.0%), ST2 (27.0%), ST4 (3.5%), ST8 (7.0%) and a non-identified subtype. CONCLUSIONS/SIGNIFICANCE: Our findings demonstrate that intestinal parasite infection rates in rural areas of the Sumidouro municipality of Rio de Janeiro, Brazil are still high and remain a challenge to public health. Moreover, our data reveals significant genetic heterogeneity of Blastocystis sp. subtypes and a possible novel subtype, whose confirmation will require additional data. Our study contributes to the understanding of potential routes of transmission, epidemiology, and genetic diversity of Blastocystis sp. in rural areas both at a regional and global scale.


Subject(s)
Blastocystis Infections/epidemiology , Blastocystis/isolation & purification , Intestinal Diseases, Parasitic/epidemiology , Adolescent , Adult , Aged , Aged, 80 and over , Animals , Base Sequence , Blastocystis/classification , Blastocystis/genetics , Blastocystis Infections/parasitology , Brazil/epidemiology , Child , Child, Preschool , Cross-Sectional Studies , DNA, Protozoan/genetics , DNA, Protozoan/isolation & purification , Feces/parasitology , Female , Genetic Variation , Helminthiasis/epidemiology , Helminthiasis/parasitology , Humans , Intestinal Diseases, Parasitic/parasitology , Male , Middle Aged , Phylogeny , Polymerase Chain Reaction , Prevalence , Protozoan Infections/epidemiology , Protozoan Infections/parasitology , Ribotyping , Rural Population , Sequence Alignment , Sequence Analysis, DNA , Sequence Homology, Nucleic Acid , Young Adult
7.
Mem. Inst. Oswaldo Cruz ; 110(8): 956-965, Dec. 2015. graf
Article in English | LILACS | ID: lil-769828

ABSTRACT

The class Kinetoplastea encompasses both free-living and parasitic species from a wide range of hosts. Several representatives of this group are responsible for severe human diseases and for economic losses in agriculture and livestock. While this group encompasses over 30 genera, most of the available information has been derived from the vertebrate pathogenic genera Leishmaniaand Trypanosoma. Recent studies of the previously neglected groups of Kinetoplastea indicated that the actual diversity is much higher than previously thought. This article discusses the known segment of kinetoplastid diversity and how gene-directed Sanger sequencing and next-generation sequencing methods can help to deepen our knowledge of these interesting protists.


Subject(s)
Biodiversity , DNA, Protozoan/genetics , High-Throughput Nucleotide Sequencing/methods , Kinetoplastida/genetics , Phylogeny , RNA, Protozoan/genetics , Biomarkers , Computational Biology , Databases, Genetic , DNA Barcoding, Taxonomic/trends , Environment , Kinetoplastida/classification , Kinetoplastida/cytology , Metagenomics/trends , /genetics
8.
Mem Inst Oswaldo Cruz ; 110(8): 956-65, 2015 Dec.
Article in English | MEDLINE | ID: mdl-26602872

ABSTRACT

The class Kinetoplastea encompasses both free-living and parasitic species from a wide range of hosts. Several representatives of this group are responsible for severe human diseases and for economic losses in agriculture and livestock. While this group encompasses over 30 genera, most of the available information has been derived from the vertebrate pathogenic genera Leishmaniaand Trypanosoma. Recent studies of the previously neglected groups of Kinetoplastea indicated that the actual diversity is much higher than previously thought. This article discusses the known segment of kinetoplastid diversity and how gene-directed Sanger sequencing and next-generation sequencing methods can help to deepen our knowledge of these interesting protists.


Subject(s)
Biodiversity , DNA, Protozoan/genetics , High-Throughput Nucleotide Sequencing/methods , Kinetoplastida/genetics , Phylogeny , RNA, Protozoan/genetics , Biomarkers , Computational Biology , DNA Barcoding, Taxonomic/trends , Databases, Genetic , Environment , Kinetoplastida/classification , Kinetoplastida/cytology , Metagenomics/trends , RNA, Ribosomal, 18S/genetics
9.
Am J Trop Med Hyg ; 93(5): 994-7, 2015 Nov.
Article in English | MEDLINE | ID: mdl-26350453

ABSTRACT

We used the gut contents of triatomines collected from rural areas of Ceará State, northeastern Brazil, to identify their putative hosts via vertebrate cytb gene sequencing. Successful direct sequencing was obtained for 48% of insects, comprising 50 Triatoma brasiliensis, 7 Triatoma pseudomaculata, and 1 Rhodnius nasutus. Basic local alignment search tool (BLAST) procedure revealed that domestic animals, such as chickens (Gallus gallus) and goats (Capra hircus), are the main food source, including in sylvatic environment. Native hosts were also detected in peridomestic environment such as reptiles (Tropidurus sp. and Iguana iguana) and the Galea spixii (Rodentia: Caviidae). The role of goats and Galea spixii in Chagas disease epidemiology calls for further studies, because these mammals likely link the sylvatic and domestic Trypanosoma cruzi cycles.


Subject(s)
Chagas Disease/epidemiology , Disease Reservoirs/veterinary , Feeding Behavior/physiology , Goats/blood , Rodentia/blood , Triatominae/physiology , Animals , Brazil/epidemiology , Chagas Disease/transmission , Cytochromes b/genetics , Cytochromes b/isolation & purification , DNA/genetics , Disease Reservoirs/parasitology , Humans
10.
Parasit Vectors ; 7: 207, 2014 Apr 29.
Article in English | MEDLINE | ID: mdl-24779380

ABSTRACT

BACKGROUND: Blastocystis sp. is one of the most prevalent parasites found in human stool and has been recently considered an opportunistic emerging pathogen in immunocompromised individuals. However, cases of invasive intestinal infections and skin rashes have been attributed to infection by Blastocystis sp in immunocompetent individuals, suggesting that it is an emerging parasite with pathogenic potential. FINDINGS: We present a case of a 22 year old female patient who complained of pain in the left hypochondrium. Ultrasonography and abdominal computed tomography scans showed two splenic cysts. The cyst fluid analysis demonstrated numerous Blastocystis sp.; PCR and DNA sequencing analyses confirmed the presence of Blastocystis subtype 3. CONCLUSIONS: This is, to our knowledge, the first case report of the presence of Blastocystis subtype 3 in extra-intestinal organs and is strong evidence that Blastocystis sp. is potentially pathogenic and invasive. However, further studies are required to determine the pathogenicity of the parasite.


Subject(s)
Blastocystis Infections/pathology , Blastocystis , Splenic Diseases/parasitology , Blastocystis/genetics , Female , Humans , Molecular Sequence Data , Phylogeny , RNA, Ribosomal/genetics , Young Adult
11.
Rev Bras Parasitol Vet ; 23(1): 74-9, 2014 Mar.
Article in English | MEDLINE | ID: mdl-24728364

ABSTRACT

Three new sequences of Mitochondrial cytochrome c-oxidase subunit 2 (mtDNA cox-2) from C. pelagicum parasite of Spheniscus magellanicus, the Magelanicus penguin, were determined from Brazilian waters. The sequences presented 99 and 98% of similarity with C. pelagicum sequences from Argentina, deposited on GenBank for the same genetic region and with a strong statistical support inferred from the phylogenetic tree. The morphological and ultrastructural studies that were carried out confirmed the genetic analysis.


Subject(s)
Ascaridoidea/anatomy & histology , Ascaridoidea/genetics , Spheniscidae/parasitology , Animals , Ascaridoidea/physiology , Base Sequence , Brazil , DNA, Mitochondrial/analysis , Electron Transport Complex IV/genetics , Female , Male
12.
Rev. bras. parasitol. vet ; 23(1): 74-79, Jan-Mar/2014. tab, graf
Article in English | LILACS | ID: lil-707186

ABSTRACT

Three new sequences of Mitochondrial cytochrome c-oxidase subunit 2 (mtDNA cox-2) from C. pelagicum parasite of Spheniscus magellanicus, the Magelanicus penguin, were determined from Brazilian waters. The sequences presented 99 and 98% of similarity with C. pelagicum sequences from Argentina, deposited on GenBank for the same genetic region and with a strong statistical support inferred from the phylogenetic tree. The morphological and ultrastructural studies that were carried out confirmed the genetic analysis.


Foram determinadas três novas sequências da região do Citocromo c-oxidase da subunidade II do DNA mitocondrial (cox-2 mtDNA) de Contracaecum pelagicum, parasito de Spheniscus magellanicus, pinguim Magalhães, de águas brasileiras. As sequências apresentaram 99 e 98% de similaridade com sequências de C. pelagicum da Argentina depositadas no GenBank da mesma região genética com forte suporte estatístico inferido pela arvore filogenética. Estudos morfológicos e ultraestruturais realizados confirmaram a identidade genética.


Subject(s)
Animals , Female , Male , Ascaridoidea/anatomy & histology , Ascaridoidea/genetics , Spheniscidae/parasitology , Ascaridoidea/physiology , Base Sequence , Brazil , DNA, Mitochondrial/analysis , Electron Transport Complex IV/genetics
13.
Rev. Soc. Bras. Med. Trop ; 47(1): 101-104, Jan-Feb/2014. tab
Article in English | LILACS | ID: lil-703150

ABSTRACT

Introduction: This study evaluated the frequency of intestinal parasites, emphasizing the identification and differentiation of Entamoeba spp. Methods: Multiplex polymerase chain reaction (PCR), coproantigen tests and morphometric analysis were performed for Entamoeba spp. differentiation. Results: The overall frequency of intestinal parasites was 65%. Entamoeba histolytica was detected by the coproantigen test, and the PCR showed that Entamoeba dispar predominated in the population. In contrast, morphometric analysis was important for identifying Entamoeba hartmanni. Conclusions: It is possible to identify the causative agent of amoebiasis and to differentiate this agent from other species by combining techniques. .


Subject(s)
Adolescent , Adult , Child , Child, Preschool , Female , Humans , Infant , Male , Middle Aged , Young Adult , Entamoeba/classification , Entamoebiasis/epidemiology , Feces/parasitology , Brazil/epidemiology , DNA, Protozoan/analysis , Enzyme-Linked Immunosorbent Assay , Entamoeba/genetics , Entamoeba/immunology , Entamoebiasis/diagnosis , Entamoebiasis/parasitology , Multiplex Polymerase Chain Reaction
14.
Parasit Vectors ; 6: 69, 2013 Mar 15.
Article in English | MEDLINE | ID: mdl-23497666

ABSTRACT

BACKGROUND: Six species of the genus Entamoeba, i.e., E. histolytica, E. dispar, E. moshkovskii, E. polecki, E. coli, and E. hartmanii can be found in human stools. Among these, only E. histolytica is considered to be pathogenic, causing intestinal and extra-intestinal disease, but it is morphologically identical to E. dispar and E. moshkovskii. In general, E. polecki, E. coli, and E. hartmanii can be differentiated morphologically from E. histolytica, but some of their diagnostic morphologic features may overlap creating issues for the differential diagnosis. Moreover, the previous inability to differentiate among Entamoeba species has limited epidemiologic information on E histolytica. The objective of this study was to develop a rapid, high-throughput screening method using Luminex technique for the simultaneous detection and differentiation of Entamoeba species. METHODS: PCR amplification was performed with biotinylated Entamoeba sp 18S rRNA gene primers, designed to amplify a fragment ranging from 382 to 429 bp of the Entamoeba spp studied. Regions of this fragment that could differentiate among E. histolytica, E. moshkovskii, E. dispar, E. hartmanii and E. coli were selected to design hybridization probes to link to Luminex beads. The assay was standardized with cloned DNA samples of each species and evaluated with 24 DNA extracts from samples obtained from individuals diagnosed with these amebas in their stools. RESULTS: Using this approach we were able to correctly identify E. histoltyica, E. dispar, E hartmanni, E. coli and E. moshkovskii in all specimens studied. From twenty four samples tested by microscopy, PCR/DNA Sequencing and real-time PCR, 100% agreed with PCR-Luminex assay for identification of E. dispar, E. moshkovskii, E. hartmanni, E. histolytica, and E. coli. CONCLUSION: These results show that this method could be used in the diagnostic detection of Entamoeba spp in fecal samples. This diagnostic test was useful to clearly distinguish E histolytica from other species and also to strengthen epidemiologic data on Entamoeba spp.


Subject(s)
Entamoeba/isolation & purification , Entamoebiasis/diagnosis , Feces/parasitology , Mass Screening/methods , Molecular Diagnostic Techniques/methods , Parasitology/methods , DNA, Protozoan/genetics , Entamoeba/classification , Entamoeba/genetics , Entamoebiasis/parasitology , Forensic Anthropology , Humans , Nucleic Acid Hybridization , Oligonucleotide Probes/genetics , RNA, Ribosomal, 18S/genetics
15.
Exp Parasitol ; 134(1): 39-47, 2013 May.
Article in English | MEDLINE | ID: mdl-23380037

ABSTRACT

It has been claimed that amoebic molecules such as amoebapore, galactose/N-acetyl galactosamine inhibitable lectin, and cysteine proteases are responsible for host tissue destruction and are present in both pathogenic Entamoeba histolytica and non-pathogenic Entamoeba dispar. Some reports have provided evidence that after infection with E. dispar, pathological changes may occur in some humans. The aim of this study was to evaluate E. dispar pathogenicity by comparing it to the pathogenicity of E. histolytica through liver abscesses induced in hamsters. Syrian golden hamsters were challenged by intrahepatic inoculation with the 03C E. dispar strain or with two strains of E. histolytica (HM1:IMSS and EGG) to compare their virulence grades. As control groups, we used bacterial flora and Pavlova's modified medium. Lesions were verified at 1, 3 and 6 days after inoculation. Multiplex Polymerase Chain Reaction was performed to characterize each strain using EdP1/EdP2 and EhP1/EhP2 primers. The EGG and HM1:IMSS E. histolytica strains and 03C E. dispar were able to cause liver lesions. The EGG strain caused extensive hepatic abscesses, and trophozoites were found in the lesions throughout the three periods of study. The HM1:IMSS strain caused smaller abscesses when compared to EGG lesions; however, trophozoites were observed at 1 and 3 days after inoculation. The 03C E. dispar strain caused intermediate abscesses when compared to the others; trophozoites were observed in all periods analyzed. The EGG strain caused progressive evolution of the injury, which differed from the HM1:IMSS and 03C strains. These results strongly suggest that the 03C E. dispar strain is pathogenic in the experimental hamster model. Additional studies are necessary to identify potential factors that regulate the manifestation of virulence of this strain and others.


Subject(s)
Entamoeba/pathogenicity , Liver Abscess, Amebic/parasitology , Animals , Body Weight , Brazil , Cricetinae , DNA, Protozoan/chemistry , DNA, Protozoan/isolation & purification , Disease Models, Animal , Entamoeba/classification , Entamoeba/genetics , Female , Humans , Liver/parasitology , Liver/pathology , Liver Abscess, Amebic/pathology , Male , Mesocricetus , Multiplex Polymerase Chain Reaction , Organ Size
16.
PLoS One ; 7(7): e40447, 2012.
Article in English | MEDLINE | ID: mdl-22792329

ABSTRACT

Anisakid nematode larvae from Trichiurus lepturus off coast of Rio de Janeiro were studied using light, laser confocal and scanning electron microscopy, in addition to a molecular approach. Mitochondrial cytochrome c-oxidase subunit 2 (mtDNA cox-2), partial 28S (LSU) and internal transcribed spacers (ITS-1, 5.8S, ITS-2) of ribosomal DNA were amplified using the polymerase chain reaction and sequenced to evaluate the phylogenetic relationships between the nematode taxa. The morphological and genetic profiles confirmed that, of the 1,030 larvae collected from the 64 fish examined, 398 were analysed, of which 361 were Hysterothylacium sp. and 37 were Anisakis typica. Larvae of Hysterothylacium sp. were not identified to the species level due to the absence of similar sequences for adult parasites; however, the ITS sequence clustered in the phylogenetic tree with sequences of H. deardorffoverstreetorum, whereas an mtDNA cox-2 and LSU concatenated phylogenetic analysis demonstrated the presence of two clades, both of them under the same name as the larval H. deardorffoverstreetorum. Data on the occurrence of parasites during the winter and summer months were compared using the t-test. The greatest prevalence and intensity of infection were recorded for larval Hysterothylacium, with a prevalence of 51.56% and an intensity of up to 55 parasites per fish. The larval Anisakis exhibit a higher abundance and intensity of infection in the winter months, and those of Hysterothylacium during the summer. However, the t-test indicated no significant differences between the abundance and intensity of infection recorded during the months of collection for either of these larval nematodes. All sequences generated in this study were deposited in GenBank.


Subject(s)
Anisakiasis/veterinary , Anisakis/anatomy & histology , Fish Diseases/parasitology , Perciformes/parasitology , Animals , Anisakiasis/diagnosis , Anisakiasis/epidemiology , Anisakiasis/parasitology , Anisakis/genetics , Base Sequence , Brazil/epidemiology , Cyclooxygenase 2/genetics , DNA, Mitochondrial/genetics , DNA, Ribosomal Spacer/genetics , Fish Diseases/diagnosis , Fish Diseases/epidemiology , Genes, Helminth , Helminth Proteins/genetics , Larva/anatomy & histology , Larva/genetics , Likelihood Functions , Molecular Diagnostic Techniques , Molecular Sequence Data , Multilocus Sequence Typing , Phylogeny , Prevalence , Sequence Homology, Nucleic Acid
17.
Diagn Microbiol Infect Dis ; 68(4): 416-21, 2010 Dec.
Article in English | MEDLINE | ID: mdl-20884153

ABSTRACT

The aim of the present study was to evaluate polymerase chain reaction (PCR) as an alternative tool for diagnosing schistosomiasis in individuals with low-level parasite burden from areas of low endemicity or under occasional risk of infection by Schistosoma mansoni. A total of 102 samples were tested in this study using 2 PCR assays utilizing distinct primer pairs. One of the primer pairs was targeted to a highly repeated 121-base pair sequence of S. mansoni, and the other was targeted to Schistosoma 28S rDNA. The samples were divided into 4 groups according to parasite burden of the individual as follows: 16 individuals with schistosomiasis excreting less than 10 eggs per gram of feces (EPG), 18 individuals excreting higher than 10 EPG, 22 individuals with reactive IgG-ELISA against S. mansoni soluble membrane antigen and negative coproscopy, and 46 controls samples including 25 individuals with other intestinal parasites and 21 individuals with negative parasitologic examination. The results obtained with stool samples from individuals with schistosomiasis showed a high sensitivity for PCR as S. mansoni DNA was detected in 91% (31/34) of the samples analyzed. No amplification was observed in 3 stool samples from individuals excreting below 10 EPG. The specificity of the test for both pairs of primers was 100%. In the group of seropositive individuals, S. mansoni DNA was detected in 59% (13/22) of fecal samples, corroborating the serologic results. Overall, PCR can be an important tool for detecting S. mansoni infection in individuals excreting few eggs in feces. Moreover, the determination of the infection through the detection of S. mansoni DNA in stool samples from seropositive individuals represents a new means of confirming the results of IgG-ELISA for schistosomiasis. Therefore, studies in this direction should be encouraged and extended.


Subject(s)
DNA, Helminth/analysis , Polymerase Chain Reaction/methods , Schistosoma mansoni/genetics , Schistosomiasis mansoni/diagnosis , Animals , DNA Primers , DNA, Helminth/isolation & purification , Feces/parasitology , Female , Humans , Male , Mice , Parasite Egg Count/methods , Schistosoma mansoni/isolation & purification , Schistosomiasis mansoni/parasitology , Sensitivity and Specificity
18.
Parasitol Res ; 106(4): 883-8, 2010 Mar.
Article in English | MEDLINE | ID: mdl-20169364

ABSTRACT

Entamoeba histolytica is known to cause intestinal and extra-intestinal disease while the other Entamoeba species are not considered to be pathogenic. However, all Entamoeba spp. should be reported when identified in clinical samples. Entamoeba polecki, Entamoeba coli, and Entamoeba hartmanii can be differentiated morphologically from E. histolytica, but some of their diagnostic morphologic features overlap. E. histolytica, Entamoeba dispar, and Entamoeba moshkovskii are morphologically identical but can be differentiated using molecular tools. We developed a polymerase chain reaction (PCR) procedure followed by DNA sequencing of specific regions of 18S rRNA gene to differentiate the Entamoeba spp. commonly found in human stools. This approach was used to analyze 45 samples from cases evaluated for the presence of Entamoeba spp. by microscopy and a real-time PCR method capable of differential detection of E. histolytica and E. dispar. Our results demonstrated an agreement of approximately 98% (45/44) between the real-time PCR for E. histolytica and E. dispar and the 18S rRNA analysis described here. Five previously negative samples by microscopy revealed the presence of E. dispar, E. hartmanii, or E. coli DNA. In addition, we were able to detect E. hartmanii in a stool sample that had been previously reported as negative for Entamoeba spp. by microscopy. Further microscopic evaluation of this sample revealed the presence of E. hartmanii cysts, which went undetected during the first microscopic evaluation. This PCR followed by DNA sequencing will be useful to refine the diagnostic detection of Entamoeba spp. in stool and other clinical specimens.


Subject(s)
DNA, Protozoan/genetics , DNA, Ribosomal/genetics , Entamoeba/classification , Entamoeba/genetics , Parasitology/methods , Polymerase Chain Reaction/methods , RNA, Ribosomal, 18S/genetics , Animals , DNA Primers/genetics , Entamoeba/cytology , Entamoeba/isolation & purification , Feces/parasitology , Humans , Sensitivity and Specificity , Sequence Analysis, DNA
19.
Braz J Infect Dis ; 11(3): 365-70, 2007 Jun.
Article in English | MEDLINE | ID: mdl-17684641

ABSTRACT

Amebiasis is an infection caused by Entamoeba histolytica. However, differentiation between E. histolytica and Entamoeba dispar, which are morphologically identical species, is essential for treatment decision, precaution of the invasive disease and public health. The purpose of the present study was to evaluate a Multiplex -PCR for detection and differentiation of E. histolytica from E. dispar from fresh stool samples in comparison with the coproantigen commercial ELISA. Microscopic examination of stools using the Coprotest method, detection of stool antigen by enzyme-linked immunosorbent assay kit and a home made Multiplex-PCR, were used for the diagnosis of amoebiasis infection. Analysis of the 127 stools samples by microscopy examination demonstrated that only 27 (21%) samples were positive for E. histolytica/E. dispar complex. Among these stool samples, 11 were positive by Multiplex-PCR, with nine presenting the diagnostic fragment characteristic of E. dispar (96 bp) and two presenting diagnostic fragment of E. histolytica (132 bp). Among negative samples detected by microscopic examination, three positive samples for E. dispar and one positive for E. histolytica by Multiplex-PCR was observed. This denotes a low sensibility of microscopic examination when a single stool sample is analyzed. Assay for detection of E. histolytica antigen was concordant with multiplex-PCR in relation to E. histolytica. Statistical analysis comparing the sensibility tests was not done because of the low number of E. histolytica cases. The results demonstrate the importance of the specific techniques use for the differentiation between E. histolytica and E. dispar.


Subject(s)
DNA, Protozoan/analysis , Entamoeba histolytica/genetics , Entamoebiasis/diagnosis , Feces/parasitology , Polymerase Chain Reaction/methods , Animals , Antigens, Protozoan/analysis , DNA, Protozoan/genetics , Diagnosis, Differential , Entamoeba/genetics , Entamoeba/immunology , Entamoeba/isolation & purification , Entamoeba histolytica/immunology , Entamoeba histolytica/isolation & purification , Entamoebiasis/parasitology , Humans , Immunoenzyme Techniques , Reproducibility of Results , Sensitivity and Specificity
20.
Braz. j. infect. dis ; 11(3): 365-370, June 2007. ilus
Article in English | LILACS | ID: lil-457639

ABSTRACT

Amebiasis is an infection caused by Entamoeba histolytica. However, differentiation between E. histolytica and Entamoeba dispar, which are morphologically identical species, is essential for treatment decision, precaution of the invasive disease and public health. The purpose of the present study was to evaluate a Multiplex -PCR for detection and differentiation of E. histolytica from E. dispar from fresh stool samples in comparison with the coproantigen commercial ELISA. Microscopic examination of stools using the Coprotest method, detection of stool antigen by enzyme-linked immunosorbent assay kit and a home made Multiplex-PCR, were used for the diagnosis of amoebiasis infection. Analysis of the 127 stools samples by microscopy examination demonstrated that only 27 (21 percent) samples were positive for E. histolytica/E. dispar complex. Among these stool samples, 11 were positive by Multiplex-PCR, with nine presenting the diagnostic fragment characteristic of E. dispar (96 bp) and two presenting diagnostic fragment of E. histolytica (132 bp). Among negative samples detected by microscopic examination, three positive samples for E. dispar and one positive for E. histolytica by Multiplex-PCR was observed. This denotes a low sensibility of microscopic examination when a single stool sample is analyzed. Assay for detection of E. histolytica antigen was concordant with multiplex-PCR in relation to E. histolytica. Statistical analysis comparing the sensibility tests was not done because of the low number of E. histolytica cases. The results demonstrate the importance of the specific techniques use for the differentiation between E. histolytica and E. dispar.


Subject(s)
Animals , Humans , DNA, Protozoan/analysis , Entamoeba histolytica/genetics , Entamoebiasis/diagnosis , Feces/parasitology , Polymerase Chain Reaction/methods , Antigens, Protozoan/analysis , Diagnosis, Differential , DNA, Protozoan/genetics , Entamoeba histolytica/immunology , Entamoeba histolytica/isolation & purification , Entamoeba/genetics , Entamoeba/immunology , Entamoeba/isolation & purification , Entamoebiasis/parasitology , Immunoenzyme Techniques , Reproducibility of Results , Sensitivity and Specificity
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